TA13905 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA13905OTHER0.9999460.0000380.000016
No Results

  • Fasta :-

    >TA13905 MTGTKDTKGTGTKANTTKANGTKVNIPKANNAKANLKVKTIGNIFDNKDTRINNELEKIR INDLKLVTSKTKFNKELIKLKDDSKHKDNPLRGRLVVCIFTSTAIIFTFFAQMIYNKTTF GGRCISRILYKNESNFIPIGHGACENNLLTNATKRVFMGPSEADKGWPIIKTTNIEREIK WYFPFETDSNTFQINSIFSFGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQI LWIIEPDWGFIRTFLLYFISGLGSSITSASLDPCFITIGSSGALYGLYGGLLPYIIVLGN ITISNFLDNFPHYFHCKNFYTIRQLDYIIKLIGIIGVLMGFTQNIDNYAHLGGCIFGLLW GFSTIRSISIFDACPRPTIDLDITPKRRSLNPPKGFPSYITTSSLVIYPLKELIIYLVLS PLRGYCLTKHRNVIIDLKGKNIKFSEETRNKFDFIFKRMEKNGTSVFKNRLREWIVRIIS ITLLVSPVTVLVHTYLDIAPKGAPIFPEGAFYILIISLVMTLLLFEEKMYSKFKPWGQMK FSGFAKCTCCYIKPEKLQRLQLPINTFWCFDDSDTANNLCQLQSGLDGGVINTTKAAALH LLGYLT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA13905.fa Sequence name : TA13905 Sequence length : 606 VALUES OF COMPUTED PARAMETERS Coef20 : 3.519 CoefTot : -2.869 ChDiff : 28 ZoneTo : 45 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.441 2.518 0.509 0.881 MesoH : 0.932 1.119 0.074 0.538 MuHd_075 : 27.069 10.392 8.150 4.890 MuHd_095 : 16.935 16.314 5.974 4.491 MuHd_100 : 15.191 11.818 4.992 3.709 MuHd_105 : 17.723 10.990 5.792 3.315 Hmax_075 : 8.700 0.117 -0.014 1.210 Hmax_095 : 2.400 6.100 -1.170 3.240 Hmax_100 : -3.300 10.400 -2.939 3.440 Hmax_105 : 6.417 8.983 0.067 3.440 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8869 0.1131 DFMC : 0.9234 0.0766
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 606 TA13905 MTGTKDTKGTGTKANTTKANGTKVNIPKANNAKANLKVKTIGNIFDNKDTRINNELEKIRINDLKLVTSKTKFNKELIKL 80 KDDSKHKDNPLRGRLVVCIFTSTAIIFTFFAQMIYNKTTFGGRCISRILYKNESNFIPIGHGACENNLLTNATKRVFMGP 160 SEADKGWPIIKTTNIEREIKWYFPFETDSNTFQINSIFSFGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQI 240 LWIIEPDWGFIRTFLLYFISGLGSSITSASLDPCFITIGSSGALYGLYGGLLPYIIVLGNITISNFLDNFPHYFHCKNFY 320 TIRQLDYIIKLIGIIGVLMGFTQNIDNYAHLGGCIFGLLWGFSTIRSISIFDACPRPTIDLDITPKRRSLNPPKGFPSYI 400 TTSSLVIYPLKELIIYLVLSPLRGYCLTKHRNVIIDLKGKNIKFSEETRNKFDFIFKRMEKNGTSVFKNRLREWIVRIIS 480 ITLLVSPVTVLVHTYLDIAPKGAPIFPEGAFYILIISLVMTLLLFEEKMYSKFKPWGQMKFSGFAKCTCCYIKPEKLQRL 560 QLPINTFWCFDDSDTANNLCQLQSGLDGGVINTTKAAALHLLGYLT 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .............................