TA10095 | ubiquitin C-terminal hydrolase, putative

UniProt_ID: Q4U8S7

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0005515 GO:0036459
Computed_GO_Functions: protein binding thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA10095	OTHER	0.999918	0.000042	0.000040

No Results

Fasta :-
>TA10095 MDDQGNSVIVNVKWMGKQFDGLRMSLDEPLESFKKQLSSLTGVPPERQKIMFKGIIPNDA DLSKIKITNGARLMLIGSAEKPPECIEKVRFFDELSSQEKAKFMNENIIVKLPPGIMNLG NTCYFNSVVQFLFPVTELWNSVSKCLEGKPNTPDVNFAKSLLDMKKQLNHTLERFVPLVQ IQFLRKINPLFCRKDDKTGMYMQQDAEECLNCILGNLNSLSEEKISENVFGFSMVSNTKP VKSEGSEPSEPSESEKPPEESVTSVEHNLVLSCYMGTPLKSVGTLMDGINLSLNEELLKF SEKDGCDVLHNKVTKLSSLPKYLIVHLVRFEWKQKSQVSHTDAIKAKVCRRVNFERYIDI TSICSEVLYFPDILSQELQQKLRAARSHQIKKEDKLNEGLNGEVKDGNKSEEGESCDVEM VNLDGYEMSPGEYATGKYELISIVTHQGRTADAGHYICWTKDTREYPTKNSSNNNEKDLD NQENRENEPKKKKQVDMWIKFDDDVVSEHDWGSFDLCGGRSDYHIAVLLLYKSQNTTL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA10095.fa Sequence name : TA10095 Sequence length : 538 VALUES OF COMPUTED PARAMETERS Coef20 : 3.209 CoefTot : 0.000 ChDiff : -13 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.076 1.141 0.115 0.469 MesoH : -0.713 0.188 -0.481 0.171 MuHd_075 : 32.831 12.089 7.546 5.366 MuHd_095 : 29.541 18.297 9.089 4.916 MuHd_100 : 33.431 19.407 9.465 5.816 MuHd_105 : 27.094 15.959 7.492 5.170 Hmax_075 : 17.967 13.067 1.457 5.915 Hmax_095 : 9.900 10.500 1.055 4.350 Hmax_100 : 17.100 15.900 3.005 5.840 Hmax_105 : 6.900 12.800 0.566 4.460 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9170 0.0830 DFMC : 0.8736 0.1264

