TA15335 | ubiquitin carboxyl-terminal hydrolase, putative

UniProt_ID: Q4UFF9

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459 GO:0008270
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity zinc ion binding
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA15335	OTHER	0.999995	0.000002	0.000003

No Results

Fasta :-
>TA15335 MVGRPKKSGGKRSKSSSPVPKSNPRAGRSPKLKPVKETPPKVEESTRTRSSRTSKRSLSS SKSSVSPSKSPSKSPPKRAKSSSKSPSRPKKGQKVNDESVLSHNNDKNLDETLTIAQCDE PLSSQNESSVPQVPVPPKVKVLNCPYLGTINRHLLDFDFEKVCSITLSNVHVYACLVCGK YFQGRGKNTYCYTHALEECHYLFMNLEDCRVYCIPENYPVDDASLDDIKHFLKPVYTKKD VQTLSTQVIYGKALDGTDFIPGCIGLNNLKNTDYFNVIIQLICVVEPLRNLFLVFDVNRV QPPDPVIITLSQLIRKIFNVKNFKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSLLSWLL ARIHQKLHNRNTKESVVTKTFGGELLIKTLKKTRWETERQPFRMLSLTVPEAPIFKDSMD SNAIPQAQIFELLSKYDGVTETVNANGDVCTYKLSKLPKYLILIIKRFTKNNFFLEKNPT IVSFPMKNLDLKDYVTEEIKDSVTRYDLYCNICHEGKPTGGIFKVHVYHAPSGNWFQMED LLVTSILPQQVALTESYVQVYKRQDLTTVPEEEVDMFS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA15335.fa Sequence name : TA15335 Sequence length : 578 VALUES OF COMPUTED PARAMETERS Coef20 : 3.498 CoefTot : -1.969 ChDiff : 20 ZoneTo : 36 KR : 12 DE : 0 CleavSite : 14 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.765 0.347 0.508 MesoH : -0.483 0.665 -0.318 0.272 MuHd_075 : 33.213 15.268 9.889 7.565 MuHd_095 : 32.608 14.680 7.948 7.386 MuHd_100 : 39.922 17.980 10.243 8.392 MuHd_105 : 43.500 20.110 11.774 8.656 Hmax_075 : 3.733 -3.383 -0.895 0.933 Hmax_095 : 0.600 -1.100 -1.861 1.180 Hmax_100 : 5.600 0.400 -0.271 1.480 Hmax_105 : 7.700 3.267 0.597 1.480 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1059 0.8941 DFMC : 0.1104 0.8896 This protein is probably imported in mitochondria. f(Ser) = 0.1944 f(Arg) = 0.1111 CMi = 0.86207 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 578 TA15335 MVGRPKKSGGKRSKSSSPVPKSNPRAGRSPKLKPVKETPPKVEESTRTRSSRTSKRSLSSSKSSVSPSKSPSKSPPKRAK 80 SSSKSPSRPKKGQKVNDESVLSHNNDKNLDETLTIAQCDEPLSSQNESSVPQVPVPPKVKVLNCPYLGTINRHLLDFDFE 160 KVCSITLSNVHVYACLVCGKYFQGRGKNTYCYTHALEECHYLFMNLEDCRVYCIPENYPVDDASLDDIKHFLKPVYTKKD 240 VQTLSTQVIYGKALDGTDFIPGCIGLNNLKNTDYFNVIIQLICVVEPLRNLFLVFDVNRVQPPDPVIITLSQLIRKIFNV 320 KNFKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSLLSWLLARIHQKLHNRNTKESVVTKTFGGELLIKTLKKTRWETERQ 400 PFRMLSLTVPEAPIFKDSMDSNAIPQAQIFELLSKYDGVTETVNANGDVCTYKLSKLPKYLILIIKRFTKNNFFLEKNPT 480 IVSFPMKNLDLKDYVTEEIKDSVTRYDLYCNICHEGKPTGGIFKVHVYHAPSGNWFQMEDLLVTSILPQQVALTESYVQV 560 YKRQDLTTVPEEEVDMFS 640 ......P................................................P........................ 80 ..........P..................................................