TA11805 | erythrocyte membrane-associated malaria antigen-like

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_IDPredictionOTHERSPmTPCS_Position
TA11805SP0.2117420.7875500.000708CS pos: 25-26. IRA-ED. Pr: 0.8947
No Results

  • Fasta :-

    >TA11805 MVINFSRTLTLYFWLFYRIILIIRAEDILASESNIVDYKVDSLPLEFVPGSGYVVKVEVG GQPLKLLLDPNVCGIILFENTDRICSKDDKGSCYDPYKSKTASWCVNTAVCVPGKFNYQC KETPSPSKIKELTVDSDIIKIYSIEGLESLKIAVDHKKSPYILDKVPVKLGRSLDRYDRK IFTNVDGIFGISVTRDYRGFFVLDINPVQNVRFPSKLFLGTDRVSEDEIVWSEKRQTGGI FTNSLIQFTIYDLKMCNTKIFGRTSSNWEAAIDLTTPYLILPKNFWMTMMSYLPVDKSCF DEGLSPRLCKLTVGNRLFPIIEFKLSESYYLNFEKVETPSITIPLENLIYDDGDSKTLLI IPDEFSDRPSYTLNPTIKFGYKVLESLNVVVDSDGYRVGLISKNQLVGSFSKCSEVPQCF GDQVYEPALNICLNPICSIWLMKRLNPEKGICETSFVAKVVITTVICALVVAELYCNFAR KHILRITSRLCR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA11805.fa Sequence name : TA11805 Sequence length : 492 VALUES OF COMPUTED PARAMETERS Coef20 : 5.011 CoefTot : 0.698 ChDiff : 1 ZoneTo : 25 KR : 3 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.688 2.553 0.467 0.721 MesoH : -0.222 0.735 -0.175 0.327 MuHd_075 : 27.810 20.725 6.828 6.908 MuHd_095 : 31.728 17.266 7.085 8.124 MuHd_100 : 35.648 20.293 8.890 8.579 MuHd_105 : 35.892 25.002 9.584 9.048 Hmax_075 : 18.600 17.900 3.413 6.960 Hmax_095 : 17.238 16.100 2.619 6.755 Hmax_100 : 19.400 19.900 3.460 7.760 Hmax_105 : 22.750 17.413 5.122 8.983 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3217 0.6783 DFMC : 0.6302 0.3698
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 492 TA11805 MVINFSRTLTLYFWLFYRIILIIRAEDILASESNIVDYKVDSLPLEFVPGSGYVVKVEVGGQPLKLLLDPNVCGIILFEN 80 TDRICSKDDKGSCYDPYKSKTASWCVNTAVCVPGKFNYQCKETPSPSKIKELTVDSDIIKIYSIEGLESLKIAVDHKKSP 160 YILDKVPVKLGRSLDRYDRKIFTNVDGIFGISVTRDYRGFFVLDINPVQNVRFPSKLFLGTDRVSEDEIVWSEKRQTGGI 240 FTNSLIQFTIYDLKMCNTKIFGRTSSNWEAAIDLTTPYLILPKNFWMTMMSYLPVDKSCFDEGLSPRLCKLTVGNRLFPI 320 IEFKLSESYYLNFEKVETPSITIPLENLIYDDGDSKTLLIIPDEFSDRPSYTLNPTIKFGYKVLESLNVVVDSDGYRVGL 400 ISKNQLVGSFSKCSEVPQCFGDQVYEPALNICLNPICSIWLMKRLNPEKGICETSFVAKVVITTVICALVVAELYCNFAR 480 KHILRITSRLCR 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............ 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA11805 7 MVINFSR|TL 0.083 . TA11805 18 YFWLFYR|II 0.080 . TA11805 24 RIILIIR|AE 0.073 . TA11805 39 SNIVDYK|VD 0.061 . TA11805 56 GSGYVVK|VE 0.070 . TA11805 65 VGGQPLK|LL 0.055 . TA11805 83 LFENTDR|IC 0.091 . TA11805 87 TDRICSK|DD 0.076 . TA11805 90 ICSKDDK|GS 0.067 . TA11805 98 SCYDPYK|SK 0.082 . TA11805 100 YDPYKSK|TA 0.084 . TA11805 115 AVCVPGK|FN 0.075 . TA11805 121 KFNYQCK|ET 0.064 . TA11805 128 ETPSPSK|IK 0.058 . TA11805 130 PSPSKIK|EL 0.063 . TA11805 140 VDSDIIK|IY 0.073 . TA11805 151 EGLESLK|IA 0.059 . TA11805 157 KIAVDHK|KS 0.065 . TA11805 158 IAVDHKK|SP 0.127 . TA11805 165 SPYILDK|VP 0.064 . TA11805 169 LDKVPVK|LG 0.057 . TA11805 172 VPVKLGR|SL 0.162 . TA11805 176 LGRSLDR|YD 0.125 . TA11805 179 SLDRYDR|KI 0.233 . TA11805 180 LDRYDRK|IF 0.096 . TA11805 195 FGISVTR|DY 0.088 . TA11805 198 SVTRDYR|GF 0.164 . TA11805 212 NPVQNVR|FP 0.092 . TA11805 216 NVRFPSK|LF 0.063 . TA11805 223 LFLGTDR|VS 0.090 . TA11805 234 EIVWSEK|RQ 0.065 . TA11805 235 IVWSEKR|QT 0.250 . TA11805 254 FTIYDLK|MC 0.062 . TA11805 259 LKMCNTK|IF 0.066 . TA11805 263 NTKIFGR|TS 0.100 . TA11805 283 PYLILPK|NF 0.057 . TA11805 297 SYLPVDK|SC 0.080 . TA11805 307 DEGLSPR|LC 0.070 . TA11805 310 LSPRLCK|LT 0.121 . TA11805 316 KLTVGNR|LF 0.072 . TA11805 324 FPIIEFK|LS 0.064 . TA11805 335 YYLNFEK|VE 0.058 . TA11805 356 YDDGDSK|TL 0.057 . TA11805 368 PDEFSDR|PS 0.090 . TA11805 378 TLNPTIK|FG 0.096 . TA11805 382 TIKFGYK|VL 0.063 . TA11805 397 VDSDGYR|VG 0.077 . TA11805 403 RVGLISK|NQ 0.054 . TA11805 412 LVGSFSK|CS 0.061 . TA11805 443 CSIWLMK|RL 0.065 . TA11805 444 SIWLMKR|LN 0.136 . TA11805 449 KRLNPEK|GI 0.067 . TA11805 459 ETSFVAK|VV 0.096 . TA11805 480 LYCNFAR|KH 0.080 . TA11805 481 YCNFARK|HI 0.097 . TA11805 485 ARKHILR|IT 0.112 . TA11805 489 ILRITSR|LC 0.086 . TA11805 492 ITSRLCR|-- 0.318 . ____________________________^_________________

