TA12400 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA12400OTHER0.9999240.0000680.000007
No Results

  • Fasta :-

    >TA12400 MSNIMELDKARKDIEIEMEALMSYLNSEECKYVGLTGPLVDNEQFPRNDIDIYEVRKARG RIMCLKNDYQRKLNNRNVGDCLITTLIANFKFEFNRISLESAIIHQKCNTKLTTQDLNQK WVKKEVKIVKCVIPIVRRGIYNYTSTPIILMIYPILF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA12400.fa Sequence name : TA12400 Sequence length : 157 VALUES OF COMPUTED PARAMETERS Coef20 : 3.575 CoefTot : -0.022 ChDiff : 5 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.224 1.129 0.112 0.576 MesoH : -1.098 0.180 -0.512 0.107 MuHd_075 : 23.569 13.284 6.258 4.148 MuHd_095 : 5.805 4.823 2.602 0.859 MuHd_100 : 10.561 10.207 4.033 2.396 MuHd_105 : 15.971 14.551 5.618 4.038 Hmax_075 : 6.767 12.483 -0.601 3.733 Hmax_095 : -8.487 3.200 -4.370 1.155 Hmax_100 : -3.100 8.500 -1.769 1.880 Hmax_105 : -2.800 8.867 -1.864 3.500 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9640 0.0360 DFMC : 0.9226 0.0774
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 157 TA12400 MSNIMELDKARKDIEIEMEALMSYLNSEECKYVGLTGPLVDNEQFPRNDIDIYEVRKARGRIMCLKNDYQRKLNNRNVGD 80 CLITTLIANFKFEFNRISLESAIIHQKCNTKLTTQDLNQKWVKKEVKIVKCVIPIVRRGIYNYTSTPIILMIYPILF 160 ................................................................................ 80 ............................................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA12400 9 NIMELDK|AR 0.067 . TA12400 11 MELDKAR|KD 0.104 . TA12400 12 ELDKARK|DI 0.116 . TA12400 31 LNSEECK|YV 0.121 . TA12400 47 DNEQFPR|ND 0.085 . TA12400 56 IDIYEVR|KA 0.101 . TA12400 57 DIYEVRK|AR 0.085 . TA12400 59 YEVRKAR|GR 0.263 . TA12400 61 VRKARGR|IM 0.086 . TA12400 66 GRIMCLK|ND 0.064 . TA12400 71 LKNDYQR|KL 0.082 . TA12400 72 KNDYQRK|LN 0.083 . TA12400 76 QRKLNNR|NV 0.222 . TA12400 91 TLIANFK|FE 0.065 . TA12400 96 FKFEFNR|IS 0.078 . TA12400 107 SAIIHQK|CN 0.067 . TA12400 111 HQKCNTK|LT 0.071 . TA12400 120 TQDLNQK|WV 0.075 . TA12400 123 LNQKWVK|KE 0.066 . TA12400 124 NQKWVKK|EV 0.152 . TA12400 127 WVKKEVK|IV 0.085 . TA12400 130 KEVKIVK|CV 0.085 . TA12400 137 CVIPIVR|RG 0.066 . TA12400 138 VIPIVRR|GI 0.141 . ____________________________^_________________

  • Fasta :-

    >TA12400 ATGTCGAATATTATGGAATTGGATAAAGCTAGGAAGGATATTGAAATTGAAATGGAAGCG TTAATGAGTTACTTAAACAGTGAAGAGTGTAAATATGTCGGTTTAACTGGACCACTCGTG GATAATGAACAGTTTCCTAGAAACGATATAGACATTTATGAGGTCAGAAAAGCCAGAGGG AGAATTATGTGTTTAAAAAACGATTACCAAAGGAAGTTAAATAATAGAAATGTAGGTGAT TGTTTGATTACTACCTTAATCGCTAATTTTAAATTTGAATTTAATCGAATTAGTTTAGAA TCTGCGATAATTCATCAAAAGTGTAATACGAAGTTGACAACCCAAGATCTGAATCAAAAA TGGGTTAAAAAGGAAGTAAAAATTGTAAAATGTGTTATACCTATTGTAAGAAGAGGTATC TACAATTATACCAGTACCCCCATAATATTAATGATATACCCAATTTTATTTTAA
  • Download Fasta

  • Fasta :-

    MSNIMELDKARKDIEIEMEALMSYLNSEECKYVGLTGPLVDNEQFPRNDIDIYEVRKARG RIMCLKNDYQRKLNNRNVGDCLITTLIANFKFEFNRISLESAIIHQKCNTKLTTQDLNQK WVKKEVKIVKCVIPIVRRGIYNYTSTPIILMIYPILF

    No Results
    No Results
No Results
No Results
No Results

TA12400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India