TA09310 | 26S proteasome ATPase subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA09310OTHER0.9999920.0000030.000005
No Results

  • Fasta :-

    >TA09310 MVEESEITETNSTNVLDENREVINQYIRKVKEHRDLEQKLKQLRIDMIELNKKDMKIEED LKALQSIGQIVGNVLRKIDDNKYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLT IMKILPREVDPIIYNMLNHTNNNRTTGEKKDTNNKSTEEKIGTTEEKDANNRTTEEKIGT TEEKEEEKDTYNSIGGLNKQIKEMREVIELPLKNPFLFKRIGIKPPKGVLLYGPPGTGKT LLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYAKDNQPCIIFIDEIDAIGGR RFSQGTSADREIQRTLMELLTHLDGFDELGQVKIIMATNRPDVLDPALLRPGRIDRKIEI PLPNETARIEILKIHTQKLNIQYPINYNNICKLCDGFNGADMRNICTEAGINAIRNMRDY IIEEDFFKAARKLTENKKLEGTLSYEQV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA09310.fa Sequence name : TA09310 Sequence length : 448 VALUES OF COMPUTED PARAMETERS Coef20 : 3.538 CoefTot : 0.000 ChDiff : -1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.182 1.147 -0.122 0.370 MesoH : -0.790 0.381 -0.375 0.218 MuHd_075 : 27.119 20.558 7.275 5.192 MuHd_095 : 24.569 10.732 6.397 2.590 MuHd_100 : 28.766 14.066 7.453 3.324 MuHd_105 : 22.240 12.675 6.120 2.900 Hmax_075 : -6.067 4.000 -2.632 1.730 Hmax_095 : 3.000 4.100 -1.283 1.850 Hmax_100 : 3.000 4.100 -1.283 1.690 Hmax_105 : 2.800 8.283 -0.698 2.567 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9784 0.0216 DFMC : 0.9681 0.0319
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 448 TA09310 MVEESEITETNSTNVLDENREVINQYIRKVKEHRDLEQKLKQLRIDMIELNKKDMKIEEDLKALQSIGQIVGNVLRKIDD 80 NKYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLTIMKILPREVDPIIYNMLNHTNNNRTTGEKKDTNNKSTEEK 160 IGTTEEKDANNRTTEEKIGTTEEKEEEKDTYNSIGGLNKQIKEMREVIELPLKNPFLFKRIGIKPPKGVLLYGPPGTGKT 240 LLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYAKDNQPCIIFIDEIDAIGGRRFSQGTSADREIQRTLMELL 320 THLDGFDELGQVKIIMATNRPDVLDPALLRPGRIDRKIEIPLPNETARIEILKIHTQKLNIQYPINYNNICKLCDGFNGA 400 DMRNICTEAGINAIRNMRDYIIEEDFFKAARKLTENKKLEGTLSYEQV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA09310 20 NVLDENR|EV 0.087 . TA09310 28 VINQYIR|KV 0.106 . TA09310 29 INQYIRK|VK 0.081 . TA09310 31 QYIRKVK|EH 0.132 . TA09310 34 RKVKEHR|DL 0.219 . TA09310 39 HRDLEQK|LK 0.059 . TA09310 41 DLEQKLK|QL 0.066 . TA09310 44 QKLKQLR|ID 0.083 . TA09310 52 DMIELNK|KD 0.060 . TA09310 53 MIELNKK|DM 0.113 . TA09310 56 LNKKDMK|IE 0.065 . TA09310 62 KIEEDLK|AL 0.061 . TA09310 76 IVGNVLR|KI 0.096 . TA09310 77 VGNVLRK|ID 0.084 . TA09310 82 RKIDDNK|YI 0.071 . TA09310 86 DNKYIVK|AS 0.063 . TA09310 92 KASSGPR|YV 0.129 . TA09310 98 RYVVCCK|VN 0.061 . TA09310 107 IDVNLLK|SG 0.073 . TA09310 111 LLKSGTR|VA 0.080 . TA09310 123 TTLTIMK|IL 0.057 . TA09310 127 IMKILPR|EV 0.155 . TA09310 144 NHTNNNR|TT 0.098 . TA09310 149 NRTTGEK|KD 0.059 . TA09310 150 RTTGEKK|DT 0.112 . TA09310 155 KKDTNNK|ST 0.096 . TA09310 160 NKSTEEK|IG 0.083 . TA09310 167 IGTTEEK|DA 0.075 . TA09310 172 EKDANNR|TT 0.100 . TA09310 177 NRTTEEK|IG 0.072 . TA09310 184 IGTTEEK|EE 0.061 . TA09310 188 EEKEEEK|DT 0.074 . TA09310 199 SIGGLNK|QI 0.069 . TA09310 202 GLNKQIK|EM 0.078 . TA09310 205 KQIKEMR|EV 0.113 . TA09310 213 VIELPLK|NP 0.053 . TA09310 219 KNPFLFK|RI 0.077 . TA09310 220 NPFLFKR|IG 0.164 . TA09310 224 FKRIGIK|PP 0.064 . TA09310 227 IGIKPPK|GV 0.080 . TA09310 239 GPPGTGK|TL 0.057 . TA09310 244 GKTLLAR|AL 0.090 . TA09310 256 LGCNFLK|VV 0.073 . TA09310 265 ASAVVDK|YI 0.104 . TA09310 272 YIGESAK|II 0.074 . TA09310 275 ESAKIIR|EM 0.094 . TA09310 282 EMFGYAK|DN 0.069 . TA09310 300 IDAIGGR|RF 0.097 . TA09310 301 DAIGGRR|FS 0.106 . TA09310 310 QGTSADR|EI 0.077 . TA09310 314 ADREIQR|TL 0.104 . TA09310 333 DELGQVK|II 0.059 . TA09310 340 IIMATNR|PD 0.073 . TA09310 350 LDPALLR|PG 0.071 . TA09310 353 ALLRPGR|ID 0.218 . TA09310 356 RPGRIDR|KI 0.357 . TA09310 357 PGRIDRK|IE 0.071 . TA09310 368 LPNETAR|IE 0.127 . TA09310 373 ARIEILK|IH 0.072 . TA09310 378 LKIHTQK|LN 0.068 . TA09310 392 NYNNICK|LC 0.062 . TA09310 403 FNGADMR|NI 0.102 . TA09310 415 AGINAIR|NM 0.083 . TA09310 418 NAIRNMR|DY 0.365 . TA09310 428 IEEDFFK|AA 0.071 . TA09310 431 DFFKAAR|KL 0.084 . TA09310 432 FFKAARK|LT 0.080 . TA09310 437 RKLTENK|KL 0.067 . TA09310 438 KLTENKK|LE 0.077 . ____________________________^_________________

