TA16460 | metalloprotease/cell division cycle protein (FtsH homologue), putative

_IDPredictionOTHERSPmTPCS_Position
TA16460OTHER0.9997660.0001480.000086
No Results

  • Fasta :-

    >TA16460 MYNNPDHRVPIVTNSRYTGHGFTEEGNISDINSDNTMQTRPVFQYDDMNDESYRFTTASG ENDLLLSHSDANLQYYYPSNASVNFNKYSQQHRTGLGFQVPYECINTSQNADSNGSSKIT TEISSGFSSFIGFFTKFSKEASSKSVDVFTTILSIAKSFFLNVIGIALGVFLSMLFFTII SFLLYNGKNIKDFKNEPKKKSPPPTPPPKTQIKQQDPPPKPEVTFEPVHFKDILGIDEAK EDVQEIVKFIKQPFLYKKVGAKVPKGILLVGPPGTGKTMLAKAVATETGIPFIYTSGPEF VEIYVGQGAQRIRALFQKARKIAPCIIFIDEIDAVGSKRATGSLSGQNREHDQTLNQLLV EMDGFNVSTGITILAATNRLSALDRALLRPGRFDRVVHIPLPSIQGREEILQHYLKDVNY NKESINVKELSKITPGYSGADLKNLVNEAALITVKQDRLMVELADLYEARDKIIMGNKRK LLMPDIERKMTAYHEAGHALVAYYLYPNTDPIHKATIITRGTALGFVEQLPNDDYDKSSY KLIEMKSRLAVCMAGRLAEKLVFGSDNVTSGASSDIIVATDLAYKMITQYGMSNKLASLN FHNLNNLNNKLSTDLNVKIENEIIELIREAEHIAESILRRKRSQLELLASELLKYETLTG DQITTLLKTNKSLNLPINGLPEESSDLEKDAKANAKTDSSSETNADEGVNAKTETNTDNT PTNSETNSNTEGDNDTHNDVDNNDVNDSDNNDDNVSDKNDDNDTNNDTDNTSPDNNNSEM DTDDTKNDNDDVNDSEDAPNDDDNS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA16460.fa Sequence name : TA16460 Sequence length : 805 VALUES OF COMPUTED PARAMETERS Coef20 : 3.271 CoefTot : -2.056 ChDiff : -34 ZoneTo : 23 KR : 2 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.612 2.553 0.487 0.917 MesoH : 0.784 1.039 -0.059 0.440 MuHd_075 : 14.695 6.911 3.723 2.435 MuHd_095 : 13.691 8.970 2.897 3.310 MuHd_100 : 13.695 11.640 3.640 2.422 MuHd_105 : 13.420 15.559 6.617 2.204 Hmax_075 : 2.800 2.100 -2.011 1.400 Hmax_095 : 1.800 0.788 -2.167 1.566 Hmax_100 : 1.800 2.200 -0.672 1.970 Hmax_105 : -0.263 6.417 -1.550 1.374 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9933 0.0067 DFMC : 0.9861 0.0139
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 805 TA16460 MYNNPDHRVPIVTNSRYTGHGFTEEGNISDINSDNTMQTRPVFQYDDMNDESYRFTTASGENDLLLSHSDANLQYYYPSN 80 ASVNFNKYSQQHRTGLGFQVPYECINTSQNADSNGSSKITTEISSGFSSFIGFFTKFSKEASSKSVDVFTTILSIAKSFF 160 LNVIGIALGVFLSMLFFTIISFLLYNGKNIKDFKNEPKKKSPPPTPPPKTQIKQQDPPPKPEVTFEPVHFKDILGIDEAK 240 EDVQEIVKFIKQPFLYKKVGAKVPKGILLVGPPGTGKTMLAKAVATETGIPFIYTSGPEFVEIYVGQGAQRIRALFQKAR 320 KIAPCIIFIDEIDAVGSKRATGSLSGQNREHDQTLNQLLVEMDGFNVSTGITILAATNRLSALDRALLRPGRFDRVVHIP 400 LPSIQGREEILQHYLKDVNYNKESINVKELSKITPGYSGADLKNLVNEAALITVKQDRLMVELADLYEARDKIIMGNKRK 480 LLMPDIERKMTAYHEAGHALVAYYLYPNTDPIHKATIITRGTALGFVEQLPNDDYDKSSYKLIEMKSRLAVCMAGRLAEK 560 LVFGSDNVTSGASSDIIVATDLAYKMITQYGMSNKLASLNFHNLNNLNNKLSTDLNVKIENEIIELIREAEHIAESILRR 640 KRSQLELLASELLKYETLTGDQITTLLKTNKSLNLPINGLPEESSDLEKDAKANAKTDSSSETNADEGVNAKTETNTDNT 720 PTNSETNSNTEGDNDTHNDVDNNDVNDSDNNDDNVSDKNDDNDTNNDTDNTSPDNNNSEMDTDDTKNDNDDVNDSEDAPN 800 DDDNS 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ..........................................................................P..... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .P.............................................................................. 720 ................................................................................ 800 ..... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ TA16460 8 YNNPDHR|VP 0.073 . TA16460 16 PIVTNSR|YT 0.132 . TA16460 40 DNTMQTR|PV 0.143 . TA16460 54 MNDESYR|FT 0.133 . TA16460 87 ASVNFNK|YS 0.087 . TA16460 93 KYSQQHR|TG 0.082 . TA16460 118 DSNGSSK|IT 0.074 . TA16460 136 FIGFFTK|FS 0.065 . TA16460 139 FFTKFSK|EA 0.066 . TA16460 144 SKEASSK|SV 0.130 . TA16460 157 TILSIAK|SF 0.072 . TA16460 188 FLLYNGK|NI 0.059 . TA16460 191 YNGKNIK|DF 0.067 . TA16460 194 KNIKDFK|NE 0.059 . TA16460 198 DFKNEPK|KK 0.064 . TA16460 199 FKNEPKK|KS 0.089 . TA16460 200 KNEPKKK|SP 0.153 . TA16460 209 PPTPPPK|TQ 0.067 . TA16460 213 PPKTQIK|QQ 0.069 . TA16460 220 QQDPPPK|PE 0.069 . TA16460 231 FEPVHFK|DI 0.080 . TA16460 240 LGIDEAK|ED 0.064 . TA16460 248 DVQEIVK|FI 0.059 . TA16460 251 EIVKFIK|QP 0.061 . TA16460 257 KQPFLYK|KV 0.086 . TA16460 258 QPFLYKK|VG 0.101 . TA16460 262 YKKVGAK|VP 0.063 . TA16460 265 VGAKVPK|GI 0.080 . TA16460 277 GPPGTGK|TM 0.058 . TA16460 282 GKTMLAK|AV 0.089 . TA16460 311 VGQGAQR|IR 0.071 . TA16460 313 QGAQRIR|AL 0.111 . TA16460 318 IRALFQK|AR 0.072 . TA16460 320 ALFQKAR|KI 0.106 . TA16460 321 LFQKARK|IA 0.084 . TA16460 338 IDAVGSK|RA 0.070 . TA16460 339 DAVGSKR|AT 0.197 . TA16460 349 SLSGQNR|EH 0.163 . TA16460 379 ILAATNR|LS 0.076 . TA16460 385 RLSALDR|AL 0.105 . TA16460 389 LDRALLR|PG 0.073 . TA16460 392 ALLRPGR|FD 0.179 . TA16460 395 RPGRFDR|VV 0.566 *ProP* TA16460 407 LPSIQGR|EE 0.107 . TA16460 416 ILQHYLK|DV 0.088 . TA16460 422 KDVNYNK|ES 0.060 . TA16460 428 KESINVK|EL 0.091 . TA16460 432 NVKELSK|IT 0.054 . TA16460 443 YSGADLK|NL 0.059 . TA16460 455 AALITVK|QD 0.056 . TA16460 458 ITVKQDR|LM 0.074 . TA16460 470 ADLYEAR|DK 0.111 . TA16460 472 LYEARDK|II 0.061 . TA16460 478 KIIMGNK|RK 0.053 . TA16460 479 IIMGNKR|KL 0.109 . TA16460 480 IMGNKRK|LL 0.088 . TA16460 488 LMPDIER|KM 0.072 . TA16460 489 MPDIERK|MT 0.100 . TA16460 514 NTDPIHK|AT 0.063 . TA16460 520 KATIITR|GT 0.095 . TA16460 537 PNDDYDK|SS 0.076 . TA16460 541 YDKSSYK|LI 0.065 . TA16460 546 YKLIEMK|SR 0.073 . TA16460 548 LIEMKSR|LA 0.088 . TA16460 556 AVCMAGR|LA 0.106 . TA16460 560 AGRLAEK|LV 0.071 . TA16460 585 ATDLAYK|MI 0.068 . TA16460 595 QYGMSNK|LA 0.076 . TA16460 610 LNNLNNK|LS 0.064 . TA16460 618 STDLNVK|IE 0.056 . TA16460 628 EIIELIR|EA 0.105 . TA16460 639 IAESILR|RK 0.080 . TA16460 640 AESILRR|KR 0.168 . TA16460 641 ESILRRK|RS 0.070 . TA16460 642 SILRRKR|SQ 0.599 *ProP* TA16460 654 LASELLK|YE 0.071 . TA16460 668 QITTLLK|TN 0.051 . TA16460 671 TLLKTNK|SL 0.080 . TA16460 689 ESSDLEK|DA 0.090 . TA16460 692 DLEKDAK|AN 0.065 . TA16460 696 DAKANAK|TD 0.077 . TA16460 712 DEGVNAK|TE 0.061 . TA16460 758 DDNVSDK|ND 0.066 . TA16460 786 MDTDDTK|ND 0.059 . ____________________________^_________________

