TA12645 | ubiquitin carboxy-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
TA12645OTHER0.9998570.0000260.000117
No Results

  • Fasta :-

    >TA12645 MSNARTYLPYVIELHNKSIKFTKYSPSNSDLLNHSKLNTNEDDSQNKFKTFPVLKNLKNS QIRGIYHLPKVKWDDESMTMGAGLNNPGINICYMNVIIQVLTHTPFLASSLLKSYHSKTC LHYEKDIFCIMCLFENYVKKSFASPNPLNNPFYSIAKKFIWSRFKLGHQDDAFIFLKHFL DSLSKACYLNSKESEKQEDGSETTSGPKDFISNDQIMSTVIGRLFGGYFRNVIVCNNCSR KSEKVEEFFDLAVEVTKSNRLIDLLSEFVLPEKLTNDNKYFCSNCKSYQNANKSLSIYKA PRILNINLKRFNLYSSVYKKSLKAIEFPQLLSISLKTSEDSYTWLNYDLYAIVCHIGKSL HMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVYLLFYSINNESVGDCDTALNL FSYSNILKESKSSQSEPIATPEREPRRCEIDILSYFGGNTIFKRFLKHRKFKNYNLLNMK ILSNIQRMNNLKRKINSIVTNNQENKETIQKINKKEKESKLKDTDTDLKSEVKCSLKHTS FIDAIGDEDVSAEIELWSDAEDVETYNKLYEQIDPDLPKPTEEDLEYDRGKIHKSKNRNR PNPANVELVNHRSGINVAVEQKNLFDNTVISP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA12645.fa Sequence name : TA12645 Sequence length : 632 VALUES OF COMPUTED PARAMETERS Coef20 : 3.810 CoefTot : -1.110 ChDiff : 9 ZoneTo : 29 KR : 4 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.524 0.101 0.566 MesoH : -0.181 0.297 -0.318 0.232 MuHd_075 : 11.153 8.164 4.053 2.746 MuHd_095 : 37.633 21.074 10.150 7.659 MuHd_100 : 35.742 24.178 10.059 7.389 MuHd_105 : 40.699 24.285 11.239 7.304 Hmax_075 : 1.050 4.083 -1.749 2.357 Hmax_095 : 9.362 9.450 0.978 4.112 Hmax_100 : 10.800 14.800 1.064 5.040 Hmax_105 : 12.400 14.583 0.895 5.343 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8580 0.1420 DFMC : 0.8709 0.1291
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 632 TA12645 MSNARTYLPYVIELHNKSIKFTKYSPSNSDLLNHSKLNTNEDDSQNKFKTFPVLKNLKNSQIRGIYHLPKVKWDDESMTM 80 GAGLNNPGINICYMNVIIQVLTHTPFLASSLLKSYHSKTCLHYEKDIFCIMCLFENYVKKSFASPNPLNNPFYSIAKKFI 160 WSRFKLGHQDDAFIFLKHFLDSLSKACYLNSKESEKQEDGSETTSGPKDFISNDQIMSTVIGRLFGGYFRNVIVCNNCSR 240 KSEKVEEFFDLAVEVTKSNRLIDLLSEFVLPEKLTNDNKYFCSNCKSYQNANKSLSIYKAPRILNINLKRFNLYSSVYKK 320 SLKAIEFPQLLSISLKTSEDSYTWLNYDLYAIVCHIGKSLHMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVY 400 LLFYSINNESVGDCDTALNLFSYSNILKESKSSQSEPIATPEREPRRCEIDILSYFGGNTIFKRFLKHRKFKNYNLLNMK 480 ILSNIQRMNNLKRKINSIVTNNQENKETIQKINKKEKESKLKDTDTDLKSEVKCSLKHTSFIDAIGDEDVSAEIELWSDA 560 EDVETYNKLYEQIDPDLPKPTEEDLEYDRGKIHKSKNRNRPNPANVELVNHRSGINVAVEQKNLFDNTVISP 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ........................................................