TA13865 | proteasome subunit y, putative

_IDPredictionOTHERSPmTPCS_Position
TA13865OTHER0.9995460.0001070.000347
No Results

  • Fasta :-

    >TA13865 MNLQILPHQSINILNPMNNMNIVDNISGLDKMNMDKMNIMDNLNGLDHLENNVSLEMLEK KYEDIQMGTTIIGMKFMDGVILVADGRTSSGQIVANRVARKITRILPNIFMLRSGSAADS QTLSTIIRYHAQSLKQQLKPSGRYTTHIRDEMDIDEMNEFDEYKTNEYSIELMNGPLVKS LAKATHNLVHEYRNMLYCGVILAGVDELGSQIYNITLGGTLIEIDDFLATGSGSSFITAF LQDNYKKNSTQEDCLKLLKKSIEYAILNDNSSGGIMRAIIITKYKVKEYYFTLH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA13865.fa Sequence name : TA13865 Sequence length : 294 VALUES OF COMPUTED PARAMETERS Coef20 : 3.502 CoefTot : -1.381 ChDiff : -6 ZoneTo : 23 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.094 1.424 0.056 0.562 MesoH : -0.233 0.446 -0.284 0.291 MuHd_075 : 15.138 10.385 5.661 2.930 MuHd_095 : 24.566 22.187 9.120 5.007 MuHd_100 : 30.123 24.570 10.108 5.996 MuHd_105 : 28.963 21.168 9.844 5.489 Hmax_075 : 8.000 8.800 0.143 3.700 Hmax_095 : 12.300 14.200 1.391 4.610 Hmax_100 : 18.900 18.900 2.993 5.800 Hmax_105 : 10.325 15.400 2.406 3.474 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9431 0.0569 DFMC : 0.9173 0.0827
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 294 TA13865 MNLQILPHQSINILNPMNNMNIVDNISGLDKMNMDKMNIMDNLNGLDHLENNVSLEMLEKKYEDIQMGTTIIGMKFMDGV 80 ILVADGRTSSGQIVANRVARKITRILPNIFMLRSGSAADSQTLSTIIRYHAQSLKQQLKPSGRYTTHIRDEMDIDEMNEF 160 DEYKTNEYSIELMNGPLVKSLAKATHNLVHEYRNMLYCGVILAGVDELGSQIYNITLGGTLIEIDDFLATGSGSSFITAF 240 LQDNYKKNSTQEDCLKLLKKSIEYAILNDNSSGGIMRAIIITKYKVKEYYFTLH 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA13865 31 NISGLDK|MN 0.080 . TA13865 36 DKMNMDK|MN 0.062 . TA13865 60 SLEMLEK|KY 0.079 . TA13865 61 LEMLEKK|YE 0.133 . TA13865 75 TTIIGMK|FM 0.073 . TA13865 87 ILVADGR|TS 0.088 . TA13865 97 GQIVANR|VA 0.112 . TA13865 100 VANRVAR|KI 0.463 . TA13865 101 ANRVARK|IT 0.101 . TA13865 104 VARKITR|IL 0.092 . TA13865 113 PNIFMLR|SG 0.137 . TA13865 128 TLSTIIR|YH 0.147 . TA13865 135 YHAQSLK|QQ 0.055 . TA13865 139 SLKQQLK|PS 0.079 . TA13865 143 QLKPSGR|YT 0.153 . TA13865 149 RYTTHIR|DE 0.121 . TA13865 164 NEFDEYK|TN 0.067 . TA13865 179 MNGPLVK|SL 0.108 . TA13865 183 LVKSLAK|AT 0.068 . TA13865 193 NLVHEYR|NM 0.083 . TA13865 246 FLQDNYK|KN 0.074 . TA13865 247 LQDNYKK|NS 0.091 . TA13865 256 TQEDCLK|LL 0.064 . TA13865 259 DCLKLLK|KS 0.051 . TA13865 260 CLKLLKK|SI 0.182 . TA13865 277 SSGGIMR|AI 0.097 . TA13865 283 RAIIITK|YK 0.063 . TA13865 285 IIITKYK|VK 0.068 . TA13865 287 ITKYKVK|EY 0.070 . ____________________________^_________________

  • Fasta :-

    >TA13865 ATGAATCTACAAATTCTACCACATCAATCCATTAATATATTAAATCCCATGAACAATATG AACATTGTGGACAATATCAGTGGTTTGGATAAGATGAACATGGACAAAATGAACATTATG GACAATTTGAATGGTTTGGACCACTTAGAAAATAATGTTAGTTTGGAGATGTTGGAGAAG AAATATGAAGATATACAAATGGGTACAACAATAATTGGTATGAAATTTATGGATGGTGTG ATATTAGTAGCAGATGGACGTACATCATCAGGTCAAATAGTAGCAAATAGAGTTGCACGT AAAATAACAAGAATCTTACCAAATATTTTCATGTTAAGATCTGGAAGTGCTGCTGATTCA CAAACATTATCAACAATAATACGTTATCATGCACAATCATTAAAACAACAACTTAAACCA TCTGGTCGTTATACAACTCATATTAGAGATGAAATGGATATTGATGAAATGAATGAATTT GATGAATATAAAACAAATGAATATAGTATAGAATTGATGAATGGACCATTAGTGAAATCA TTAGCAAAAGCAACACATAATTTGGTACATGAATATCGAAATATGTTATATTGTGGTGTA ATATTGGCTGGTGTAGATGAATTAGGTTCACAAATATATAATATAACATTAGGTGGTACA TTAATTGAAATTGATGATTTTCTAGCTACAGGTTCCGGTTCATCATTTATTACAGCATTT TTACAAGACAATTATAAAAAAAATTCTACACAAGAAGATTGTCTAAAATTACTTAAAAAA AGTATTGAATATGCTATTTTAAATGATAACTCGTCTGGTGGTATTATGAGAGCTATTATT ATTACCAAATATAAAGTTAAAGAATATTATTTCACATTACATTAA
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  • Fasta :-

    MNLQILPHQSINILNPMNNMNIVDNISGLDKMNMDKMNIMDNLNGLDHLENNVSLEMLEK KYEDIQMGTTIIGMKFMDGVILVADGRTSSGQIVANRVARKITRILPNIFMLRSGSAADS QTLSTIIRYHAQSLKQQLKPSGRYTTHIRDEMDIDEMNEFDEYKTNEYSIELMNGPLVKS LAKATHNLVHEYRNMLYCGVILAGVDELGSQIYNITLGGTLIEIDDFLATGSGSSFITAF LQDNYKKNSTQEDCLKLLKKSIEYAILNDNSSGGIMRAIIITKYKVKEYYFTLH

  • title: active site
  • coordinates: T69,D85,R87,K101,S232,D269,S272,G273
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TA13865      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India