  • Fasta :-

    >TA09310 ATGGTTGAAGAATCTGAAATAACTGAAACTAATTCTACAAATGTTCTTGATGAAAATCGT GAAGTTATTAATCAATATATTAGAAAAGTTAAAGAACATCGTGATTTAGAACAAAAATTA AAACAACTACGTATTGATATGATAGAATTGAATAAGAAAGATATGAAGATAGAAGAAGAT TTGAAAGCATTACAGAGTATAGGACAGATAGTAGGAAATGTATTACGTAAAATTGATGAT AATAAATATATTGTAAAAGCAAGTTCAGGACCACGTTATGTAGTATGTTGTAAAGTTAAT ATAGATGTGAATTTATTAAAAAGTGGTACAAGAGTAGCACTTGATATGACTACATTAACT ATTATGAAAATATTACCAAGAGAAGTTGATCCAATTATTTATAATATGTTAAATCATACA AATAATAATCGAACTACCGGAGAAAAAAAAGATACAAATAATAAATCTACTGAAGAAAAA ATTGGAACTACTGAAGAAAAAGATGCAAATAATAGAACTACTGAAGAAAAAATTGGAACT ACTGAAGAAAAAGAGGAAGAAAAAGATACATATAATTCTATAGGTGGATTAAATAAACAA ATTAAAGAAATGAGAGAAGTTATTGAATTACCTTTAAAAAATCCTTTTCTATTTAAACGT ATAGGTATTAAACCACCAAAAGGAGTATTATTATATGGACCACCTGGAACGGGTAAAACA TTATTAGCAAGAGCATTAGCAAATGATTTGGGATGTAATTTTCTTAAAGTTGTTGCATCA GCTGTTGTTGATAAATATATCGGCGAATCCGCTAAAATTATACGTGAAATGTTTGGTTAT GCTAAAGATAATCAACCATGTATAATATTTATTGATGAGATAGATGCAATTGGTGGTAGA AGATTTTCACAAGGTACAAGTGCAGATCGTGAAATTCAACGTACATTAATGGAATTATTA ACACATTTGGATGGATTTGATGAATTAGGACAAGTTAAAATTATCATGGCCACTAACAGA CCAGATGTATTAGATCCAGCACTCTTAAGACCAGGAAGAATTGATCGGAAAATTGAAATA CCATTACCCAATGAAACTGCCCGAATCGAAATATTAAAAATACATACACAAAAATTAAAT ATACAATATCCCATCAATTATAATAATATATGTAAATTATGTGATGGATTTAATGGTGCT GATATGAGAAATATATGTACAGAAGCTGGTATAAATGCTATACGTAATATGAGAGATTAT ATAATAGAAGAAGATTTTTTTAAAGCAGCAAGAAAATTAACTGAAAATAAAAAATTAGAA GGTACATTATCATATGAACAAGTCTAA
  • Download Fasta

  • Fasta :-

    MVEESEITETNSTNVLDENREVINQYIRKVKEHRDLEQKLKQLRIDMIELNKKDMKIEED LKALQSIGQIVGNVLRKIDDNKYIVKASSGPRYVVCCKVNIDVNLLKSGTRVALDMTTLT IMKILPREVDPIIYNMLNHTNNNRTTGEKKDTNNKSTEEKIGTTEEKDANNRTTEEKIGT TEEKEEEKDTYNSIGGLNKQIKEMREVIELPLKNPFLFKRIGIKPPKGVLLYGPPGTGKT LLARALANDLGCNFLKVVASAVVDKYIGESAKIIREMFGYAKDNQPCIIFIDEIDAIGGR RFSQGTSADREIQRTLMELLTHLDGFDELGQVKIIMATNRPDVLDPALLRPGRIDRKIEI PLPNETARIEILKIHTQKLNIQYPINYNNICKLCDGFNGADMRNICTEAGINAIRNMRDY IIEEDFFKAARKLTENKKLEGTLSYEQV

    No Results
  • title: ATP binding site
  • coordinates: P234,P235,G236,T237,G238,K239,T240,L241,D292,N339
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA09310156 STNNKSTEEK0.994unspTA09310303 SGRRFSQGTS0.994unsp

TA09310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India