TA17225 | 26s protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
TA17225OTHER0.9999890.0000050.000006
No Results

  • Fasta :-

    >TA17225 MASEAVVQKSTTTDIDLYTKLKELERQLELCEIQENYIKEEHKNLKLELIRARNEIKRIQ SVPLVIGQFLDIIDKNYGIVSSTAGSNYYVRILSTINRELLTPNTSVALHRHSHSVVDIL PPEADSSIQMLQVSEKPDVTYADIGGMDSQKQEIKEAVELPLTCPSLYKQIGIDPPVGVL LYGPPGTGKTMLAKAVAHHTDATFIRFVGSEFVQKYLGEGPRMVRDIFRLARENAPSILF IDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNASVKVIMATNRADTLDPALLR PGRLDRKIEFPLPDRRQRRLIFQTITSKMNLSNDIDLETFVARPEKISAADIAAICLEAG LQAIRKNRYVVTTKDFEQGWKRIVKKHDQDHPFYGV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA17225.fa Sequence name : TA17225 Sequence length : 396 VALUES OF COMPUTED PARAMETERS Coef20 : 3.980 CoefTot : 0.253 ChDiff : -3 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.888 1.335 0.062 0.524 MesoH : -0.551 0.227 -0.377 0.213 MuHd_075 : 27.920 20.891 8.049 5.519 MuHd_095 : 12.478 9.462 4.735 2.733 MuHd_100 : 6.557 6.076 3.082 1.450 MuHd_105 : 0.386 2.285 1.280 0.922 Hmax_075 : 14.583 12.717 2.209 4.118 Hmax_095 : 4.375 7.087 -0.521 2.555 Hmax_100 : 1.200 6.400 -0.559 2.300 Hmax_105 : 12.133 11.550 2.035 3.372 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9233 0.0767 DFMC : 0.9482 0.0518
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 396 TA17225 MASEAVVQKSTTTDIDLYTKLKELERQLELCEIQENYIKEEHKNLKLELIRARNEIKRIQSVPLVIGQFLDIIDKNYGIV 80 SSTAGSNYYVRILSTINRELLTPNTSVALHRHSHSVVDILPPEADSSIQMLQVSEKPDVTYADIGGMDSQKQEIKEAVEL 160 PLTCPSLYKQIGIDPPVGVLLYGPPGTGKTMLAKAVAHHTDATFIRFVGSEFVQKYLGEGPRMVRDIFRLARENAPSILF 240 IDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNASVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQRRL 320 IFQTITSKMNLSNDIDLETFVARPEKISAADIAAICLEAGLQAIRKNRYVVTTKDFEQGWKRIVKKHDQDHPFYGV 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..............................................................................P. 320 ............................................................................ 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA17225 9 SEAVVQK|ST 0.103 . TA17225 20 DIDLYTK|LK 0.055 . TA17225 22 DLYTKLK|EL 0.070 . TA17225 26 KLKELER|QL 0.097 . TA17225 39 IQENYIK|EE 0.060 . TA17225 43 YIKEEHK|NL 0.061 . TA17225 46 EEHKNLK|LE 0.056 . TA17225 51 LKLELIR|AR 0.077 . TA17225 53 LELIRAR|NE 0.085 . TA17225 57 RARNEIK|RI 0.067 . TA17225 58 ARNEIKR|IQ 0.204 . TA17225 75 FLDIIDK|NY 0.061 . TA17225 91 GSNYYVR|IL 0.143 . TA17225 98 ILSTINR|EL 0.090 . TA17225 111 TSVALHR|HS 0.123 . TA17225 136 MLQVSEK|PD 0.066 . TA17225 151 GGMDSQK|QE 0.065 . TA17225 155 SQKQEIK|EA 0.067 . TA17225 169 TCPSLYK|QI 0.075 . TA17225 189 GPPGTGK|TM 0.059 . TA17225 194 GKTMLAK|AV 0.090 . TA17225 206 TDATFIR|FV 0.301 . TA17225 215 GSEFVQK|YL 0.112 . TA17225 222 YLGEGPR|MV 0.148 . TA17225 225 EGPRMVR|DI 0.205 . TA17225 229 MVRDIFR|LA 0.112 . TA17225 232 DIFRLAR|EN 0.210 . TA17225 250 VDAIATK|RF 0.064 . TA17225 251 DAIATKR|FD 0.186 . TA17225 260 AQTGADR|EV 0.095 . TA17225 264 ADREVQR|IL 0.115 . TA17225 283 DQNASVK|VI 0.068 . TA17225 290 VIMATNR|AD 0.076 . TA17225 300 LDPALLR|PG 0.069 . TA17225 303 ALLRPGR|LD 0.217 . TA17225 306 RPGRLDR|KI 0.309 . TA17225 307 PGRLDRK|IE 0.069 . TA17225 315 EFPLPDR|RQ 0.064 . TA17225 316 FPLPDRR|QR 0.104 . TA17225 318 LPDRRQR|RL 0.256 . TA17225 319 PDRRQRR|LI 0.604 *ProP* TA17225 328 FQTITSK|MN 0.054 . TA17225 343 LETFVAR|PE 0.086 . TA17225 346 FVARPEK|IS 0.116 . TA17225 365 AGLQAIR|KN 0.074 . TA17225 366 GLQAIRK|NR 0.076 . TA17225 368 QAIRKNR|YV 0.462 . TA17225 374 RYVVTTK|DF 0.085 . TA17225 381 DFEQGWK|RI 0.058 . TA17225 382 FEQGWKR|IV 0.264 . TA17225 385 GWKRIVK|KH 0.133 . TA17225 386 WKRIVKK|HD 0.146 . ____________________________^_________________