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA12645 5 --MSNAR|TY 0.079 . TA12645 17 VIELHNK|SI 0.073 . TA12645 20 LHNKSIK|FT 0.079 . TA12645 23 KSIKFTK|YS 0.070 . TA12645 36 DLLNHSK|LN 0.062 . TA12645 47 EDDSQNK|FK 0.056 . TA12645 49 DSQNKFK|TF 0.068 . TA12645 55 KTFPVLK|NL 0.060 . TA12645 58 PVLKNLK|NS 0.053 . TA12645 63 LKNSQIR|GI 0.119 . TA12645 70 GIYHLPK|VK 0.075 . TA12645 72 YHLPKVK|WD 0.067 . TA12645 113 LASSLLK|SY 0.091 . TA12645 118 LKSYHSK|TC 0.089 . TA12645 125 TCLHYEK|DI 0.083 . TA12645 139 LFENYVK|KS 0.057 . TA12645 140 FENYVKK|SF 0.137 . TA12645 157 PFYSIAK|KF 0.060 . TA12645 158 FYSIAKK|FI 0.134 . TA12645 163 KKFIWSR|FK 0.101 . TA12645 165 FIWSRFK|LG 0.059 . TA12645 177 DAFIFLK|HF 0.064 . TA12645 185 FLDSLSK|AC 0.052 . TA12645 192 ACYLNSK|ES 0.073 . TA12645 196 NSKESEK|QE 0.078 . TA12645 208 ETTSGPK|DF 0.059 . TA12645 223 MSTVIGR|LF 0.112 . TA12645 230 LFGGYFR|NV 0.096 . TA12645 240 VCNNCSR|KS 0.113 . TA12645 241 CNNCSRK|SE 0.146 . TA12645 244 CSRKSEK|VE 0.064 . TA12645 257 LAVEVTK|SN 0.073 . TA12645 260 EVTKSNR|LI 0.072 . TA12645 273 EFVLPEK|LT 0.056 . TA12645 279 KLTNDNK|YF 0.060 . TA12645 286 YFCSNCK|SY 0.076 . TA12645 293 SYQNANK|SL 0.091 . TA12645 299 KSLSIYK|AP 0.058 . TA12645 302 SIYKAPR|IL 0.104 . TA12645 309 ILNINLK|RF 0.058 . TA12645 310 LNINLKR|FN 0.137 . TA12645 319 LYSSVYK|KS 0.071 . TA12645 320 YSSVYKK|SL 0.329 . TA12645 323 VYKKSLK|AI 0.063 . TA12645 336 LLSISLK|TS 0.088 . TA12645 358 IVCHIGK|SL 0.088 . TA12645 370 HYITFIK|GK 0.061 . TA12645 372 ITFIKGK|HG 0.075 . TA12645 378 KHGFWYR|FD 0.124 . TA12645 428 SYSNILK|ES 0.064 . TA12645 431 NILKESK|SS 0.070 . TA12645 443 PIATPER|EP 0.080 . TA12645 446 TPEREPR|RC 0.278 . TA12645 447 PEREPRR|CE 0.160 . TA12645 463 GGNTIFK|RF 0.061 . TA12645 464 GNTIFKR|FL 0.181 . TA12645 467 IFKRFLK|HR 0.096 . TA12645 469 KRFLKHR|KF 0.097 . TA12645 470 RFLKHRK|FK 0.092 . TA12645 472 LKHRKFK|NY 0.151 . TA12645 480 YNLLNMK|IL 0.069 . TA12645 487 ILSNIQR|MN 0.106 . TA12645 492 QRMNNLK|RK 0.067 . TA12645 493 RMNNLKR|KI 0.229 . TA12645 494 MNNLKRK|IN 0.134 . TA12645 506 TNNQENK|ET 0.084 . TA12645 511 NKETIQK|IN 0.060 . TA12645 514 TIQKINK|KE 0.056 . TA12645 515 IQKINKK|EK 0.119 . TA12645 517 KINKKEK|ES 0.071 . TA12645 520 KKEKESK|LK 0.068 . TA12645 522 EKESKLK|DT 0.101 . TA12645 529 DTDTDLK|SE 0.057 . TA12645 533 DLKSEVK|CS 0.056 . TA12645 537 EVKCSLK|HT 0.065 . TA12645 568 DVETYNK|LY 0.063 . TA12645 579 IDPDLPK|PT 0.070 . TA12645 589 EDLEYDR|GK 0.072 . TA12645 591 LEYDRGK|IH 0.063 . TA12645 594 DRGKIHK|SK 0.107 . TA12645 596 GKIHKSK|NR 0.065 . TA12645 598 IHKSKNR|NR 0.072 . TA12645 600 KSKNRNR|PN 0.099 . TA12645 612 VELVNHR|SG 0.095 . TA12645 622 NVAVEQK|NL 0.066 . ____________________________^_________________

