TA09880 | hypothetical protein, conserved

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TA09880OTHER0.7306230.2683230.001054
No Results

  • Fasta :-

    >TA09880 MLIHASVLFFSKLSFNEDSETNVTKPGVYKMEDLPNSLKDSLVDSLKSCLTKLKSDEPSC KLVYSEPFEQNKDKLSEFYPVFSLGFGFNSRGRKHVFIVCGEYEDCSFSFKLFIQNTVLI NLEQSEEDLISKSVLDKTHDQLSKLCSYMTNDINSLSCYVSVSTEKNTQELFLNYFNEFP ESDQKTVTRNSNPRSGNKSNKSKNVKSAPKTENKVKNKDKNKIFNVVPLLEMFGSQFALK LDTTTGALSLALNKELPKVIDKDEENDKNTCLNLVFKFLMSSSSYTESVNYVPFGGTVVP FFDFSSHSNLSLDGVFENSSKLKTVFNPYDLVDKTILVSPHRAINAYPGWISPKKSTVSM VQGNYQYYHYTQMGVNDTGWGCCYRSLQLVCSWYLLGYHTTKLVPTHSKIQEVLKENDVS HKDLKVGSNTWIGTVECGYFLNWYLGYMYKTLYLNDVSEFRNYNVVIADHLKSQGTPVIV GAGAYAYVILGICVESEQGEVAYLIADPHYTGEDSIKNVVNKGGIGWKKVGFLSKASEGK FINLCLPLLEKYGV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA09880.fa Sequence name : TA09880 Sequence length : 554 VALUES OF COMPUTED PARAMETERS Coef20 : 4.037 CoefTot : 0.357 ChDiff : -2 ZoneTo : 16 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.818 2.247 0.514 0.812 MesoH : -0.214 0.418 -0.263 0.318 MuHd_075 : 22.443 2.200 4.528 1.978 MuHd_095 : 6.080 6.616 4.094 2.077 MuHd_100 : 5.105 5.908 3.011 1.751 MuHd_105 : 6.602 6.255 2.845 1.660 Hmax_075 : 19.483 13.183 1.826 5.460 Hmax_095 : 9.100 11.025 0.072 4.323 Hmax_100 : 8.500 13.400 0.510 5.080 Hmax_105 : 11.900 13.400 0.964 5.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9881 0.0119 DFMC : 0.9844 0.0156
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 554 TA09880 MLIHASVLFFSKLSFNEDSETNVTKPGVYKMEDLPNSLKDSLVDSLKSCLTKLKSDEPSCKLVYSEPFEQNKDKLSEFYP 80 VFSLGFGFNSRGRKHVFIVCGEYEDCSFSFKLFIQNTVLINLEQSEEDLISKSVLDKTHDQLSKLCSYMTNDINSLSCYV 160 SVSTEKNTQELFLNYFNEFPESDQKTVTRNSNPRSGNKSNKSKNVKSAPKTENKVKNKDKNKIFNVVPLLEMFGSQFALK 240 LDTTTGALSLALNKELPKVIDKDEENDKNTCLNLVFKFLMSSSSYTESVNYVPFGGTVVPFFDFSSHSNLSLDGVFENSS 320 KLKTVFNPYDLVDKTILVSPHRAINAYPGWISPKKSTVSMVQGNYQYYHYTQMGVNDTGWGCCYRSLQLVCSWYLLGYHT 400 TKLVPTHSKIQEVLKENDVSHKDLKVGSNTWIGTVECGYFLNWYLGYMYKTLYLNDVSEFRNYNVVIADHLKSQGTPVIV 480 