TA13875 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA13875OTHER0.9999970.0000010.000002
No Results

  • Fasta :-

    >TA13875 MEHVLDSNVNENTKLDNTKLDNKDLENVKSENVLKHEIKKKKKLKTKLKSVKNEKLDDKN LENNLENENLENEKPKIKKNAKLIKKTQLTNTNTTGTNTNTKGKGANDTFDTPGKGANFT ATECTTKDTKGVGEGTGTVGPSTVTEDKNISREKVAKLKKKFETKKNQSTYNKVINLFKQ HNLLTEQQNDEKNQLDDKKSSDDKKILNNENNSLNDKNSLDNVIINIESNTNKQNNTTNT TTGTTTNTTTATTTVGMNKIKGVKKITTVFGGYPVLTLTSSVILFVFLFQIILNKISFNG RCISKVLYPNDSKAYHTMFGYGACEYNLQQKIEEIGYIGTKANDKGWPSTLVSDENVVES TSTFDSPNYRGFTLFGGMNTNYIRNYKEYFRLFWSMFMHSGVLHLIFNLIAQTQILWIIE PDWGFFRSLSTFILSGFMGNLFAGVFEPSFTVVGSSGCMFGLIAALIPYCVENWSLLRSP IYIFAFAIIITIISFTFFNNTVSIYSHLGGWVGGLLWGFITLRSTFKLKDCAIKESLLLS FFKDKLNPDDKNKLKESFLIKQRKCINEIRIERRRKKFKQRIKNLIKYPIDYFKKGPYDI LIRIIPLILFVILIIILCSNLLIESIYNRMFLLNESSNLSQCCYTNAKSEIIFNRKVFWC FENYQTAINFCKI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA13875.fa Sequence name : TA13875 Sequence length : 673 VALUES OF COMPUTED PARAMETERS Coef20 : 3.284 CoefTot : 0.000 ChDiff : 28 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.506 3.329 0.612 0.995 MesoH : 1.312 1.357 0.148 0.589 MuHd_075 : 31.083 23.623 8.987 5.186 MuHd_095 : 20.199 16.574 6.570 4.510 MuHd_100 : 22.586 18.629 6.896 5.007 MuHd_105 : 18.514 15.836 5.195 4.245 Hmax_075 : 1.867 10.033 -1.280 2.473 Hmax_095 : -5.425 3.600 -3.641 1.480 Hmax_100 : -2.400 3.200 -3.152 1.640 Hmax_105 : -6.200 3.200 -4.315 1.640 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9928 0.0072 DFMC : 0.9942 0.0058
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 673 TA13875 MEHVLDSNVNENTKLDNTKLDNKDLENVKSENVLKHEIKKKKKLKTKLKSVKNEKLDDKNLENNLENENLENEKPKIKKN 80 AKLIKKTQLTNTNTTGTNTNTKGKGANDTFDTPGKGANFTATECTTKDTKGVGEGTGTVGPSTVTEDKNISREKVAKLKK 160 KFETKKNQSTYNKVINLFKQHNLLTEQQNDEKNQLDDKKSSDDKKILNNENNSLNDKNSLDNVIINIESNTNKQNNTTNT 240 TTGTTTNTTTATTTVGMNKIKGVKKITTVFGGYPVLTLTSSVILFVFLFQIILNKISFNGRCISKVLYPNDSKAYHTMFG 320 YGACEYNLQQKIEEIGYIGTKANDKGWPSTLVSDENVVESTSTFDSPNYRGFTLFGGMNTNYIRNYKEYFRLFWSMFMHS 400 GVLHLIFNLIAQTQILWIIEPDWGFFRSLSTFILSGFMGNLFAGVFEPSFTVVGSSGCMFGLIAALIPYCVENWSLLRSP 480 IYIFAFAIIITIISFTFFNNTVSIYSHLGGWVGGLLWGFITLRSTFKLKDCAIKESLLLSFFKDKLNPDDKNKLKESFLI 560 KQRKCINEIRIERRRKKFKQRIKNLIKYPIDYFKKGPYDILIRIIPLILFVILIIILCSNLLIESIYNRMFLLNESSNLS 640 QCCYTNAKSEIIFNRKVFWCFENYQTAINFCKI 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA13875 14 NVNENTK|LD 0.064 . TA13875 19 TKLDNTK|LD 0.067 . TA13875 23 NTKLDNK|DL 0.068 . TA13875 29 KDLENVK|SE 0.064 . TA13875 35 KSENVLK|HE 0.064 . TA13875 39 VLKHEIK|KK 0.061 . TA13875 40 LKHEIKK|KK 0.088 . TA13875 41 KHEIKKK|KK 0.087 . TA13875 42 HEIKKKK|KL 0.157 . TA13875 43 EIKKKKK|LK 