TA15700 | 26S proteasome ATPase subunit (Rpt6A homologue), putative

_IDPredictionOTHERSPmTPCS_Position
TA15700OTHER0.9997280.0000320.000240
No Results

  • Fasta :-

    >TA15700 MNNCLGLQSYYTHLIEDYQALLSQKLMTKSRLEAQRNELNLRVRELKDELHSLLESGSFV GEVVKSMCNDKILVKISLEGKYVVDLASDIDVSLVTPNTRVALMSDSYKLHKILPTKVDP LVALMKVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPEIFDSLGISQPKGVLLYGPPG TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPSIIFMDEIDS IGSSRGDGSSGGDSEVQRTMLELLNQLDGFEPFQNIKVIMCTNRIDILDEALLRPGRIDR KIEFPNPNAEGREQILRIHSKKMNLLRDIDLLEIAKSMSGCSGAEIKSVCTEAGMFALRE RRVHVTNEDFQMAVVKVMKKGEERGMSFKKLWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA15700.fa Sequence name : TA15700 Sequence length : 393 VALUES OF COMPUTED PARAMETERS Coef20 : 3.218 CoefTot : -0.748 ChDiff : -2 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.335 0.982 -0.071 0.389 MesoH : -0.664 0.406 -0.388 0.175 MuHd_075 : 29.448 21.987 10.156 6.106 MuHd_095 : 14.545 12.140 6.500 3.079 MuHd_100 : 22.581 17.731 8.558 4.228 MuHd_105 : 22.745 18.338 8.029 4.487 Hmax_075 : 14.467 14.583 4.104 5.810 Hmax_095 : 4.500 8.500 1.263 3.630 Hmax_100 : 7.700 8.500 1.437 3.630 Hmax_105 : 7.525 9.100 1.376 3.675 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9653 0.0347 DFMC : 0.9412 0.0588
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 393 TA15700 MNNCLGLQSYYTHLIEDYQALLSQKLMTKSRLEAQRNELNLRVRELKDELHSLLESGSFVGEVVKSMCNDKILVKISLEG 80 KYVVDLASDIDVSLVTPNTRVALMSDSYKLHKILPTKVDPLVALMKVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPE 160 IFDSLGISQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPSIIFMDEIDS 240 IGSSRGDGSSGGDSEVQRTMLELLNQLDGFEPFQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNAEGREQILRIHS 320 KKMNLLRDIDLLEIAKSMSGCSGAEIKSVCTEAGMFALRERRVHVTNEDFQMAVVKVMKKGEERGMSFKKLWK 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA15700 25 QALLSQK|LM 0.058 . TA15700 29 SQKLMTK|SR 0.074 . TA15700 31 KLMTKSR|LE 0.078 . TA15700 36 SRLEAQR|NE 0.076 . TA15700 42 RNELNLR|VR 0.070 . TA15700 44 ELNLRVR|EL 0.123 . TA15700 47 LRVRELK|DE 0.155 . TA15700 65 FVGEVVK|SM 0.068 . TA15700 71 KSMCNDK|IL 0.063 . TA15700 75 NDKILVK|IS 0.056 . TA15700 81 KISLEGK|YV 0.083 . TA15700 100 LVTPNTR|VA 0.072 . TA15700 109 LMSDSYK|LH 0.062 . TA15700 112 DSYKLHK|IL 0.064 . TA15700 117 HKILPTK|VD 0.059 . TA15700 126 PLVALMK|VE 0.056 . TA15700 129 ALMKVEK|VP 0.063 . TA15700 146 GLEEQIK|QV 0.091 . TA15700 149 EQIKQVK|EV 0.069 . TA15700 157 VIELPIK|HP 0.057 . TA15700 171 LGISQPK|GV 0.075 . TA15700 183 GPPGTGK|TL 0.059 . TA15700 188 GKTLLAR|AV 0.128 . TA15700 200 TECTFIR|VS 0.128 . TA15700 209 GSELVQK|YI 0.105 . TA15700 216 YIGEGSR|MV 0.115 . TA15700 219 EGSRMVR|EL 0.273 . TA15700 226 ELFVMAR|SH 0.134 . TA15700 245 DSIGSSR|GD 0.122 . TA15700 258 GDSEVQR|TM 0.107 . TA15700 277 EPFQNIK|VI 0.057 . TA15700 284 VIMCTNR|ID 0.079 . TA15700 294 LDEALLR|PG 0.072 . TA15700 297 ALLRPGR|ID 0.204 . TA15700 300 RPGRIDR|KI 0.272 . TA15700 301 PGRIDRK|IE 0.076 . TA15700 312 NPNAEGR|EQ 0.100 . TA15700 317 GREQILR|IH 0.106 . TA15700 321 ILRIHSK|KM 0.066 . TA15700 322 LRIHSKK|MN 0.099 . TA15700 327 KKMNLLR|DI 0.154 . TA15700 336 DLLEIAK|SM 0.069 . TA15700 347 CSGAEIK|SV 0.151 . TA15700 359 AGMFALR|ER 0.077 . TA15700 361 MFALRER|RV 0.114 . TA15700 362 FALRERR|VH 0.288 . TA15700 376 FQMAVVK|VM 0.070 . TA15700 379 AVVKVMK|KG 0.067 . TA15700 380 VVKVMKK|GE 0.102 . TA15700 384 MKKGEER|GM 0.094 . TA15700 389 ERGMSFK|KL 0.080 . TA15700 390 RGMSFKK|LW 0.109 . TA15700 393 SFKKLWK|-- 0.064 . ____________________________^_________________