GAGAYAYVILGICVESEQGEVAYLIADPHYTGEDSIKNVVNKGGIGWKKVGFLSKASEGKFINLCLPLLEKYGV 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA09880 12 SVLFFSK|LS 0.060 . TA09880 25 SETNVTK|PG 0.064 . TA09880 30 TKPGVYK|ME 0.060 . TA09880 39 DLPNSLK|DS 0.055 . TA09880 47 SLVDSLK|SC 0.080 . TA09880 52 LKSCLTK|LK 0.081 . TA09880 54 SCLTKLK|SD 0.083 . TA09880 61 SDEPSCK|LV 0.079 . TA09880 72 EPFEQNK|DK 0.065 . TA09880 74 FEQNKDK|LS 0.070 . TA09880 91 GFGFNSR|GR 0.084 . TA09880 93 GFNSRGR|KH 0.081 . TA09880 94 FNSRGRK|HV 0.469 . TA09880 111 DCSFSFK|LF 0.071 . TA09880 132 EEDLISK|SV 0.091 . TA09880 137 SKSVLDK|TH 0.070 . TA09880 144 THDQLSK|LC 0.066 . TA09880 166 VSVSTEK|NT 0.059 . TA09880 185 FPESDQK|TV 0.061 . TA09880 189 DQKTVTR|NS 0.084 . TA09880 194 TRNSNPR|SG 0.211 . TA09880 198 NPRSGNK|SN 0.074 . TA09880 201 SGNKSNK|SK 0.095 . TA09880 203 NKSNKSK|NV 0.121 . TA09880 206 NKSKNVK|SA 0.127 . TA09880 210 NVKSAPK|TE 0.058 . TA09880 214 APKTENK|VK 0.059 . TA09880 216 KTENKVK|NK 0.067 . TA09880 218 ENKVKNK|DK 0.098 . TA09880 220 KVKNKDK|NK 0.064 . TA09880 222 KNKDKNK|IF 0.068 . TA09880 240 GSQFALK|LD 0.063 . TA09880 254 LSLALNK|EL 0.059 . TA09880 258 LNKELPK|VI 0.068 . TA09880 262 LPKVIDK|DE 0.069 . TA09880 268 KDEENDK|NT 0.060 . TA09880 277 CLNLVFK|FL 0.073 . TA09880 321 VFENSSK|LK 0.056 . TA09880 323 ENSSKLK|TV 0.087 . TA09880 334 PYDLVDK|TI 0.058 . TA09880 342 ILVSPHR|AI 0.104 . TA09880 354 PGWISPK|KS 0.071 . TA09880 355 GWISPKK|ST 0.147 . TA09880 385 GWGCCYR|SL 0.124 . TA09880 402 LGYHTTK|LV 0.070 . TA09880 409 LVPTHSK|IQ 0.060 . TA09880 415 KIQEVLK|EN 0.070 . TA09880 422 ENDVSHK|DL 0.081 . TA09880 425 VSHKDLK|VG 0.059 . TA09880 450 YLGYMYK|TL 0.062 . TA09880 461 NDVSEFR|NY 0.087 . TA09880 472 VIADHLK|SQ 0.080 . TA09880 517 TGEDSIK|NV 0.085 . TA09880 522 IKNVVNK|GG 0.078 . TA09880 528 KGGIGWK|KV 0.073 . TA09880 529 GGIGWKK|VG 0.085 . TA09880 535 KVGFLSK|AS 0.075 . TA09880 540 SKASEGK|FI 0.083 . TA09880 551 CLPLLEK|YG 0.054 . ____________________________^_________________

