TA12710 | hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
TA12710OTHER0.9991060.0007560.000138
No Results

  • Fasta :-

    >TA12710 MGNAKSIANSIIFPAPQASYDHNLPELVWIPKNFASKDLNIDKPSSRSFPVLFIRSIKPS SLFFIYLHGLIKPELYDISEALGASIVAVEYPGYGISPEIQVTTGPSVNLRVIATFHFLL SLGVHPSSIVFFGRSIGTGPAACIAAHFVKKGIKCGGVILQAPYISIHKIVQEYFPLGSW LIDNFWDLEQALKDMSPSVPLLIIHGLLDEIVPVSHGQRLYDSYESENKMADFQPNSKHN YYSINEDLIVPIRKFLNKFNISTYNPPVEINLPSWCLTKSKNVLRRRKSNNTDKSYKSAI DSMRSLSIFHFCSFSFSSQLLED
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA12710.fa Sequence name : TA12710 Sequence length : 323 VALUES OF COMPUTED PARAMETERS Coef20 : 3.778 CoefTot : -0.549 ChDiff : 3 ZoneTo : 20 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.653 1.571 0.245 0.645 MesoH : 0.530 0.869 -0.052 0.417 MuHd_075 : 12.963 12.618 4.508 4.326 MuHd_095 : 18.877 19.273 7.017 5.206 MuHd_100 : 16.936 20.443 6.589 4.947 MuHd_105 : 13.778 17.674 4.998 4.229 Hmax_075 : 8.750 11.433 2.920 5.390 Hmax_095 : 12.688 17.300 2.751 5.250 Hmax_100 : 13.200 18.100 2.891 5.920 Hmax_105 : 14.200 14.700 2.674 5.420 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8400 0.1600 DFMC : 0.8805 0.1195
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 323 TA12710 MGNAKSIANSIIFPAPQASYDHNLPELVWIPKNFASKDLNIDKPSSRSFPVLFIRSIKPSSLFFIYLHGLIKPELYDISE 80 ALGASIVAVEYPGYGISPEIQVTTGPSVNLRVIATFHFLLSLGVHPSSIVFFGRSIGTGPAACIAAHFVKKGIKCGGVIL 160 QAPYISIHKIVQEYFPLGSWLIDNFWDLEQALKDMSPSVPLLIIHGLLDEIVPVSHGQRLYDSYESENKMADFQPNSKHN 240 YYSINEDLIVPIRKFLNKFNISTYNPPVEINLPSWCLTKSKNVLRRRKSNNTDKSYKSAIDSMRSLSIFHFCSFSFSSQL 320 LED 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA12710 5 --MGNAK|SI 0.086 . TA12710 32 ELVWIPK|NF 0.059 . TA12710 37 PKNFASK|DL 0.080 . TA12710 43 KDLNIDK|PS 0.069 . TA12710 47 IDKPSSR|SF 0.108 . TA12710 55 FPVLFIR|SI 0.138 . TA12710 58 LFIRSIK|PS 0.118 . TA12710 72 YLHGLIK|PE 0.056 . TA12710 111 GPSVNLR|VI 0.107 . TA12710 134 SIVFFGR|SI 0.316 . TA12710 150 IAAHFVK|KG 0.073 . TA12710 151 AAHFVKK|GI 0.175 . TA12710 154 FVKKGIK|CG 0.069 . TA12710 169 PYISIHK|IV 0.065 . TA12710 193 DLEQALK|DM 0.070 . TA12710 219 PVSHGQR|LY 0.098 . TA12710 229 SYESENK|MA 0.069 . TA12710 238 DFQPNSK|HN 0.060 . TA12710 253 DLIVPIR|KF 0.075 . TA12710 254 LIVPIRK|FL 0.091 . TA12710 258 IRKFLNK|FN 0.070 . TA12710 279 PSWCLTK|SK 0.074 . TA12710 281 WCLTKSK|NV 0.069 . TA12710 285 KSKNVLR|RR 0.076 . TA12710 286 SKNVLRR|RK 0.199 . TA12710 287 KNVLRRR|KS 0.111 . TA12710 288 NVLRRRK|SN 0.227 . TA12710 294 KSNNTDK|SY 0.110 . TA12710 297 NTDKSYK|SA 0.115 . TA12710 304 SAIDSMR|SL 0.177 . ____________________________^_________________

  • Fasta :-

    >TA12710 ATGGGAAATGCAAAATCAATTGCAAACTCAATAATATTCCCAGCCCCTCAAGCCTCGTAC GATCACAACCTTCCTGAATTAGTATGGATACCAAAGAATTTCGCATCAAAAGATTTAAAT ATCGATAAACCGTCCTCGAGATCCTTCCCAGTGTTGTTTATACGATCAATAAAACCGTCT AGCCTGTTCTTTATATACCTACACGGACTCATTAAGCCGGAACTGTACGATATATCAGAA GCTTTAGGAGCATCAATAGTAGCAGTTGAGTACCCAGGATATGGAATATCACCAGAGATA CAAGTGACAACAGGACCCTCGGTGAATTTGAGGGTCATCGCCACATTCCATTTCCTACTT TCACTGGGTGTGCATCCCAGCTCCATCGTCTTTTTCGGGAGATCTATAGGAACGGGACCG GCAGCATGCATTGCGGCACATTTCGTTAAAAAGGGAATTAAATGCGGAGGAGTGATACTA CAAGCACCGTACATTTCGATCCATAAGATCGTTCAGGAGTACTTTCCGCTCGGGTCGTGG CTAATTGATAATTTCTGGGACCTCGAACAAGCATTGAAGGATATGTCACCATCAGTGCCA CTCCTCATAATACACGGACTACTGGATGAGATAGTTCCAGTATCCCACGGACAGAGACTC TACGACTCGTACGAATCTGAGAATAAAATGGCAGACTTCCAACCCAACTCGAAACACAAC TACTACTCAATTAATGAAGACTTAATTGTTCCAATAAGGAAGTTCCTGAACAAGTTTAAC ATCTCAACATATAATCCACCAGTTGAAATAAACCTACCGAGTTGGTGCCTGACGAAATCT AAGAACGTCTTGAGAAGGAGAAAGTCAAACAACACTGATAAATCCTACAAGAGCGCCATT GATTCCATGAGATCTTTGAGTATTTTTCATTTTTGTTCATTTTCTTTTAGCTCTCAGCTC CTCGAGGACTAG
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  • Fasta :-

    MGNAKSIANSIIFPAPQASYDHNLPELVWIPKNFASKDLNIDKPSSRSFPVLFIRSIKPS SLFFIYLHGLIKPELYDISEALGASIVAVEYPGYGISPEIQVTTGPSVNLRVIATFHFLL SLGVHPSSIVFFGRSIGTGPAACIAAHFVKKGIKCGGVILQAPYISIHKIVQEYFPLGSW LIDNFWDLEQALKDMSPSVPLLIIHGLLDEIVPVSHGQRLYDSYESENKMADFQPNSKHN YYSINEDLIVPIRKFLNKFNISTYNPPVEINLPSWCLTKSKNVLRRRKSNNTDKSYKSAI DSMRSLSIFHFCSFSFSSQLLED

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA12710298 SKSYKSAIDS0.997unspTA12710298 SKSYKSAIDS0.997unspTA12710298 SKSYKSAIDS0.997unspTA1271046 SDKPSSRSFP0.99unspTA12710295 SNTDKSYKSA0.991unsp

TA12710      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India