TA16070 | ubiquitin carboxyl-terminal hydrolase, putative

UniProt_ID: Q4UDH1

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0036459
Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA16070	OTHER	0.999798	0.000107	0.000095

No Results

Fasta :-
>TA16070 MGFFTDSGSSKHSEISSRSSSPSNDNSNLENRNIMYMLKNCLILSKDGNKKSICDEGVKF NGLENNLNNCYSNVVIQSLYSYHEFRNRMIKMKKSGGSISSELAKLYSKCVSQSDIQSTK GFLKKVCSTKDDFILGDQQDAHEFLTYILNAMIDEIRNIEDEYVKPKTFMSSKSGGKRKL EKRTWLNELVEGCVKSETRCHECDSVTGMTEPFITLSLNIFDNCDINLCLQRYCDDELLS GKNQFFCEKCDKYCDASKRIVFDLMPPLLILHLKRFKYTTKPGSSLCSVYERLPYSVVCS NVIQVNCKRHPCPIVYELFSIISHIGTSPDYGHYINISELGGSWFRCDDASILKLDDYHS EIGDETTSGNDASYILFYRIKE
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA16070.fa Sequence name : TA16070 Sequence length : 382 VALUES OF COMPUTED PARAMETERS Coef20 : 4.020 CoefTot : -0.250 ChDiff : -3 ZoneTo : 5 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.047 1.259 0.101 0.513 MesoH : -0.461 0.342 -0.286 0.194 MuHd_075 : 1.925 5.040 1.732 0.562 MuHd_095 : 30.076 11.492 5.654 4.628 MuHd_100 : 21.899 7.705 4.453 3.221 MuHd_105 : 12.539 1.742 3.512 1.568 Hmax_075 : 4.500 1.750 -1.593 1.692 Hmax_095 : 10.000 4.100 -0.697 3.090 Hmax_100 : 10.000 4.100 -0.697 3.090 Hmax_105 : 7.300 0.900 -0.964 2.370 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9370 0.0630 DFMC : 0.9393 0.0607

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 382 TA16070 MGFFTDSGSSKHSEISSRSSSPSNDNSNLENRNIMYMLKNCLILSKDGNKKSICDEGVKFNGLENNLNNCYSNVVIQSLY 80 SYHEFRNRMIKMKKSGGSISSELAKLYSKCVSQSDIQSTKGFLKKVCSTKDDFILGDQQDAHEFLTYILNAMIDEIRNIE 160 DEYVKPKTFMSSKSGGKRKLEKRTWLNELVEGCVKSETRCHECDSVTGMTEPFITLSLNIFDNCDINLCLQRYCDDELLS 240 GKNQFFCEKCDKYCDASKRIVFDLMPPLLILHLKRFKYTTKPGSSLCSVYERLPYSVVCSNVIQVNCKRHPCPIVYELFS 320 IISHIGTSPDYGHYINISELGGSWFRCDDASILKLDDYHSEIGDETTSGNDASYILFYRIKE 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA16070 11 TDSGSSK|HS 0.089 . TA16070 18 HSEISSR|SS 0.209 . TA16070 32 NSNLENR|NI 0.115 . TA16070 39 NIMYMLK|NC 0.054 . TA16070 46 NCLILSK|DG 0.059 . TA16070 50 LSKDGNK|KS 0.058 . TA16070 51 SKDGNKK|SI 0.209 . TA16070 59 ICDEGVK|FN 0.060 . TA16070 86 YSYHEFR|NR 0.094 . TA16070 88 YHEFRNR|MI 0.093 . TA16070 91 FRNRMIK|MK 0.203 . TA16070 93 NRMIKMK|KS 0.109 . TA16070 94 RMIKMKK|SG 0.161 . TA16070 105 ISSELAK|LY 0.091 . TA16070 109 LAKLYSK|CV 0.081 . TA16070 120 SDIQSTK|GF 0.070 . TA16070 124 STKGFLK|KV 0.075 . TA16070 125 TKGFLKK|VC 0.147 . TA16070 130 KKVCSTK|DD 0.086 . TA16070 157 AMIDEIR|NI 0.089 . TA16070 165 IEDEYVK|PK 0.052 . TA16070 167 DEYVKPK|TF 0.068 . TA16070 173 KTFMSSK|SG 0.080 . TA16070 177 SSKSGGK|RK 0.058 . TA16070 178 SKSGGKR|KL 0.248 . TA16070 179 KSGGKRK|LE 0.080 . TA16070 182 GKRKLEK|RT 0.071 . TA16070 183 KRKLEKR|TW 0.205 . TA16070 195 LVEGCVK|SE 0.061 . TA16070 199 CVKSETR|CH 0.076 . TA16070 232 INLCLQR|YC 0.112 . TA16070 242 DELLSGK|NQ 0.057 . TA16070 249 NQFFCEK|CD 0.058 . TA16070 252 FCEKCDK|YC 0.069 . TA16070 258 KYCDASK|RI 0.057 . TA16070 259 YCDASKR|IV 0.263 . TA16070 274 LLILHLK|RF 0.058 . TA16070 275 LILHLKR|FK 0.186 . TA16070 277 LHLKRFK|YT 0.067 . TA16070 281 RFKYTTK|PG 0.061 . TA16070 292 LCSVYER|LP 0.088 . TA16070 308 VIQVNCK|RH 0.055 . TA16070 309 IQVNCKR|HP 0.152 . TA16070 346 LGGSWFR|CD 0.093 . TA16070 354 DDASILK|LD 0.054 . TA16070 379 SYILFYR|IK 0.090 . TA16070 381 ILFYRIK|E- 0.065 . ____________________________^_________________