0.098 . TA13875 45 KKKKKLK|TK 0.074 . TA13875 47 KKKLKTK|LK 0.072 . TA13875 49 KLKTKLK|SV 0.107 . TA13875 52 TKLKSVK|NE 0.059 . TA13875 55 KSVKNEK|LD 0.065 . TA13875 59 NEKLDDK|NL 0.067 . TA13875 74 ENLENEK|PK 0.058 . TA13875 76 LENEKPK|IK 0.075 . TA13875 78 NEKPKIK|KN 0.061 . TA13875 79 EKPKIKK|NA 0.113 . TA13875 82 KIKKNAK|LI 0.072 . TA13875 85 KNAKLIK|KT 0.068 . TA13875 86 NAKLIKK|TQ 0.082 . TA13875 102 GTNTNTK|GK 0.079 . TA13875 104 NTNTKGK|GA 0.104 . TA13875 115 TFDTPGK|GA 0.065 . TA13875 127 ATECTTK|DT 0.077 . TA13875 130 CTTKDTK|GV 0.097 . TA13875 148 STVTEDK|NI 0.067 . TA13875 152 EDKNISR|EK 0.083 . TA13875 154 KNISREK|VA 0.063 . TA13875 157 SREKVAK|LK 0.082 . TA13875 159 EKVAKLK|KK 0.063 . TA13875 160 KVAKLKK|KF 0.121 . TA13875 161 VAKLKKK|FE 0.144 . TA13875 165 KKKFETK|KN 0.062 . TA13875 166 KKFETKK|NQ 0.114 . TA13875 173 NQSTYNK|VI 0.063 . TA13875 179 KVINLFK|QH 0.059 . TA13875 192 EQQNDEK|NQ 0.058 . TA13875 198 KNQLDDK|KS 0.062 . TA13875 199 NQLDDKK|SS 0.137 . TA13875 204 KKSSDDK|KI 0.071 . TA13875 205 KSSDDKK|IL 0.143 . TA13875 217 NNSLNDK|NS 0.059 . TA13875 233 IESNTNK|QN 0.078 . TA13875 259 TTVGMNK|IK 0.071 . TA13875 261 VGMNKIK|GV 0.105 . TA13875 264 NKIKGVK|KI 0.069 . TA13875 265 KIKGVKK|IT 0.110 . TA13875 295 FQIILNK|IS 0.062 . TA13875 301 KISFNGR|CI 0.153 . TA13875 305 NGRCISK|VL 0.061 . TA13875 313 LYPNDSK|AY 0.060 . TA13875 331 EYNLQQK|IE 0.067 . TA13875 341 IGYIGTK|AN 0.072 . TA13875 345 GTKANDK|GW 0.061 . TA13875 370 FDSPNYR|GF 0.105 . TA13875 384 MNTNYIR|NY 0.085 . TA13875 387 NYIRNYK|EY 0.119 . TA13875 391 NYKEYFR|LF 0.081 . TA13875 427 PDWGFFR|SL 0.154 . TA13875 478 ENWSLLR|SP 0.091 . TA13875 523 WGFITLR|ST 0.115 . TA13875 527 TLRSTFK|LK 0.073 . TA13875 529 RSTFKLK|DC 0.081 . TA13875 534 LKDCAIK|ES 0.054 . TA13875 543 LLLSFFK|DK 0.060 . TA13875 545 LSFFKDK|LN 0.062 . TA13875 551 KLNPDDK|NK 0.059 . TA13875 553 NPDDKNK|LK 0.064 . TA13875 555 DDKNKLK|ES 0.062 . TA13875 561 KESFLIK|QR 0.064 . TA13875 563 SFLIKQR|KC 0.081 . TA13875 564 FLIKQRK|CI 0.104 . TA13875 570 KCINEIR|IE 0.073 . TA13875 573 NEIRIER|RR 0.117 . TA13875 574 EIRIERR|RK 0.130 . TA13875 575 IRIERRR|KK 0.191 . TA13875 576 RIERRRK|KF 0.230 . TA13875 577 IERRRKK|FK 0.380 . TA13875 579 RRRKKFK|QR 0.090 . TA13875 581 RKKFKQR|IK 0.097 . TA13875 583 KFKQRIK|NL 0.065 . TA13875 587 RIKNLIK|YP 0.066 . TA13875 594 YPIDYFK|KG 0.056 . TA13875 595 PIDYFKK|GP 0.102 . TA13875 603 PYDILIR|II 0.076 . TA13875 629 IESIYNR|MF 0.091 . TA13875 648 CCYTNAK|SE 0.069 . TA13875 655 SEIIFNR|KV 0.157 . TA13875 656 EIIFNRK|VF 0.071 . TA13875 672 TAINFCK|I- 0.072 . ____________________________^_________________