  • Fasta :-

    >TA11805 ATGGTAATAAATTTTAGTCGAACATTGACTTTATATTTCTGGCTTTTTTATCGGATAATT TTAATAATTAGAGCTGAGGATATATTGGCCTCGGAATCAAACATTGTGGACTATAAAGTC GATTCTTTACCACTGGAATTTGTTCCCGGCAGCGGTTACGTAGTTAAAGTTGAAGTTGGC GGCCAGCCTCTGAAGCTTTTGTTAGATCCAAATGTTTGCGGTATAATTTTGTTCGAAAAC ACAGACAGAATTTGTTCTAAAGATGATAAGGGAAGCTGTTATGACCCATACAAGTCAAAA ACAGCAAGCTGGTGTGTTAACACGGCAGTTTGCGTACCAGGAAAGTTCAATTACCAGTGC AAGGAAACACCTTCACCCAGCAAAATAAAGGAACTTACGGTCGATTCTGATATTATAAAA ATATATTCAATTGAGGGTTTAGAGTCCCTTAAAATCGCAGTTGACCACAAAAAATCACCT TACATCCTTGATAAAGTACCAGTCAAACTCGGACGCTCTTTGGACCGCTACGATCGCAAG ATTTTTACCAATGTTGATGGCATTTTTGGCATATCAGTAACGCGTGATTATCGCGGCTTT TTTGTACTGGATATTAACCCTGTACAGAATGTTAGATTCCCCAGTAAGTTATTTTTGGGT ACCGACAGAGTTTCTGAGGATGAAATAGTCTGGTCTGAAAAGCGTCAAACCGGTGGAATC TTCACTAATTCACTCATACAATTCACTATCTATGATCTAAAAATGTGTAACACAAAAATC TTCGGACGCACTTCGTCAAATTGGGAAGCAGCCATAGATCTCACAACACCGTATTTGATA TTGCCGAAGAATTTTTGGATGACAATGATGTCATATTTACCAGTGGATAAATCATGCTTC GATGAGGGTCTAAGCCCTCGATTATGTAAACTAACTGTTGGGAACAGACTGTTCCCAATC ATTGAGTTTAAACTTAGCGAGTCTTATTATTTGAATTTCGAAAAGGTCGAAACTCCTTCA ATCACAATTCCCCTTGAAAATCTCATATACGATGATGGAGATAGTAAAACGTTACTCATC ATCCCAGATGAATTCAGTGATAGGCCTTCTTATACCTTAAATCCTACCATCAAATTTGGT TACAAAGTGTTGGAATCGCTGAATGTTGTGGTCGATAGTGATGGGTACAGAGTGGGACTC ATTAGCAAGAACCAGTTGGTAGGTTCATTTTCCAAGTGTTCAGAGGTCCCACAATGCTTT GGAGACCAGGTTTATGAACCTGCACTCAATATTTGCCTCAACCCAATCTGTAGCATATGG CTCATGAAACGCCTAAACCCAGAAAAAGGGATCTGCGAGACATCGTTTGTGGCTAAGGTT GTGATAACAACAGTTATTTGTGCTCTGGTGGTAGCAGAACTATATTGTAATTTCGCTCGA AAACATATTTTAAGAATCACATCAAGATTGTGTAGATAA
  • Download Fasta

  • Fasta :-

    MVINFSRTLTLYFWLFYRIILIIRAEDILASESNIVDYKVDSLPLEFVPGSGYVVKVEVG GQPLKLLLDPNVCGIILFENTDRICSKDDKGSCYDPYKSKTASWCVNTAVCVPGKFNYQC KETPSPSKIKELTVDSDIIKIYSIEGLESLKIAVDHKKSPYILDKVPVKLGRSLDRYDRK IFTNVDGIFGISVTRDYRGFFVLDINPVQNVRFPSKLFLGTDRVSEDEIVWSEKRQTGGI FTNSLIQFTIYDLKMCNTKIFGRTSSNWEAAIDLTTPYLILPKNFWMTMMSYLPVDKSCF DEGLSPRLCKLTVGNRLFPIIEFKLSESYYLNFEKVETPSITIPLENLIYDDGDSKTLLI IPDEFSDRPSYTLNPTIKFGYKVLESLNVVVDSDGYRVGLISKNQLVGSFSKCSEVPQCF GDQVYEPALNICLNPICSIWLMKRLNPEKGICETSFVAKVVITTVICALVVAELYCNFAR KHILRITSRLCR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA1180592 SDDKGSCYDP0.992unspTA11805225 STDRVSEDEI0.997unsp

TA11805      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India