  • Fasta :-

    >TA17225 ATGGCTTCTGAAGCTGTTGTTCAAAAGTCTACTACTACTGATATTGACTTATATACTAAA CTTAAGGAACTTGAACGACAGTTAGAATTATGCGAGATTCAAGAAAATTATATTAAAGAG GAGCATAAGAACTTGAAACTTGAGCTTATCAGAGCCAGGAATGAAATCAAACGTATTCAA AGCGTCCCTTTGGTAATTGGCCAATTTTTGGACATTATAGACAAAAATTACGGAATTGTA TCCTCAACTGCAGGATCTAACTATTATGTTCGCATTCTTTCAACCATTAACAGGGAATTG CTAACACCTAACACTAGTGTTGCATTACATAGGCATAGTCATAGCGTTGTCGATATTTTG CCGCCAGAAGCAGATTCTTCCATCCAAATGTTACAAGTTTCTGAAAAACCGGATGTAACT TACGCGGACATTGGAGGAATGGATTCCCAAAAGCAGGAAATAAAAGAAGCAGTAGAACTT CCCCTAACTTGTCCATCACTTTATAAGCAAATCGGGATAGACCCTCCAGTTGGTGTTTTA TTATATGGTCCTCCTGGGACCGGGAAAACTATGTTGGCGAAGGCAGTTGCACACCACACC GACGCAACTTTTATACGTTTTGTTGGTTCTGAATTCGTTCAAAAGTACCTGGGTGAAGGA CCCAGAATGGTGAGAGATATCTTCAGATTGGCCAGAGAGAACGCTCCTAGCATTTTATTC ATCGATGAAGTAGATGCGATCGCAACAAAGAGATTTGATGCACAAACAGGTGCAGATAGG GAAGTGCAGAGGATCCTTTTAGAGCTTCTTAACCAGATGGATGGGTTTGATCAAAATGCC TCAGTAAAGGTGATTATGGCAACGAACAGAGCAGATACACTTGATCCTGCACTTTTAAGA CCAGGGAGACTTGACAGAAAAATAGAATTCCCACTTCCAGATAGAAGACAAAGAAGATTA ATTTTTCAAACAATTACCAGTAAAATGAATTTATCAAACGATATTGATCTAGAAACATTT GTTGCAAGACCAGAGAAGATATCAGCAGCCGACATAGCTGCCATTTGTCTAGAGGCTGGC TTACAGGCAATTAGAAAGAATAGATACGTCGTGACTACCAAAGATTTTGAACAGGGCTGG AAGCGAATCGTTAAAAAACACGACCAGGATCACCCGTTTTATGGAGTTTAA
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  • Fasta :-

    MASEAVVQKSTTTDIDLYTKLKELERQLELCEIQENYIKEEHKNLKLELIRARNEIKRIQ SVPLVIGQFLDIIDKNYGIVSSTAGSNYYVRILSTINRELLTPNTSVALHRHSHSVVDIL PPEADSSIQMLQVSEKPDVTYADIGGMDSQKQEIKEAVELPLTCPSLYKQIGIDPPVGVL LYGPPGTGKTMLAKAVAHHTDATFIRFVGSEFVQKYLGEGPRMVRDIFRLARENAPSILF IDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNASVKVIMATNRADTLDPALLR PGRLDRKIEFPLPDRRQRRLIFQTITSKMNLSNDIDLETFVARPEKISAADIAAICLEAG LQAIRKNRYVVTTKDFEQGWKRIVKKHDQDHPFYGV

  • title: ATP binding site
  • coordinates: P184,P185,G186,T187,G188,K189,T190,M191,D242,N289
No Results
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TA17225      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India