TA08609 | signal peptidase, putative

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  • Fasta :-

    >TA08609 MMNFLSRSYSVLHAGAMIGLIALFLNYYTGVNLRTNKHMIGDVKHIKTHELTLDKSKVDR ALIELNMRYDLRGAFDWSTHMIFIYVTANYITNRHERSEVIIFDKIINNKSEAYQPSINI FAKYFLYDFGRSLRNRDISLKFFYELVPIGGFIKQYQLSHNKFTMPKQYTQSS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA08609.fa Sequence name : TA08609 Sequence length : 173 VALUES OF COMPUTED PARAMETERS Coef20 : 4.313 CoefTot : -0.837 ChDiff : 8 ZoneTo : 41 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.812 1.906 0.244 0.744 MesoH : -1.127 0.086 -0.580 0.117 MuHd_075 : 17.583 13.311 5.819 4.429 MuHd_095 : 21.422 12.913 4.862 4.763 MuHd_100 : 19.816 14.770 5.687 4.962 MuHd_105 : 23.343 20.654 7.538 6.422 Hmax_075 : 12.100 9.800 2.156 4.880 Hmax_095 : 6.500 5.162 -1.559 3.019 Hmax_100 : 8.200 16.000 2.943 5.740 Hmax_105 : 13.300 12.600 1.660 4.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4366 0.5634 DFMC : 0.5010 0.4990
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 173 TA08609 MMNFLSRSYSVLHAGAMIGLIALFLNYYTGVNLRTNKHMIGDVKHIKTHELTLDKSKVDRALIELNMRYDLRGAFDWSTH 80 MIFIYVTANYITNRHERSEVIIFDKIINNKSEAYQPSINIFAKYFLYDFGRSLRNRDISLKFFYELVPIGGFIKQYQLSH 160 NKFTMPKQYTQSS 240 ................................................................................ 80 ................................................................................ 160 ............. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA08609 7 MMNFLSR|SY 0.155 . TA08609 34 YTGVNLR|TN 0.080 . TA08609 37 VNLRTNK|HM 0.109 . TA08609 44 HMIGDVK|HI 0.076 . TA08609 47 GDVKHIK|TH 0.064 . TA08609 55 HELTLDK|SK 0.059 . TA08609 57 LTLDKSK|VD 0.059 . TA08609 60 DKSKVDR|AL 0.126 . TA08609 68 LIELNMR|YD 0.078 . TA08609 72 NMRYDLR|GA 0.121 . TA08609 94 ANYITNR|HE 0.087 . TA08609 97 ITNRHER|SE 0.472 . TA08609 105 EVIIFDK|II 0.063 . TA08609 110 DKIINNK|SE 0.070 . TA08609 123 SINIFAK|YF 0.075 . TA08609 131 FLYDFGR|SL 0.115 . TA08609 134 DFGRSLR|NR 0.222 . TA08609 136 GRSLRNR|DI 0.263 . TA08609 141 NRDISLK|FF 0.068 . TA08609 154 PIGGFIK|QY 0.059 . TA08609 162 YQLSHNK|FT 0.073 . TA08609 167 NKFTMPK|QY 0.069 . ____________________________^_________________

  • Fasta :-

    >TA08609 ATGATGAATTTTTTGTCTAGAAGTTATTCAGTATTACATGCTGGTGCTATGATAGGATTA ATAGCATTATTTTTAAATTATTATACTGGTGTTAATTTACGTACTAATAAACATATGATT GGTGATGTTAAACATATCAAAACACATGAACTTACACTTGATAAATCTAAAGTTGATAGA GCATTAATAGAATTGAATATGAGATATGATTTAAGAGGAGCATTTGATTGGAGTACACAT ATGATATTTATATATGTAACAGCAAATTATATAACAAATCGTCATGAAAGAAGTGAAGTA ATAATATTTGATAAAATAATAAATAATAAATCAGAAGCTTATCAACCATCAATTAATATT TTTGCTAAATATTTTCTTTACGATTTTGGTAGATCACTTAGAAATCGTGATATTAGTCTT AAATTCTTTTATGAATTAGTACCAATTGGTGGATTCATTAAACAATATCAACTCTCACAT AATAAATTCACTATGCCAAAACAATATACACAATCATCTTAA
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IDSitePeptideScoreMethod
TA08609139 SNRDISLKFF0.995unsp

TA08609      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India