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA13905 5 --MTGTK|DT 0.065 . TA13905 8 TGTKDTK|GT 0.086 . TA13905 13 TKGTGTK|AN 0.071 . TA13905 18 TKANTTK|AN 0.101 . TA13905 23 TKANGTK|VN 0.070 . TA13905 28 TKVNIPK|AN 0.075 . TA13905 33 PKANNAK|AN 0.073 . TA13905 37 NAKANLK|VK 0.058 . TA13905 39 KANLKVK|TI 0.098 . TA13905 48 GNIFDNK|DT 0.072 . TA13905 51 FDNKDTR|IN 0.097 . TA13905 58 INNELEK|IR 0.062 . TA13905 60 NELEKIR|IN 0.093 . TA13905 65 IRINDLK|LV 0.082 . TA13905 70 LKLVTSK|TK 0.064 . TA13905 72 LVTSKTK|FN 0.064 . TA13905 75 SKTKFNK|EL 0.074 . TA13905 79 FNKELIK|LK 0.063 . TA13905 81 KELIKLK|DD 0.075 . TA13905 85 KLKDDSK|HK 0.065 . TA13905 87 KDDSKHK|DN 0.064 . TA13905 92 HKDNPLR|GR 0.082 . TA13905 94 DNPLRGR|LV 0.116 . TA13905 117 AQMIYNK|TT 0.070 . TA13905 123 KTTFGGR|CI 0.093 . TA13905 127 GGRCISR|IL 0.115 . TA13905 131 ISRILYK|NE 0.074 . TA13905 154 LLTNATK|RV 0.073 . TA13905 155 LTNATKR|VF 0.141 . TA13905 165 GPSEADK|GW 0.081 . TA13905 171 KGWPIIK|TT 0.066 . TA13905 177 KTTNIER|EI 0.088 . TA13905 180 NIEREIK|WY 0.141 . TA13905 209 LETNYIR|NY 0.076 . TA13905 212 NYIRNYK|EY 0.123 . TA13905 216 NYKEYFR|LF 0.079 . TA13905 225 WSMFMHK|GV 0.084 . TA13905 252 PDWGFIR|TF 0.070 . TA13905 317 PHYFHCK|NF 0.071 . TA13905 323 KNFYTIR|QL 0.112 . TA13905 330 QLDYIIK|LI 0.073 . TA13905 366 WGFSTIR|SI 0.119 . TA13905 376 IFDACPR|PT 0.089 . TA13905 386 DLDITPK|RR 0.056 . TA13905 387 LDITPKR|RS 0.137 . TA13905 388 DITPKRR|SL 0.167 . TA13905 394 RSLNPPK|GF 0.071 . TA13905 411 LVIYPLK|EL 0.064 . TA13905 423 LVLSPLR|GY 0.070 . TA13905 429 RGYCLTK|HR 0.068 . TA13905 431 YCLTKHR|NV 0.109 . TA13905 438 NVIIDLK|GK 0.061 . TA13905 440 IIDLKGK|NI 0.068 . TA13905 443 LKGKNIK|FS 0.077 . TA13905 449 KFSEETR|NK 0.091 . TA13905 451 SEETRNK|FD 0.067 . TA13905 457 KFDFIFK|RM 0.064 . TA13905 458 FDFIFKR|ME 0.183 . TA13905 461 IFKRMEK|NG 0.097 . TA13905 468 NGTSVFK|NR 0.056 . TA13905 470 TSVFKNR|LR 0.134 . TA13905 472 VFKNRLR|EW 0.081 . TA13905 477 LREWIVR|II 0.116 . TA13905 501 YLDIAPK|GA 0.067 . TA13905 528 LLLFEEK|MY 0.066 . TA13905 532 EEKMYSK|FK 0.066 . TA13905 534 KMYSKFK|PW 0.093 . TA13905 540 KPWGQMK|FS 0.088 . TA13905 546 KFSGFAK|CT 0.085 . TA13905 553 CTCCYIK|PE 0.059 . TA13905 556 CYIKPEK|LQ 0.058 . TA13905 559 KPEKLQR|LQ 0.085 . TA13905 595 GVINTTK|AA 0.068 . ____________________________^_________________

