TA15900 | proteasome subunit alpha type 1, putative

_IDPredictionOTHERSPmTPCS_Position
TA15900OTHER0.9999180.0000520.000031
No Results

  • Fasta :-

    >TA15900 MYRNQYDTDCITWSPQGRLFQVEYAMESVKQGTCCVGIKSNTHLVLCALKRKISKLAQVQ DKLYKVGEYIGVAMSGITSDAKMIISYMRNECLSNRFLYGCDITASQLVSLVSEKSQANT QVSSKRPFGVGLLVAGYDETTGLHLFETCPSGNVVEFNATAFGARCQSAKTYLERKIVNF SESDLNGLIYHAIKALKTTIPNDGEFDVDVISVGVVGKGTPWKILDSNFVQTFVDKVLT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA15900.fa Sequence name : TA15900 Sequence length : 239 VALUES OF COMPUTED PARAMETERS Coef20 : 3.722 CoefTot : -0.468 ChDiff : 2 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 1.200 0.157 0.469 MesoH : -0.462 0.290 -0.327 0.182 MuHd_075 : 28.039 15.013 7.723 6.219 MuHd_095 : 19.162 0.664 1.372 3.482 MuHd_100 : 15.699 2.630 0.860 2.837 MuHd_105 : 6.502 6.531 1.665 0.415 Hmax_075 : 4.083 2.917 0.306 2.170 Hmax_095 : -0.200 -3.600 -3.204 0.866 Hmax_100 : -0.200 -3.600 -2.549 0.430 Hmax_105 : -8.400 -5.700 -4.222 -0.548 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8991 0.1009 DFMC : 0.8525 0.1475
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 239 TA15900 MYRNQYDTDCITWSPQGRLFQVEYAMESVKQGTCCVGIKSNTHLVLCALKRKISKLAQVQDKLYKVGEYIGVAMSGITSD 80 AKMIISYMRNECLSNRFLYGCDITASQLVSLVSEKSQANTQVSSKRPFGVGLLVAGYDETTGLHLFETCPSGNVVEFNAT 160 AFGARCQSAKTYLERKIVNFSESDLNGLIYHAIKALKTTIPNDGEFDVDVISVGVVGKGTPWKILDSNFVQTFVDKVLT 240 ................................................................................ 80 ................................................................................ 160 ............................................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >TA15900 ATGTATAGAAACCAATATGACACTGATTGTATTACTTGGTCTCCACAAGGTCGTTTATTC CAGGTGGAATATGCTATGGAATCTGTTAAACAAGGTACTTGTTGTGTAGGCATAAAATCT AATACACATTTGGTTTTATGTGCTCTTAAACGTAAGATATCGAAATTAGCTCAAGTTCAA GATAAGCTTTATAAGGTTGGTGAATACATTGGTGTTGCTATGTCTGGTATAACATCTGAT GCTAAGATGATTATTTCCTATATGAGGAATGAATGTTTGAGTAATAGATTTTTATACGGA TGTGACATTACTGCTTCTCAACTTGTGTCTCTGGTTTCCGAAAAATCGCAGGCCAACACT CAAGTTTCTTCTAAAAGACCTTTTGGAGTTGGTCTTTTGGTTGCTGGTTATGATGAAACT ACTGGTTTACACTTGTTTGAAACTTGTCCTTCTGGAAATGTAGTTGAATTCAATGCTACT GCTTTTGGTGCTAGATGTCAATCTGCAAAAACATATCTAGAAAGGAAGATTGTAAACTTC TCAGAATCTGACTTGAATGGACTCATTTATCATGCTATAAAGGCTTTGAAGACTACAATA CCTAATGATGGAGAATTTGATGTTGATGTCATCTCAGTAGGTGTTGTTGGTAAGGGAACT CCATGGAAGATTTTAGATTCTAACTTTGTTCAAACTTTTGTAGATAAGGTACTAACCTGA
  • Download Fasta

  • Fasta :-

    MYRNQYDTDCITWSPQGRLFQVEYAMESVKQGTCCVGIKSNTHLVLCALKRKISKLAQVQ DKLYKVGEYIGVAMSGITSDAKMIISYMRNECLSNRFLYGCDITASQLVSLVSEKSQANT QVSSKRPFGVGLLVAGYDETTGLHLFETCPSGNVVEFNATAFGARCQSAKTYLERKIVNF SESDLNGLIYHAIKALKTTIPNDGEFDVDVISVGVVGKGTPWKILDSNFVQTFVDKVLT

  • title: active site
  • coordinates: T33,L49,R51,K62,A164
No Results
No Results
IDSitePeptideScoreMethod
TA15900123 SNTQVSSKRP0.995unsp

TA15900      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India