  • Fasta :-

    >TA13875 ATGGAACATGTATTGGATTCAAATGTTAATGAAAATACAAAATTAGATAATACAAAATTA GATAATAAAGATTTGGAAAATGTAAAATCAGAAAATGTATTGAAACATGAAATTAAAAAG AAGAAAAAATTAAAAACTAAACTTAAATCTGTAAAAAATGAAAAATTAGACGATAAAAAT TTAGAAAATAATTTAGAAAATGAAAATTTAGAAAATGAAAAACCGAAAATTAAAAAAAAT GCTAAATTGATTAAAAAAACACAATTAACCAATACTAATACCACTGGTACTAATACTAAT ACTAAGGGAAAGGGAGCAAATGACACTTTTGATACTCCGGGAAAGGGAGCTAATTTTACA GCTACAGAGTGTACTACTAAGGATACTAAAGGAGTTGGTGAGGGAACTGGTACTGTTGGA CCAAGCACCGTAACGGAGGATAAAAATATAAGTAGAGAAAAGGTAGCAAAATTAAAGAAA AAATTTGAAACTAAAAAAAATCAATCAACATATAATAAAGTTATTAATTTATTCAAACAA CATAATTTATTAACTGAACAACAAAATGATGAGAAAAATCAATTAGACGACAAAAAATCG TCAGATGATAAAAAAATATTAAATAATGAAAATAATTCATTAAATGATAAAAATTCATTA GATAATGTAATAATAAATATAGAATCCAATACAAATAAACAAAATAATACCACCAACACT ACTACTGGAACTACTACTAATACTACCACTGCTACTACTACTGTTGGTATGAATAAAATA AAAGGTGTAAAAAAAATAACGACAGTTTTTGGTGGATATCCAGTATTAACATTAACATCT TCAGTAATATTATTTGTATTTTTATTTCAAATTATATTAAATAAAATATCATTTAATGGT CGTTGTATTAGTAAAGTATTATATCCAAATGATTCTAAAGCTTATCATACAATGTTTGGT TATGGTGCATGTGAATATAATTTACAACAGAAAATAGAAGAAATTGGATATATAGGTACT AAAGCTAATGATAAAGGTTGGCCATCAACACTTGTAAGTGATGAAAATGTTGTTGAATCT ACTTCTACATTTGATTCACCTAATTATCGGGGATTCACATTATTCGGTGGAATGAATACT AATTATATACGTAATTATAAAGAATATTTTAGATTATTTTGGAGTATGTTTATGCATAGT GGAGTTTTACATTTAATATTTAATTTAATAGCACAAACACAAATATTATGGATTATTGAA CCAGATTGGGGATTTTTTCGTAGTTTAAGTACATTTATATTGTCAGGATTTATGGGTAAT TTATTTGCTGGTGTATTTGAACCTTCATTTACAGTAGTTGGTTCATCTGGTTGTATGTTC GGTCTTATTGCTGCACTTATACCATATTGTGTTGAAAATTGGTCATTATTACGTTCACCA ATTTATATTTTTGCATTTGCTATTATTATTACTATTATCAGTTTTACATTCTTCAATAAT ACCGTTTCTATATATTCTCATCTTGGTGGATGGGTTGGTGGATTACTTTGGGGATTTATA ACATTAAGATCAACATTTAAATTAAAAGATTGTGCTATAAAAGAATCTTTATTATTATCT TTTTTTAAAGATAAACTTAATCCTGATGATAAAAATAAATTAAAAGAATCTTTCTTAATT AAACAAAGAAAGTGTATAAATGAAATAAGAATAGAAAGAAGAAGAAAAAAGTTTAAACAA AGAATAAAAAATTTAATTAAATATCCAATTGATTATTTCAAAAAAGGACCTTACGATATA TTAATAAGAATTATACCACTCATATTATTTGTAATATTAATAATAATATTATGTTCAAAT TTATTAATAGAATCGATATATAATAGAATGTTTTTATTAAATGAATCATCAAATTTATCA CAATGTTGTTATACAAATGCTAAAAGTGAAATAATATTTAATAGAAAAGTTTTTTGGTGT TTTGAAAATTATCAAACTGCAATTAATTTCTGTAAAATTTAA
  • Download Fasta