  • Fasta :-

    >TA09880 ATGTTGATTCATGCCTCCGTCTTATTCTTCTCTAAACTGTCTTTTAACGAAGATTCAGAA ACTAATGTCACTAAGCCAGGAGTATATAAAATGGAAGATTTACCTAATAGTTTAAAAGAT TCATTGGTAGATTCATTAAAGTCATGCTTGACTAAGCTTAAATCAGATGAACCATCTTGT AAACTTGTTTATTCAGAACCATTTGAACAGAATAAAGATAAACTTTCTGAGTTTTACCCA GTTTTCTCGTTAGGGTTTGGTTTCAATAGCAGAGGCAGAAAACATGTATTTATAGTTTGT GGAGAATATGAAGATTGCTCTTTCTCATTTAAGCTTTTTATTCAAAATACAGTTTTGATA AATTTGGAACAATCTGAAGAGGATTTAATTTCCAAATCAGTTTTAGATAAAACTCATGAT CAGTTGTCTAAGCTCTGTTCTTATATGACTAATGATATCAACAGTTTATCCTGTTATGTT TCTGTTTCAACTGAAAAAAATACTCAGGAATTGTTTTTGAATTATTTTAACGAATTTCCA GAATCAGACCAGAAAACAGTAACCAGAAACAGTAACCCTAGATCAGGTAACAAATCCAAT AAGAGTAAAAATGTTAAAAGTGCTCCTAAAACTGAAAATAAGGTTAAGAACAAAGATAAA AATAAAATATTTAACGTGGTTCCTCTTTTGGAGATGTTTGGATCACAATTTGCCCTTAAA TTAGATACAACAACTGGAGCATTATCATTGGCACTGAACAAGGAATTACCCAAAGTTATT GATAAAGATGAGGAAAATGATAAAAATACATGTTTAAATTTAGTTTTTAAGTTTTTAATG TCGAGTTCAAGCTACACTGAATCTGTAAATTATGTGCCTTTTGGAGGTACAGTTGTACCA TTCTTTGACTTTTCATCGCATTCAAATTTATCTCTTGATGGTGTTTTCGAAAATTCATCC AAACTAAAAACCGTTTTCAACCCTTATGATCTAGTTGATAAAACCATTTTAGTCTCACCT CACAGAGCTATTAATGCTTATCCGGGATGGATTTCCCCTAAAAAATCAACAGTTAGCATG GTTCAAGGGAATTATCAGTACTATCACTATACACAGATGGGTGTAAATGATACTGGTTGG GGGTGTTGTTACAGATCACTACAACTAGTTTGTAGTTGGTATTTACTTGGGTATCACACG ACTAAGCTGGTTCCAACACATTCCAAAATTCAAGAAGTTTTAAAAGAAAATGACGTTTCT CACAAGGATTTAAAAGTTGGAAGTAACACATGGATTGGAACAGTGGAATGCGGCTATTTT TTAAACTGGTACCTGGGATACATGTACAAAACTCTGTACCTAAATGATGTGTCAGAGTTC AGGAATTATAATGTAGTGATTGCAGATCACCTAAAGAGTCAAGGAACACCAGTGATTGTA GGAGCTGGGGCCTACGCCTACGTAATTTTAGGAATATGTGTAGAATCTGAACAAGGAGAA GTGGCGTATTTAATTGCAGACCCACATTACACAGGAGAGGACTCTATCAAAAATGTAGTA AATAAGGGTGGAATTGGCTGGAAAAAGGTTGGGTTTCTTTCCAAAGCCTCAGAAGGTAAA TTTATTAATCTCTGCCTTCCACTTCTTGAGAAATATGGTGTTTAA
  • Download Fasta

  • Fasta :-

    MLIHASVLFFSKLSFNEDSETNVTKPGVYKMEDLPNSLKDSLVDSLKSCLTKLKSDEPSC KLVYSEPFEQNKDKLSEFYPVFSLGFGFNSRGRKHVFIVCGEYEDCSFSFKLFIQNTVLI NLEQSEEDLISKSVLDKTHDQLSKLCSYMTNDINSLSCYVSVSTEKNTQELFLNYFNEFP ESDQKTVTRNSNPRSGNKSNKSKNVKSAPKTENKVKNKDKNKIFNVVPLLEMFGSQFALK LDTTTGALSLALNKELPKVIDKDEENDKNTCLNLVFKFLMSSSSYTESVNYVPFGGTVVP FFDFSSHSNLSLDGVFENSSKLKTVFNPYDLVDKTILVSPHRAINAYPGWISPKKSTVSM VQGNYQYYHYTQMGVNDTGWGCCYRSLQLVCSWYLLGYHTTKLVPTHSKIQEVLKENDVS HKDLKVGSNTWIGTVECGYFLNWYLGYMYKTLYLNDVSEFRNYNVVIADHLKSQGTPVIV GAGAYAYVILGICVESEQGEVAYLIADPHYTGEDSIKNVVNKGGIGWKKVGFLSKASEGK FINLCLPLLEKYGV

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA09880284 SMSSSSYTES0.992unspTA09880284 SMSSSSYTES0.992unspTA09880284 SMSSSSYTES0.992unspTA09880420 SENDVSHKDL0.998unspTA0988037 SDLPNSLKDS0.997unspTA09880125 SNLEQSEEDL0.997unsp

TA09880      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India