  • Fasta :-

    >TA16460 ATGTATAACAATCCAGATCATAGGGTCCCTATCGTGACCAACTCGAGATACACTGGACAT GGATTCACAGAAGAAGGAAACATTAGCGATATAAATTCTGATAATACAATGCAAACAAGA CCTGTGTTCCAATATGACGATATGAACGATGAATCCTATCGATTTACTACAGCTTCCGGT GAAAATGATCTCTTATTGTCACATTCTGATGCGAATCTTCAGTATTATTACCCAAGTAAC GCAAGCGTTAATTTTAACAAATACTCACAACAGCACAGAACGGGATTGGGATTCCAAGTA CCATACGAATGTATCAACACATCACAAAATGCTGATTCCAATGGATCTTCCAAAATCACA ACAGAAATCTCATCAGGTTTCAGCTCATTTATCGGATTCTTTACTAAATTCTCCAAAGAA GCATCGTCAAAGTCAGTCGATGTCTTCACAACCATTTTGTCTATCGCTAAATCATTCTTC CTTAACGTAATTGGTATAGCTCTGGGAGTATTTTTGTCCATGCTGTTCTTCACAATCATC TCATTCCTTTTATATAACGGAAAGAATATTAAAGATTTCAAAAACGAACCAAAGAAGAAG AGTCCGCCACCAACGCCACCACCAAAGACTCAAATTAAACAACAAGATCCACCTCCGAAG CCCGAGGTTACATTCGAGCCCGTTCATTTCAAAGACATCTTAGGTATCGACGAAGCAAAG GAAGATGTCCAGGAAATAGTCAAGTTCATAAAGCAGCCATTTCTGTACAAAAAGGTCGGA GCAAAGGTTCCCAAGGGCATTTTGTTAGTAGGCCCACCGGGAACGGGAAAGACAATGTTG GCAAAAGCCGTGGCCACAGAAACCGGGATACCGTTTATATACACAAGTGGTCCTGAATTT GTTGAAATATATGTCGGACAAGGAGCACAGAGGATAAGAGCCTTGTTCCAAAAAGCCCGA AAAATAGCTCCATGTATAATATTTATAGATGAGATCGATGCAGTGGGATCTAAAAGAGCA ACAGGCTCTCTGAGCGGACAAAATCGAGAACACGACCAGACATTAAATCAGCTTCTAGTT GAAATGGACGGATTCAACGTTTCAACTGGAATCACAATTCTAGCAGCAACAAATAGACTC AGCGCACTAGATAGAGCACTTCTAAGACCCGGTAGATTCGATCGAGTTGTGCACATACCC CTCCCAAGCATTCAGGGGAGGGAGGAAATTTTACAGCATTACCTGAAGGACGTCAACTAC AATAAGGAAAGTATAAACGTAAAAGAACTTTCTAAAATAACCCCAGGATACTCTGGAGCA GACTTAAAAAACTTAGTTAATGAAGCAGCACTGATAACAGTAAAACAAGATCGATTAATG GTTGAGTTGGCTGATTTGTACGAGGCTAGAGATAAAATAATCATGGGAAATAAGAGGAAG CTATTAATGCCCGACATTGAGAGAAAAATGACAGCGTACCATGAAGCAGGCCATGCACTA GTGGCCTATTACCTTTACCCAAACACAGATCCAATACATAAGGCAACAATAATAACCAGA GGAACAGCCTTGGGATTTGTGGAACAGCTTCCAAACGACGACTATGATAAAAGCAGCTAT AAACTTATCGAGATGAAGTCGAGGCTTGCAGTTTGTATGGCTGGAAGATTAGCTGAGAAG CTGGTTTTTGGCTCCGATAATGTAACATCCGGAGCATCTTCTGATATCATAGTTGCGACT GACCTCGCATACAAAATGATAACCCAGTATGGAATGTCTAATAAACTCGCCTCACTAAAC TTCCACAACTTAAATAACTTAAACAACAAACTAAGCACGGATCTCAACGTTAAGATCGAA AATGAAATAATAGAGTTAATAAGGGAGGCAGAACACATAGCTGAGTCGATATTAAGAAGA AAGAGAAGTCAGCTTGAGCTTCTCGCATCAGAATTGCTCAAATACGAGACTTTAACTGGT GATCAGATAACAACGCTTTTGAAGACGAACAAATCGCTAAATCTTCCAATCAACGGCCTA CCAGAAGAATCTAGTGATCTTGAAAAGGACGCAAAAGCCAACGCTAAAACCGACTCAAGT TCTGAAACTAACGCTGATGAAGGCGTGAATGCCAAAACTGAAACAAACACCGACAACACA CCCACCAACAGTGAAACTAATTCAAATACTGAAGGTGATAACGATACCCATAACGATGTT GATAACAACGATGTTAATGATTCGGATAACAATGATGATAACGTTTCCGATAAGAATGAT GATAACGATACTAATAACGATACCGATAACACAAGCCCCGACAATAACAATTCAGAAATG GATACTGACGATACTAAGAATGATAATGATGATGTCAATGATAGTGAAGACGCTCCGAAT GATGACGATAACTCCTAA
  • Download Fasta