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ TA15335 4 ---MVGR|PK 0.099 . TA15335 6 -MVGRPK|KS 0.069 . TA15335 7 MVGRPKK|SG 0.536 *ProP* TA15335 11 PKKSGGK|RS 0.054 . TA15335 12 KKSGGKR|SK 0.460 . TA15335 14 SGGKRSK|SS 0.121 . TA15335 21 SSSPVPK|SN 0.139 . TA15335 25 VPKSNPR|AG 0.074 . TA15335 28 SNPRAGR|SP 0.346 . TA15335 31 RAGRSPK|LK 0.154 . TA15335 33 GRSPKLK|PV 0.124 . TA15335 36 PKLKPVK|ET 0.066 . TA15335 41 VKETPPK|VE 0.060 . TA15335 47 KVEESTR|TR 0.074 . TA15335 49 EESTRTR|SS 0.166 . TA15335 52 TRTRSSR|TS 0.433 . TA15335 55 RSSRTSK|RS 0.139 . TA15335 56 SSRTSKR|SL 0.530 *ProP* TA15335 62 RSLSSSK|SS 0.067 . TA15335 69 SSVSPSK|SP 0.094 . TA15335 73 PSKSPSK|SP 0.070 . TA15335 77 PSKSPPK|RA 0.063 . TA15335 78 SKSPPKR|AK 0.338 . TA15335 80 SPPKRAK|SS 0.153 . TA15335 84 RAKSSSK|SP 0.091 . TA15335 88 SSKSPSR|PK 0.089 . TA15335 90 KSPSRPK|KG 0.064 . TA15335 91 SPSRPKK|GQ 0.517 *ProP* TA15335 94 RPKKGQK|VN 0.073 . TA15335 107 LSHNNDK|NL 0.073 . TA15335 138 QVPVPPK|VK 0.053 . TA15335 140 PVPPKVK|VL 0.055 . TA15335 152 YLGTINR|HL 0.082 . TA15335 161 LDFDFEK|VC 0.066 . TA15335 180 ACLVCGK|YF 0.063 . TA15335 185 GKYFQGR|GK 0.121 . TA15335 187 YFQGRGK|NT 0.068 . TA15335 210 MNLEDCR|VY 0.075 . TA15335 229 ASLDDIK|HF 0.056 . TA15335 233 DIKHFLK|PV 0.077 . TA15335 238 LKPVYTK|KD 0.065 . TA15335 239 KPVYTKK|DV 0.206 . TA15335 252 TQVIYGK|AL 0.069 . TA15335 270 IGLNNLK|NT 0.056 . TA15335 289 CVVEPLR|NL 0.072 . TA15335 299 LVFDVNR|VQ 0.070 . TA15335 315 TLSQLIR|KI 0.115 . TA15335 316 LSQLIRK|IF 0.077 . TA15335 321 RKIFNVK|NF 0.062 . TA15335 324 FNVKNFK|GI 0.059 . TA15335 345 VTNGLYK|IG 0.060 . TA15335 362 LSWLLAR|IH 0.079 . TA15335 366 LARIHQK|LH 0.065 . TA15335 370 HQKLHNR|NT 0.102 . TA15335 373 LHNRNTK|ES 0.116 . TA15335 379 KESVVTK|TF 0.099 . TA15335 388 GGELLIK|TL 0.059 . TA15335 391 LLIKTLK|KT 0.062 . TA15335 392 LIKTLKK|TR 0.105 . TA15335 394 KTLKKTR|WE 0.081 . TA15335 399 TRWETER|QP 0.106 . TA15335 403 TERQPFR|ML 0.112 . TA15335 416 PEAPIFK|DS 0.073 . TA15335 435 IFELLSK|YD 0.069 . TA15335 453 GDVCTYK|LS 0.056 . TA15335 456 CTYKLSK|LP 0.053 . TA15335 459 KLSKLPK|YL 0.099 . TA15335 466 YLILIIK|RF 0.058 . TA15335 467 LILIIKR|FT 0.164 . TA15335 470 IIKRFTK|NN 0.130 . TA15335 477 NNFFLEK|NP 0.059 . TA15335 487 IVSFPMK|NL 0.076 . TA15335 492 MKNLDLK|DY 0.075 . TA15335 500 YVTEEIK|DS 0.056 . TA15335 505 IKDSVTR|YD 0.081 . TA15335 517 NICHEGK|PT 0.085 . TA15335 524 PTGGIFK|VH 0.055 . TA15335 562 SYVQVYK|RQ 0.056 . TA15335 563 YVQVYKR|QD 0.162 . ____________________________^_________________