  • Fasta :-

    >TA15700 ATGAATAACTGTTTGGGATTACAGTCATATTATACTCACTTGATTGAGGACTACCAGGCT CTACTGTCACAGAAGCTCATGACTAAGTCTCGTCTTGAGGCTCAGAGAAATGAACTTAAC CTACGTGTAAGAGAGCTGAAAGATGAACTACACAGCTTACTTGAATCAGGCTCCTTTGTG GGCGAGGTTGTCAAATCTATGTGCAATGACAAGATATTAGTAAAAATTAGCCTGGAAGGT AAGTATGTTGTTGATTTGGCCAGTGATATTGACGTTAGTTTGGTTACTCCAAACACAAGA GTTGCACTAATGTCTGATTCATACAAGTTACATAAAATTTTACCCACGAAAGTGGATCCT CTAGTTGCTCTGATGAAGGTTGAGAAGGTTCCTGATAGCACATACGACATGGTTGGTGGG CTTGAAGAACAAATAAAGCAAGTAAAAGAGGTTATAGAGCTACCTATTAAGCATCCTGAG ATTTTTGATTCACTTGGTATATCACAACCCAAAGGAGTACTGTTGTATGGCCCACCTGGC ACTGGAAAGACACTGCTGGCTAGAGCTGTGGCTCATCATACTGAGTGTACTTTCATAAGA GTTAGTGGATCAGAATTGGTTCAAAAGTATATCGGCGAGGGGAGCAGGATGGTCCGTGAA CTATTCGTAATGGCTAGAAGTCACGCTCCCAGCATAATTTTCATGGACGAAATTGATAGC ATTGGCAGTTCGAGGGGTGACGGGAGCAGTGGCGGTGATTCTGAGGTACAACGCACTATG CTCGAGCTTTTGAATCAGTTAGACGGGTTCGAGCCATTTCAGAACATTAAGGTAATAATG TGTACTAATAGAATTGACATTTTGGATGAAGCCTTGTTGAGGCCTGGTAGAATTGACCGG AAGATTGAGTTTCCAAACCCCAACGCCGAAGGAAGGGAGCAAATACTCAGGATCCACTCA AAGAAAATGAATCTTTTAAGGGATATTGACTTACTCGAAATCGCTAAAAGTATGTCTGGT TGCAGTGGAGCAGAGATCAAATCTGTTTGCACAGAGGCTGGAATGTTTGCCCTCAGGGAA AGGCGCGTTCATGTCACTAACGAGGATTTTCAGATGGCCGTCGTAAAGGTTATGAAGAAG GGTGAAGAAAGAGGCATGTCATTCAAGAAACTTTGGAAATAA
  • Download Fasta

  • Fasta :-

    MNNCLGLQSYYTHLIEDYQALLSQKLMTKSRLEAQRNELNLRVRELKDELHSLLESGSFV GEVVKSMCNDKILVKISLEGKYVVDLASDIDVSLVTPNTRVALMSDSYKLHKILPTKVDP LVALMKVEKVPDSTYDMVGGLEEQIKQVKEVIELPIKHPEIFDSLGISQPKGVLLYGPPG TGKTLLARAVAHHTECTFIRVSGSELVQKYIGEGSRMVRELFVMARSHAPSIIFMDEIDS IGSSRGDGSSGGDSEVQRTMLELLNQLDGFEPFQNIKVIMCTNRIDILDEALLRPGRIDR KIEFPNPNAEGREQILRIHSKKMNLLRDIDLLEIAKSMSGCSGAEIKSVCTEAGMFALRE RRVHVTNEDFQMAVVKVMKKGEERGMSFKKLWK

  • title: ATP binding site
  • coordinates: P178,P179,G180,T181,G182,K183,T184,L185,D236,N283
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA15700244 SSIGSSRGDG0.995unspTA15700244 SSIGSSRGDG0.995unspTA15700244 SSIGSSRGDG0.995unspTA15700250 SGDGSSGGDS0.997unspTA15700320 SLRIHSKKMN0.996unspTA15700133 SKVPDSTYDM0.997unspTA15700202 SFIRVSGSEL0.996unsp

TA15700      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India