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 538 TA10095 MDDQGNSVIVNVKWMGKQFDGLRMSLDEPLESFKKQLSSLTGVPPERQKIMFKGIIPNDADLSKIKITNGARLMLIGSAE 80 KPPECIEKVRFFDELSSQEKAKFMNENIIVKLPPGIMNLGNTCYFNSVVQFLFPVTELWNSVSKCLEGKPNTPDVNFAKS 160 LLDMKKQLNHTLERFVPLVQIQFLRKINPLFCRKDDKTGMYMQQDAEECLNCILGNLNSLSEEKISENVFGFSMVSNTKP 240 VKSEGSEPSEPSESEKPPEESVTSVEHNLVLSCYMGTPLKSVGTLMDGINLSLNEELLKFSEKDGCDVLHNKVTKLSSLP 320 KYLIVHLVRFEWKQKSQVSHTDAIKAKVCRRVNFERYIDITSICSEVLYFPDILSQELQQKLRAARSHQIKKEDKLNEGL 400 NGEVKDGNKSEEGESCDVEMVNLDGYEMSPGEYATGKYELISIVTHQGRTADAGHYICWTKDTREYPTKNSSNNNEKDLD 480 NQENRENEPKKKKQVDMWIKFDDDVVSEHDWGSFDLCGGRSDYHIAVLLLYKSQNTTL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA10095 13 SVIVNVK|WM 0.080 . TA10095 17 NVKWMGK|QF 0.067 . TA10095 23 KQFDGLR|MS 0.073 . TA10095 34 EPLESFK|KQ 0.060 . TA10095 35 PLESFKK|QL 0.092 . TA10095 47 TGVPPER|QK 0.082 . TA10095 49 VPPERQK|IM 0.062 . TA10095 53 RQKIMFK|GI 0.079 . TA10095 64 NDADLSK|IK 0.064 . TA10095 66 ADLSKIK|IT 0.073 . TA10095 72 KITNGAR|LM 0.068 . TA10095 81 LIGSAEK|PP 0.060 . TA10095 88 PPECIEK|VR 0.062 . TA10095 90 ECIEKVR|FF 0.108 . TA10095 100 ELSSQEK|AK 0.074 . TA10095 102 SSQEKAK|FM 0.094 . TA10095 111 NENIIVK|LP 0.059 . TA10095 144 LWNSVSK|CL 0.083 . TA10095 149 SKCLEGK|PN 0.068 . TA10095 159 PDVNFAK|SL 0.102 . TA10095 165 KSLLDMK|KQ 0.053 . TA10095 166 SLLDMKK|QL 0.110 . TA10095 174 LNHTLER|FV 0.151 . TA10095 185 VQIQFLR|KI 0.089 . TA10095 186 QIQFLRK|IN 0.062 . TA10095 193 INPLFCR|KD 0.100 . TA10095 194 NPLFCRK|DD 0.095 . TA10095 197 FCRKDDK|TG 0.062 . TA10095 224 NSLSEEK|IS 0.062 . TA10095 239 SMVSNTK|PV 0.073 . TA10095 242 SNTKPVK|SE 0.083 . TA10095 256 EPSESEK|PP 0.086 . TA10095 280 YMGTPLK|SV 0.122 . TA10095 299 LNEELLK|FS 0.069 . TA10095 303 LLKFSEK|DG 0.090 . TA10095 312 CDVLHNK|VT 0.053 . TA10095 315 LHNKVTK|LS 0.065 . TA10095 321 KLSSLPK|YL 0.086 . TA10095 329 LIVHLVR|FE 0.101 . TA10095 333 LVRFEWK|QK 0.083 . TA10095 335 RFEWKQK|SQ 0.074 . TA10095 345 SHTDAIK|AK 0.056 . TA10095 347 TDAIKAK|VC 0.081 . TA10095 350 IKAKVCR|RV 0.146 . TA10095 351 KAKVCRR|VN 0.112 . TA10095 356 RRVNFER|YI 0.127 . TA10095 381 SQELQQK|LR 0.061 . TA10095 383 ELQQKLR|AA 0.106 . TA10095 386 QKLRAAR|SH 0.353 . TA10095 391 ARSHQIK|KE 0.085 . TA10095 392 RSHQIKK|ED 0.104 . TA10095 395 QIKKEDK|LN 0.064 . TA10095 405 GLNGEVK|DG 0.086 . TA10095 409 EVKDGNK|SE 0.067 . TA10095 437 GEYATGK|YE 0.074 . TA10095 449 IVTHQGR|TA 0.132 . TA10095 461 HYICWTK|DT 0.070 . TA10095 464 CWTKDTR|EY 0.073 . TA10095 469 TREYPTK|NS 0.073 . TA10095 477 SSNNNEK|DL 0.113 . TA10095 485 LDNQENR|EN 0.105 . TA10095 490 NRENEPK|KK 0.076 . TA10095 491 RENEPKK|KK 0.110 . TA10095 492 ENEPKKK|KQ 0.093 . TA10095 493 NEPKKKK|QV 0.172 . TA10095 500 QVDMWIK|FD 0.072 . TA10095 520 FDLCGGR|SD 0.086 . TA10095 532 AVLLLYK|SQ 0.068 . ____________________________^_________________