Fasta :-
>TA15335 ATGGTGGGAAGACCAAAGAAGTCAGGTGGAAAAAGATCGAAATCTTCTTCACCTGTGCCT AAATCTAACCCAAGAGCTGGAAGATCTCCTAAGCTTAAACCCGTTAAGGAAACTCCACCA AAAGTTGAGGAATCTACACGCACAAGGTCTTCAAGAACCTCTAAAAGATCGCTTTCAAGC AGTAAATCTTCAGTTTCACCTTCTAAATCACCTAGCAAATCACCACCTAAAAGGGCTAAA TCTTCATCTAAGTCTCCTTCAAGGCCTAAAAAAGGCCAGAAAGTTAATGATGAAAGTGTG TTATCTCATAACAACGATAAGAATTTGGATGAGACTCTGACTATCGCACAATGTGACGAA CCTTTGAGTTCTCAAAATGAATCTTCTGTACCTCAAGTTCCAGTTCCTCCCAAAGTTAAA GTATTGAATTGTCCATATTTGGGCACTATAAATCGTCACCTTTTGGACTTTGACTTTGAG AAGGTTTGCTCCATTACCCTCAGTAACGTTCACGTTTACGCTTGTCTCGTCTGCGGGAAG TACTTTCAAGGAAGAGGTAAAAACACCTACTGCTACACCCACGCACTCGAGGAATGCCAT TATTTGTTCATGAACCTCGAGGACTGCAGAGTCTACTGCATTCCAGAAAATTACCCAGTG GACGATGCCTCCCTTGATGATATTAAGCATTTTTTGAAACCCGTTTACACTAAGAAAGAT GTTCAAACCCTATCAACTCAAGTTATTTACGGAAAAGCATTAGATGGAACCGACTTCATT CCAGGTTGTATCGGATTAAATAACCTGAAAAACACTGACTATTTCAATGTAATAATACAG TTGATTTGTGTTGTGGAACCGCTGCGTAACTTGTTTCTTGTTTTTGACGTGAACAGGGTC CAGCCACCTGATCCAGTCATAATTACACTTTCTCAGCTCATCCGTAAAATCTTTAACGTT AAAAATTTCAAGGGCATTGTTTCACCTCACGAATTCGTTCAGTCTGTGGGAATTGTAACA AATGGATTATATAAGATTGGAGTGCAATCTGACCCGGTTTCCCTTTTATCTTGGCTTTTG GCAAGAATACACCAGAAGTTACATAACAGAAACACTAAAGAGAGTGTTGTTACCAAGACC TTCGGAGGCGAGCTACTCATCAAAACACTCAAAAAAACTCGTTGGGAAACTGAACGTCAG CCCTTCAGGATGTTAAGTTTAACTGTACCTGAAGCTCCAATTTTTAAGGATTCTATGGAT TCTAATGCTATTCCACAGGCACAGATATTTGAGTTGTTGAGTAAGTACGATGGAGTGACT GAAACCGTTAACGCAAATGGAGACGTTTGTACTTATAAGTTATCGAAGTTGCCGAAGTAC CTCATCTTGATCATCAAGCGCTTCACCAAAAACAACTTCTTCCTGGAAAAAAATCCCACT ATCGTCTCATTTCCGATGAAAAATCTAGACCTGAAAGATTATGTAACTGAGGAAATTAAG GATTCAGTAACGAGATATGATTTGTACTGTAACATATGTCACGAGGGGAAACCCACTGGA GGTATTTTTAAGGTCCATGTATACCATGCACCCTCTGGAAACTGGTTCCAAATGGAAGAT CTACTAGTAACTTCTATACTTCCACAACAAGTTGCTCTCACAGAATCATATGTTCAAGTA TACAAGAGACAAGATTTGACAACCGTGCCAGAGGAAGAAGTGGATATGTTTTCATAA
Download Fasta