  • Fasta :-

    >TA12645 ATGTCAAATGCGAGAACATATTTACCATATGTAATCGAGCTACACAATAAAAGTATAAAG TTTACCAAGTATAGTCCCAGTAATTCGGACTTATTAAATCATTCAAAATTAAACACAAAC GAAGATGATTCACAAAATAAATTTAAAACATTTCCAGTTTTAAAAAACCTAAAAAACAGT CAGATCAGGGGAATATACCACCTGCCTAAAGTAAAATGGGACGATGAGTCAATGACAATG GGAGCTGGGCTAAATAACCCAGGAATCAACATCTGTTATATGAATGTAATAATTCAGGTG TTGACACATACGCCGTTTTTAGCCTCATCCTTACTTAAGTCATACCACTCGAAAACATGC CTACATTACGAAAAGGATATATTTTGTATTATGTGCCTATTTGAAAATTATGTAAAGAAG TCATTTGCGTCACCGAACCCGTTAAATAATCCGTTTTACTCCATCGCAAAAAAGTTTATC TGGTCTAGATTTAAACTAGGCCACCAAGATGACGCATTCATATTCTTAAAACATTTTCTA GATTCTCTGTCAAAAGCATGTTACTTAAACTCAAAAGAGTCTGAGAAACAGGAAGATGGT TCTGAAACCACGTCTGGTCCAAAGGATTTTATCTCTAATGACCAAATTATGTCCACAGTA ATAGGAAGATTGTTTGGAGGCTATTTTAGAAATGTAATTGTTTGCAATAACTGTTCAAGG AAGTCGGAAAAGGTTGAAGAATTCTTCGATTTAGCAGTGGAAGTCACAAAAAGTAATAGA CTAATAGATTTGTTGTCAGAATTTGTACTACCAGAAAAGTTAACGAACGATAATAAGTAC TTTTGCAGTAACTGCAAGAGTTACCAGAACGCAAATAAATCATTGTCGATATACAAGGCA CCAAGAATATTAAACATAAATCTCAAAAGGTTTAATCTATATTCTAGCGTATACAAAAAA TCTTTGAAAGCTATTGAATTCCCACAACTCTTGTCAATCTCACTCAAGACTTCGGAAGAT TCATATACATGGCTCAATTACGATTTGTATGCAATAGTGTGCCACATTGGAAAGTCACTC CATATGGGACACTACATAACATTTATCAAGGGAAAACATGGTTTTTGGTATCGTTTTGAC GATTCAATAATACAGTGCGTTTCAGAATCAACAGTTTTATCTCATAACAACGACGTTTAT CTATTATTCTACTCGATTAACAACGAATCTGTTGGAGATTGTGACACAGCACTGAACCTG TTTTCCTATAGTAATATTTTAAAGGAGTCCAAATCCTCACAATCAGAACCAATTGCAACA CCTGAACGGGAACCCAGACGCTGTGAAATTGATATACTTTCATATTTTGGAGGGAACACG ATTTTTAAAAGATTTCTAAAGCACAGAAAGTTTAAAAACTACAATTTATTAAACATGAAG ATCCTGTCAAACATCCAAAGGATGAATAATTTGAAAAGAAAAATCAATTCAATAGTGACT AACAATCAAGAAAATAAAGAAACGATACAGAAGATTAATAAAAAGGAAAAAGAATCCAAG TTAAAGGATACTGATACAGATTTAAAGAGTGAAGTTAAATGTAGTTTAAAACACACATCA TTCATTGATGCAATTGGAGATGAAGATGTATCTGCAGAAATTGAGCTTTGGTCCGATGCT GAGGACGTAGAAACATATAATAAACTCTACGAACAAATCGACCCCGATTTACCGAAACCC ACAGAAGAAGATTTAGAGTACGACAGAGGGAAAATTCACAAGTCAAAGAACAGAAATCGA CCAAATCCAGCAAATGTCGAGTTAGTTAACCATCGCTCTGGCATTAATGTGGCAGTTGAA CAGAAGAATCTATTCGACAACACAGTGATTTCACCATAA
  • Download Fasta

  • Fasta :-

    MSNARTYLPYVIELHNKSIKFTKYSPSNSDLLNHSKLNTNEDDSQNKFKTFPVLKNLKNS QIRGIYHLPKVKWDDESMTMGAGLNNPGINICYMNVIIQVLTHTPFLASSLLKSYHSKTC LHYEKDIFCIMCLFENYVKKSFASPNPLNNPFYSIAKKFIWSRFKLGHQDDAFIFLKHFL DSLSKACYLNSKESEKQEDGSETTSGPKDFISNDQIMSTVIGRLFGGYFRNVIVCNNCSR KSEKVEEFFDLAVEVTKSNRLIDLLSEFVLPEKLTNDNKYFCSNCKSYQNANKSLSIYKA PRILNINLKRFNLYSSVYKKSLKAIEFPQLLSISLKTSEDSYTWLNYDLYAIVCHIGKSL HMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVYLLFYSINNESVGDCDTALNL FSYSNILKESKSSQSEPIATPEREPRRCEIDILSYFGGNTIFKRFLKHRKFKNYNLLNMK ILSNIQRMNNLKRKINSIVTNNQENKETIQKINKKEKESKLKDTDTDLKSEVKCSLKHTS FIDAIGDEDVSAEIELWSDAEDVETYNKLYEQIDPDLPKPTEEDLEYDRGKIHKSKNRNR PNPANVELVNHRSGINVAVEQKNLFDNTVISP

  • title: Active Site
  • coordinates: N86,C92,H364,D381
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA12645342 YSEDSYTWLN0.99unspTA12645342 YSEDSYTWLN0.99unspTA12645342 YSEDSYTWLN0.99unspTA12645433 SESKSSQSEP0.997unspTA12645194 SNSKESEKQE0.995unspTA12645242 SCSRKSEKVE0.997unsp

TA12645      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India