Fasta :-
>TA10095 ATGGACGACCAAGGCAATTCTGTGATTGTTAACGTAAAGTGGATGGGCAAACAATTCGAC GGCTTAAGGATGAGCTTAGATGAGCCTTTAGAATCCTTTAAAAAGCAACTTAGTTCTCTA ACTGGTGTGCCTCCTGAAAGGCAAAAAATAATGTTCAAGGGTATAATTCCAAACGACGCC GATCTATCAAAGATTAAGATCACTAATGGAGCTAGGCTTATGCTAATAGGAAGTGCTGAG AAGCCTCCTGAGTGTATTGAAAAAGTCCGTTTCTTTGACGAATTGTCGTCACAGGAAAAG GCCAAATTTATGAATGAGAACATTATTGTTAAACTTCCACCGGGTATAATGAATCTGGGA AATACATGTTATTTCAATTCGGTAGTTCAATTCCTATTCCCAGTTACTGAATTATGGAAT TCTGTTTCAAAGTGCTTAGAAGGGAAACCAAACACACCAGATGTGAATTTTGCAAAGTCA CTTCTTGATATGAAGAAACAGCTGAACCACACCTTGGAGCGTTTTGTCCCCTTGGTCCAG ATACAATTCTTGAGGAAAATCAACCCTTTATTTTGTAGAAAGGACGACAAAACAGGAATG TATATGCAACAGGACGCAGAGGAATGCTTAAATTGTATACTGGGAAATTTAAACTCTTTA TCTGAAGAGAAGATTTCAGAGAATGTGTTTGGGTTTTCTATGGTTTCAAACACAAAGCCT GTTAAGTCTGAGGGTTCAGAACCATCCGAACCATCTGAATCAGAAAAACCCCCTGAGGAA AGCGTAACCTCAGTGGAACATAATTTGGTACTATCATGCTATATGGGAACTCCACTGAAG TCTGTGGGCACCTTGATGGATGGGATTAACTTGTCTCTTAATGAGGAACTGTTAAAATTT TCAGAGAAGGACGGCTGCGACGTTTTGCATAACAAGGTCACCAAACTCAGTTCTCTCCCC AAGTACTTGATAGTACATCTTGTCCGTTTTGAGTGGAAGCAGAAGAGTCAGGTATCGCAT ACGGACGCAATCAAGGCTAAGGTGTGTCGAAGGGTTAACTTTGAGAGGTACATCGACATC ACCAGCATTTGTTCTGAGGTACTTTATTTCCCAGACATTTTATCTCAGGAACTCCAACAA AAACTAAGAGCTGCCAGATCTCATCAAATTAAAAAGGAAGATAAACTAAACGAGGGGTTA AATGGAGAAGTAAAGGACGGGAATAAGAGTGAGGAGGGTGAGAGTTGCGATGTGGAGATG GTAAATTTGGATGGCTATGAGATGTCACCCGGGGAATATGCTACTGGGAAATATGAGCTT ATTTCTATAGTAACGCATCAAGGAAGAACAGCAGATGCAGGTCATTACATATGTTGGACC AAGGATACCAGGGAATACCCGACCAAAAATAGCTCAAACAACAATGAAAAGGATTTAGAT AACCAAGAGAATCGTGAAAACGAGCCTAAAAAGAAAAAACAAGTAGATATGTGGATAAAA TTTGATGACGATGTGGTCTCAGAACACGATTGGGGATCTTTCGATTTGTGCGGAGGCAGG AGTGACTATCACATAGCTGTATTACTATTATACAAATCACAAAATACAACACTATAA
Download Fasta

Fasta :-

MDDQGNSVIVNVKWMGKQFDGLRMSLDEPLESFKKQLSSLTGVPPERQKIMFKGIIPNDA DLSKIKITNGARLMLIGSAEKPPECIEKVRFFDELSSQEKAKFMNENIIVKLPPGIMNLG NTCYFNSVVQFLFPVTELWNSVSKCLEGKPNTPDVNFAKSLLDMKKQLNHTLERFVPLVQ IQFLRKINPLFCRKDDKTGMYMQQDAEECLNCILGNLNSLSEEKISENVFGFSMVSNTKP VKSEGSEPSEPSESEKPPEESVTSVEHNLVLSCYMGTPLKSVGTLMDGINLSLNEELLKF SEKDGCDVLHNKVTKLSSLPKYLIVHLVRFEWKQKSQVSHTDAIKAKVCRRVNFERYIDI TSICSEVLYFPDILSQELQQKLRAARSHQIKKEDKLNEGLNGEVKDGNKSEEGESCDVEM VNLDGYEMSPGEYATGKYELISIVTHQGRTADAGHYICWTKDTREYPTKNSSNNNEKDLD NQENRENEPKKKKQVDMWIKFDDDVVSEHDWGSFDLCGGRSDYHIAVLLLYKSQNTTL

Ubiquitin-related

title: Active Site
coordinates: N118,C123,H455,D503

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA10095	S	249	0.615	0.377	TA10095	S	252	0.586	0.097	TA10095	S	246	0.552	0.072	TA10095	S	254	0.548	0.474	TA10095	T	263	0.541	0.359

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA10095	S	249	0.615	0.377	TA10095	S	252	0.586	0.097	TA10095	S	246	0.552	0.072	TA10095	S	254	0.548	0.474	TA10095	T	263	0.541	0.359

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TA10095	254 S	EPSESEKPP	0.996	unsp	TA10095	254 S	EPSESEKPP	0.996	unsp	TA10095	254 S	EPSESEKPP	0.996	unsp	TA10095	301 S	LLKFSEKDG	0.997	unsp	TA10095	339 S	KSQVSHTDA	0.995	unsp	TA10095	410 S	DGNKSEEGE	0.993	unsp	TA10095	25 S	GLRMSLDEP	0.991	unsp	TA10095	243 S	KPVKSEGSE	0.992	unsp

TA10095 | ubiquitin C-terminal hydrolase, putative

ID's

UniProt_ID: Q4U8S7

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0005515 GO:0036459

Computed_GO_Functions: protein binding thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin-related

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA10095

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India