TA12615 | autophagy protein 8I, putative

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_IDPredictionOTHERSPmTPCS_Position
TA12615OTHER0.9880460.0058620.006091
No Results

  • Fasta :-

    >TA12615 MVVNLDEELDDILAERKNEVSRLRSKFRNRIPVICIPSHNNPFKIERSKFLVPVNMMYGE FKYLLQKHLNCQLMDDPHYYGKNSTVYLYVNNKIPKMSTLLGDLFRKHKSEDGILYMVYS SENTLG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA12615.fa Sequence name : TA12615 Sequence length : 126 VALUES OF COMPUTED PARAMETERS Coef20 : 3.316 CoefTot : -0.012 ChDiff : 3 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.076 0.600 -0.345 0.378 MesoH : -1.211 -0.256 -0.639 0.070 MuHd_075 : 27.640 10.704 5.587 4.340 MuHd_095 : 25.037 19.674 6.805 3.993 MuHd_100 : 23.887 21.742 7.972 4.146 MuHd_105 : 22.074 21.054 8.211 4.527 Hmax_075 : 0.467 7.233 -2.147 2.753 Hmax_095 : -3.150 11.900 -1.792 2.135 Hmax_100 : 5.200 17.500 0.948 3.940 Hmax_105 : -1.700 12.100 -1.491 3.860 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8948 0.1052 DFMC : 0.8925 0.1075
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 126 TA12615 MVVNLDEELDDILAERKNEVSRLRSKFRNRIPVICIPSHNNPFKIERSKFLVPVNMMYGEFKYLLQKHLNCQLMDDPHYY 80 GKNSTVYLYVNNKIPKMSTLLGDLFRKHKSEDGILYMVYSSENTLG 160 ................................................................................ 80 .............................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA12615 16 DDILAER|KN 0.081 . TA12615 17 DILAERK|NE 0.061 . TA12615 22 RKNEVSR|LR 0.105 . TA12615 24 NEVSRLR|SK 0.104 . TA12615 26 VSRLRSK|FR 0.065 . TA12615 28 RLRSKFR|NR 0.125 . TA12615 30 RSKFRNR|IP 0.097 . TA12615 44 SHNNPFK|IE 0.074 . TA12615 47 NPFKIER|SK 0.131 . TA12615 49 FKIERSK|FL 0.079 . TA12615 62 MMYGEFK|YL 0.072 . TA12615 67 FKYLLQK|HL 0.065 . TA12615 82 DPHYYGK|NS 0.068 . TA12615 93 YLYVNNK|IP 0.054 . TA12615 96 VNNKIPK|MS 0.071 . TA12615 106 LLGDLFR|KH 0.077 . TA12615 107 LGDLFRK|HK 0.079 . TA12615 109 DLFRKHK|SE 0.267 . ____________________________^_________________

  • Fasta :-

    >TA12615 ATGGTAGTGAATTTAGATGAGGAGTTGGATGATATACTAGCAGAGAGGAAAAATGAGGTT TCAAGGTTAAGATCTAAATTTAGAAACAGGATTCCCGTAATTTGTATACCTTCTCATAAC AATCCATTTAAAATCGAAAGATCAAAGTTCCTCGTACCAGTGAATATGATGTACGGCGAA TTTAAATACTTACTACAAAAACACTTAAATTGCCAATTAATGGACGATCCTCATTATTAT GGAAAAAACAGCACTGTATACTTATATGTAAACAATAAAATACCCAAAATGTCCACTCTT CTGGGTGATTTATTCAGAAAACACAAATCCGAAGACGGAATTTTGTATATGGTTTATTCA AGTGAAAACACACTGGGATAA
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  • Fasta :-

    MVVNLDEELDDILAERKNEVSRLRSKFRNRIPVICIPSHNNPFKIERSKFLVPVNMMYGE FKYLLQKHLNCQLMDDPHYYGKNSTVYLYVNNKIPKMSTLLGDLFRKHKSEDGILYMVYS SENTLG

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TA12615      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India