  • Fasta :-

    MYNNPDHRVPIVTNSRYTGHGFTEEGNISDINSDNTMQTRPVFQYDDMNDESYRFTTASG ENDLLLSHSDANLQYYYPSNASVNFNKYSQQHRTGLGFQVPYECINTSQNADSNGSSKIT TEISSGFSSFIGFFTKFSKEASSKSVDVFTTILSIAKSFFLNVIGIALGVFLSMLFFTII SFLLYNGKNIKDFKNEPKKKSPPPTPPPKTQIKQQDPPPKPEVTFEPVHFKDILGIDEAK EDVQEIVKFIKQPFLYKKVGAKVPKGILLVGPPGTGKTMLAKAVATETGIPFIYTSGPEF VEIYVGQGAQRIRALFQKARKIAPCIIFIDEIDAVGSKRATGSLSGQNREHDQTLNQLLV EMDGFNVSTGITILAATNRLSALDRALLRPGRFDRVVHIPLPSIQGREEILQHYLKDVNY NKESINVKELSKITPGYSGADLKNLVNEAALITVKQDRLMVELADLYEARDKIIMGNKRK LLMPDIERKMTAYHEAGHALVAYYLYPNTDPIHKATIITRGTALGFVEQLPNDDYDKSSY KLIEMKSRLAVCMAGRLAEKLVFGSDNVTSGASSDIIVATDLAYKMITQYGMSNKLASLN FHNLNNLNNKLSTDLNVKIENEIIELIREAEHIAESILRRKRSQLELLASELLKYETLTG DQITTLLKTNKSLNLPINGLPEESSDLEKDAKANAKTDSSSETNADEGVNAKTETNTDNT PTNSETNSNTEGDNDTHNDVDNNDVNDSDNNDDNVSDKNDDNDTNNDTDNTSPDNNNSEM DTDDTKNDNDDVNDSEDAPNDDDNS

  • title: ATP binding site
  • coordinates: P272,P273,G274,T275,G276,K277,T278,M279,D330,N378
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA16460T2100.6580.046TA16460T2050.5530.692
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA16460T2100.6580.046TA16460T2050.5530.692
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA16460756 SDDNVSDKND0.991unspTA16460756 SDDNVSDKND0.991unspTA16460756 SDDNVSDKND0.991unspTA16460778 SDNNNSEMDT0.994unspTA16460201 SPKKKSPPPT0.991unspTA16460701 STDSSSETNA0.994unsp

TA16460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India