  • Fasta :-

    MEHVLDSNVNENTKLDNTKLDNKDLENVKSENVLKHEIKKKKKLKTKLKSVKNEKLDDKN LENNLENENLENEKPKIKKNAKLIKKTQLTNTNTTGTNTNTKGKGANDTFDTPGKGANFT ATECTTKDTKGVGEGTGTVGPSTVTEDKNISREKVAKLKKKFETKKNQSTYNKVINLFKQ HNLLTEQQNDEKNQLDDKKSSDDKKILNNENNSLNDKNSLDNVIINIESNTNKQNNTTNT TTGTTTNTTTATTTVGMNKIKGVKKITTVFGGYPVLTLTSSVILFVFLFQIILNKISFNG RCISKVLYPNDSKAYHTMFGYGACEYNLQQKIEEIGYIGTKANDKGWPSTLVSDENVVES TSTFDSPNYRGFTLFGGMNTNYIRNYKEYFRLFWSMFMHSGVLHLIFNLIAQTQILWIIE PDWGFFRSLSTFILSGFMGNLFAGVFEPSFTVVGSSGCMFGLIAALIPYCVENWSLLRSP IYIFAFAIIITIISFTFFNNTVSIYSHLGGWVGGLLWGFITLRSTFKLKDCAIKESLLLS FFKDKLNPDDKNKLKESFLIKQRKCINEIRIERRRKKFKQRIKNLIKYPIDYFKKGPYDI LIRIIPLILFVILIIILCSNLLIESIYNRMFLLNESSNLSQCCYTNAKSEIIFNRKVFWC FENYQTAINFCKI

    No Results
    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA13875T2420.5230.038TA13875T2400.5090.020TA13875T2410.5050.082
IDSitePositionGscoreIscoreIDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA13875T2420.5230.038TA13875T2400.5090.020TA13875T2410.5050.082
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA13875362 SVESTSTFDS0.993unspTA13875362 SVESTSTFDS0.993unspTA13875362 SVESTSTFDS0.993unspTA1387550 STKLKSVKNE0.997unspTA13875200 SDDKKSSDDK0.992unsp

TA13875      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India