  • Fasta :-

    >TA13905 ATGACTGGTACTAAGGATACTAAGGGTACAGGTACTAAGGCTAATACTACTAAAGCTAAT GGTACTAAGGTTAATATTCCTAAGGCTAATAATGCTAAGGCCAATTTGAAGGTAAAAACA ATTGGTAATATATTTGATAATAAAGATACAAGAATAAATAATGAATTGGAGAAGATTAGA ATAAATGATTTGAAATTAGTAACAAGTAAAACGAAATTTAATAAAGAATTAATTAAATTA AAAGATGATTCAAAACATAAAGATAATCCTTTAAGAGGTCGACTTGTTGTTTGTATCTTC ACATCAACTGCTATCATCTTCACATTCTTTGCACAGATGATATATAATAAAACAACATTT GGTGGTAGATGTATATCTAGAATATTATATAAAAATGAGAGTAATTTTATACCTATTGGA CATGGTGCTTGTGAAAATAATTTATTAACTAATGCTACTAAACGAGTATTTATGGGACCA TCAGAAGCTGATAAAGGTTGGCCAATAATAAAAACAACAAATATTGAACGAGAAATCAAA TGGTATTTTCCATTTGAAACTGATTCCAATACATTTCAAATCAATTCTATCTTCTCATTT GGTGGTCTAGAAACTAATTATATTCGTAATTATAAAGAATATTTTAGATTATTTTGGAGT ATGTTTATGCATAAAGGCGTAGCACATTTATTAATAAATTTATTATCACAAATACAAATA TTATGGATTATTGAACCAGATTGGGGTTTTATTCGTACATTTTTATTATATTTTATAAGT GGATTGGGTAGTAGTATAACATCAGCATCATTAGATCCTTGTTTTATTACTATAGGATCA TCTGGTGCACTTTATGGTCTATATGGTGGTTTATTACCATATATTATTGTATTGGGTAAC ATTACCATATCCAATTTTCTTGATAATTTTCCTCATTATTTCCATTGTAAAAATTTTTAT ACAATTAGACAATTGGATTATATAATTAAATTAATTGGAATAATTGGAGTATTAATGGGA TTTACACAAAATATTGATAATTATGCACATCTTGGTGGATGTATATTTGGATTACTTTGG GGATTTAGTACAATTCGTAGTATATCAATATTTGATGCATGTCCACGGCCAACCATCGAC TTAGATATTACCCCTAAAAGGCGTTCTCTTAACCCCCCGAAGGGGTTCCCTAGTTATATC ACTACTAGTTCCTTAGTTATATATCCATTAAAGGAGTTAATTATATACTTAGTACTTAGT CCCCTCAGGGGGTACTGCTTGACCAAGCACCGTAATGTAATAATAGATTTGAAAGGAAAG AATATAAAGTTTAGTGAAGAAACTAGAAATAAATTTGATTTTATATTTAAACGTATGGAA AAAAATGGTACAAGTGTTTTTAAAAATAGATTACGTGAATGGATTGTACGAATTATTTCA ATTACACTTTTGGTATCTCCCGTTACGGTGCTTGTACACACCTACTTAGATATTGCCCCC AAAGGGGCTCCCATATTCCCCGAAGGGGCCTTCTATATATTGATAATAAGTTTGGTAATG ACATTATTATTATTTGAAGAGAAAATGTATAGTAAATTTAAGCCATGGGGACAAATGAAG TTTTCTGGATTTGCAAAATGTACTTGCTGTTATATTAAACCAGAAAAATTACAACGACTT CAATTACCAATTAATACTTTTTGGTGTTTTGATGATTCTGATACTGCCAATAATTTATGT CAACTTCAAAGTGGATTAGATGGAGGAGTAATTAATACAACTAAAGCTGCCGCACTACAT TTATTAGGATATCTTACATAA
  • Download Fasta

  • Fasta :-

    MTGTKDTKGTGTKANTTKANGTKVNIPKANNAKANLKVKTIGNIFDNKDTRINNELEKIR INDLKLVTSKTKFNKELIKLKDDSKHKDNPLRGRLVVCIFTSTAIIFTFFAQMIYNKTTF GGRCISRILYKNESNFIPIGHGACENNLLTNATKRVFMGPSEADKGWPIIKTTNIEREIK WYFPFETDSNTFQINSIFSFGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQI LWIIEPDWGFIRTFLLYFISGLGSSITSASLDPCFITIGSSGALYGLYGGLLPYIIVLGN ITISNFLDNFPHYFHCKNFYTIRQLDYIIKLIGIIGVLMGFTQNIDNYAHLGGCIFGLLW GFSTIRSISIFDACPRPTIDLDITPKRRSLNPPKGFPSYITTSSLVIYPLKELIIYLVLS PLRGYCLTKHRNVIIDLKGKNIKFSEETRNKFDFIFKRMEKNGTSVFKNRLREWIVRIIS ITLLVSPVTVLVHTYLDIAPKGAPIFPEGAFYILIISLVMTLLLFEEKMYSKFKPWGQMK FSGFAKCTCCYIKPEKLQRLQLPINTFWCFDDSDTANNLCQLQSGLDGGVINTTKAAALH LLGYLT

    No Results
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA13905T20.5650.393TA13905T40.5220.050
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA13905T20.5650.393TA13905T40.5220.050
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA13905369 SIRSISIFDA0.997unspTA13905389 SPKRRSLNPP0.992unsp

TA13905      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India