Fasta :-
>TA16070 ATGGGATTTTTTACTGATAGTGGCTCGTCCAAACATTCAGAAATTTCGTCAAGATCATCA TCGCCATCTAATGACAATTCTAACCTAGAAAATAGAAATATAATGTATATGCTGAAGAAT TGTTTAATTCTTTCCAAAGATGGTAATAAGAAATCTATATGTGATGAAGGTGTCAAATTC AATGGATTAGAAAACAATTTAAATAATTGTTATTCTAACGTAGTAATACAATCCCTATAT TCTTATCATGAATTCAGAAATCGAATGATAAAAATGAAAAAATCAGGCGGTTCGATTTCG TCAGAGCTTGCTAAACTATATAGTAAATGTGTTTCTCAATCTGATATTCAATCTACCAAA GGATTTTTGAAAAAAGTATGTAGTACAAAAGATGATTTCATACTCGGGGACCAGCAAGAT GCACACGAATTCTTGACTTATATATTGAATGCAATGATAGATGAAATCAGAAATATTGAA GACGAGTACGTAAAACCTAAAACATTTATGAGCTCCAAAAGTGGAGGGAAAAGAAAATTG GAAAAGAGAACATGGTTGAATGAGTTAGTAGAAGGATGTGTAAAATCTGAAACAAGATGT CATGAATGCGATAGCGTTACAGGTATGACGGAACCGTTCATAACACTCTCACTCAACATT TTCGATAACTGTGATATCAACCTTTGTTTACAGCGTTATTGCGATGATGAACTTCTCTCT GGTAAAAACCAGTTCTTTTGTGAGAAGTGTGATAAGTATTGTGACGCGTCGAAGAGAATA GTCTTTGACCTTATGCCACCTTTATTAATCCTGCACCTAAAGAGGTTCAAATATACCACT AAACCAGGAAGTTCCCTTTGTTCAGTATACGAAAGACTTCCATATTCAGTAGTGTGTTCT AACGTTATTCAGGTAAACTGTAAACGGCACCCATGTCCCATCGTTTATGAACTATTCTCA ATTATCTCTCACATCGGAACTTCCCCCGATTATGGACATTATATAAACATTTCTGAACTT GGAGGAAGTTGGTTTAGATGTGATGATGCTTCCATATTAAAACTCGACGATTATCACTCT GAAATCGGAGATGAAACCACCTCGGGGAACGACGCCAGTTATATCCTGTTTTATCGCATC AAAGAATAA
Download Fasta

Fasta :-

MGFFTDSGSSKHSEISSRSSSPSNDNSNLENRNIMYMLKNCLILSKDGNKKSICDEGVKF NGLENNLNNCYSNVVIQSLYSYHEFRNRMIKMKKSGGSISSELAKLYSKCVSQSDIQSTK GFLKKVCSTKDDFILGDQQDAHEFLTYILNAMIDEIRNIEDEYVKPKTFMSSKSGGKRKL EKRTWLNELVEGCVKSETRCHECDSVTGMTEPFITLSLNIFDNCDINLCLQRYCDDELLS GKNQFFCEKCDKYCDASKRIVFDLMPPLLILHLKRFKYTTKPGSSLCSVYERLPYSVVCS NVIQVNCKRHPCPIVYELFSIISHIGTSPDYGHYINISELGGSWFRCDDASILKLDDYHS EIGDETTSGNDASYILFYRIKE

Ubiquitin carboxyl-terminal hydrolase, UCH

title: Active Site
coordinates: N65,C70,H333,D349

	ID	Site	Position	Gscore	Iscore
	TA16070	T	5	0.551	0.067

	ID	Site	Position	Gscore	Iscore
	TA16070	T	5	0.551	0.067

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TA16070	21 S	SRSSSPSND	0.997	unsp	TA16070	21 S	SRSSSPSND	0.997	unsp	TA16070	21 S	SRSSSPSND	0.997	unsp	TA16070	81 S	QSLYSYHEF	0.993	unsp	TA16070	128 S	KKVCSTKDD	0.996	unsp	TA16070	240 S	DELLSGKNQ	0.993	unsp	TA16070	13 S	SSKHSEISS	0.995	unsp	TA16070	20 S	SSRSSSPSN	0.997	unsp

TA16070 | ubiquitin carboxyl-terminal hydrolase, putative

ID's

UniProt_ID: Q4UDH1

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0036459

Computed_GO_Functions: thiol-dependent ubiquitinyl hydrolase activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Ubiquitin carboxyl-terminal hydrolase, UCH

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA16070

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India