Fasta :-

MVGRPKKSGGKRSKSSSPVPKSNPRAGRSPKLKPVKETPPKVEESTRTRSSRTSKRSLSS SKSSVSPSKSPSKSPPKRAKSSSKSPSRPKKGQKVNDESVLSHNNDKNLDETLTIAQCDE PLSSQNESSVPQVPVPPKVKVLNCPYLGTINRHLLDFDFEKVCSITLSNVHVYACLVCGK YFQGRGKNTYCYTHALEECHYLFMNLEDCRVYCIPENYPVDDASLDDIKHFLKPVYTKKD VQTLSTQVIYGKALDGTDFIPGCIGLNNLKNTDYFNVIIQLICVVEPLRNLFLVFDVNRV QPPDPVIITLSQLIRKIFNVKNFKGIVSPHEFVQSVGIVTNGLYKIGVQSDPVSLLSWLL ARIHQKLHNRNTKESVVTKTFGGELLIKTLKKTRWETERQPFRMLSLTVPEAPIFKDSMD SNAIPQAQIFELLSKYDGVTETVNANGDVCTYKLSKLPKYLILIIKRFTKNNFFLEKNPT IVSFPMKNLDLKDYVTEEIKDSVTRYDLYCNICHEGKPTGGIFKVHVYHAPSGNWFQMED LLVTSILPQQVALTESYVQVYKRQDLTTVPEEEVDMFS

Zf-UBP

title: Active Site
coordinates: N268,D273,I522,D540

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA15335	T	53	0.665	0.030	TA15335	S	74	0.652	0.050	TA15335	S	72	0.642	0.553	TA15335	S	61	0.604	0.029	TA15335	T	48	0.591	0.052	TA15335	S	68	0.590	0.543	TA15335	S	60	0.586	0.051	TA15335	T	38	0.571	0.152	TA15335	S	63	0.569	0.020	TA15335	S	64	0.560	0.037	TA15335	S	66	0.559	0.060	TA15335	S	57	0.557	0.021	TA15335	S	59	0.556	0.045	TA15335	T	46	0.553	0.027	TA15335	S	70	0.553	0.031	TA15335	S	81	0.534	0.028	TA15335	S	54	0.515	0.043	TA15335	S	51	0.506	0.029	TA15335	S	82	0.502	0.050

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	TA15335	T	53	0.665	0.030	TA15335	S	74	0.652	0.050	TA15335	S	72	0.642	0.553	TA15335	S	61	0.604	0.029	TA15335	T	48	0.591	0.052	TA15335	S	68	0.590	0.543	TA15335	S	60	0.586	0.051	TA15335	T	38	0.571	0.152	TA15335	S	63	0.569	0.020	TA15335	S	64	0.560	0.037	TA15335	S	66	0.559	0.060	TA15335	S	57	0.557	0.021	TA15335	S	59	0.556	0.045	TA15335	T	46	0.553	0.027	TA15335	S	70	0.553	0.031	TA15335	S	81	0.534	0.028	TA15335	S	54	0.515	0.043	TA15335	S	51	0.506	0.029	TA15335	S	82	0.502	0.050

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TA15335	50 S	TRTRSSRTS	0.994	unsp	TA15335	50 S	TRTRSSRTS	0.994	unsp	TA15335	50 S	TRTRSSRTS	0.994	unsp	TA15335	51 S	RTRSSRTSK	0.996	unsp	TA15335	54 S	SSRTSKRSL	0.998	unsp	TA15335	57 S	TSKRSLSSS	0.993	unsp	TA15335	59 S	KRSLSSSKS	0.995	unsp	TA15335	60 S	RSLSSSKSS	0.995	unsp	TA15335	64 S	SSKSSVSPS	0.994	unsp	TA15335	66 S	KSSVSPSKS	0.997	unsp	TA15335	70 S	SPSKSPSKS	0.993	unsp	TA15335	81 S	KRAKSSSKS	0.996	unsp	TA15335	82 S	RAKSSSKSP	0.992	unsp	TA15335	83 S	AKSSSKSPS	0.992	unsp	TA15335	85 S	SSSKSPSRP	0.998	unsp	TA15335	224 S	VDDASLDDI	0.991	unsp	TA15335	434 S	FELLSKYDG	0.993	unsp	TA15335	15 S	KRSKSSSPV	0.99	unsp	TA15335	17 S	SKSSSPVPK	0.992	unsp

TA15335 | ubiquitin carboxyl-terminal hydrolase, putative

ID's

UniProt_ID: Q4UFF9

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459 GO:0008270

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity zinc ion binding

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Zf-UBP

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA15335

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India