TA18005 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA18005OTHER0.9984740.0007630.000763
No Results

  • Fasta :-

    >TA18005 MQNKIRNTRLENNGIVMFTLDVSTEVEEYKFEILRQSPHGIPTYTYLPFKNFKIVSVVEK SIPIWSPKVQGEVCTKVTVCTRDGPILVHIIIESPEGKEASIYYVKEKKSWREVTLNTFY SLFNHLALNKSVLEYVTLNIGSVIDRTHFSLNSTPDKPFKIIVPYPGYVLSRVFDGINTI WKSRFCDDHCTYVNIFYNNKKPILIHLAISKRRSEERLFFKKVLMSWKQISKDEYIESLN ELGFDLTVFNNHVTFDFSDPDKYKFVVQRTYNMDIMSEIFSPLPGYSVKRVVDDERIIWE SNTMDQCIFARFYSRNKIALLCHLLVTDSKENKILYFMKDGENWSLVDKRTFYYFLSNKD DPIYTHRGIGVDKKGDRKLLMSHFRNKQGLLIRTYCCKVDNPKGNIILIHGSCGHFKSQF CSYDMDWHYERFGYPILPYMKDFTNIKMDSFYKDLNFDNKTCEVYKDVFGWSKLDGIDAF EISPRFQYNGTFLESLNNMGFNVYGMDSQSHGLSESVPDSKFYINEFKDYVNDVLQFVDI VKRGNFESTKEEWNEDFVYSVSSDNVDLKCYLSGFSLGGNIAILAVQEFHKNAKPGVRFV DGLFILSGVLNIDNNLDTFAKKFTIALIKFTSLMTPRTQQNPLENSFLFSDSFEMFSRYK DPTFYNDRLFYKTVELLFGACKDILKNMKYYPDKLPTLFIHVSDDPMCDVNGQRNVVYNY LKDKSDVKLVELKGNTHHLVLSHIFPNVMPIINDWVLSHSSKSSFKFN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA18005.fa Sequence name : TA18005 Sequence length : 768 VALUES OF COMPUTED PARAMETERS Coef20 : 4.172 CoefTot : -0.144 ChDiff : 2 ZoneTo : 10 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.459 1.524 0.304 0.617 MesoH : -0.407 0.526 -0.355 0.269 MuHd_075 : 11.777 19.848 7.084 4.210 MuHd_095 : 5.737 5.466 1.549 1.773 MuHd_100 : 13.999 8.897 3.160 4.070 MuHd_105 : 21.281 10.928 4.314 5.485 Hmax_075 : 1.283 11.433 0.131 2.940 Hmax_095 : -0.200 7.000 -2.268 2.210 Hmax_100 : -0.200 7.000 -2.021 2.210 Hmax_105 : -8.225 1.983 -3.971 0.569 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7672 0.2328 DFMC : 0.7487 0.2513
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 768 TA18005 MQNKIRNTRLENNGIVMFTLDVSTEVEEYKFEILRQSPHGIPTYTYLPFKNFKIVSVVEKSIPIWSPKVQGEVCTKVTVC 80 TRDGPILVHIIIESPEGKEASIYYVKEKKSWREVTLNTFYSLFNHLALNKSVLEYVTLNIGSVIDRTHFSLNSTPDKPFK 160 IIVPYPGYVLSRVFDGINTIWKSRFCDDHCTYVNIFYNNKKPILIHLAISKRRSEERLFFKKVLMSWKQISKDEYIESLN 240 ELGFDLTVFNNHVTFDFSDPDKYKFVVQRTYNMDIMSEIFSPLPGYSVKRVVDDERIIWESNTMDQCIFARFYSRNKIAL 320 LCHLLVTDSKENKILYFMKDGENWSLVDKRTFYYFLSNKDDPIYTHRGIGVDKKGDRKLLMSHFRNKQGLLIRTYCCKVD 400 NPKGNIILIHGSCGHFKSQFCSYDMDWHYERFGYPILPYMKDFTNIKMDSFYKDLNFDNKTCEVYKDVFGWSKLDGIDAF 480 EISPRFQYNGTFLESLNNMGFNVYGMDSQSHGLSESVPDSKFYINEFKDYVNDVLQFVDIVKRGNFESTKEEWNEDFVYS 560 VSSDNVDLKCYLSGFSLGGNIAILAVQEFHKNAKPGVRFVDGLFILSGVLNIDNNLDTFAKKFTIALIKFTSLMTPRTQQ 640 NPLENSFLFSDSFEMFSRYKDPTFYNDRLFYKTVELLFGACKDILKNMKYYPDKLPTLFIHVSDDPMCDVNGQRNVVYNY 720 LKDKSDVKLVELKGNTHHLVLSHIFPNVMPIINDWVLSHSSKSSFKFN 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA18005 4 ---MQNK|IR 0.060 . TA18005 6 -MQNKIR|NT 0.098 . TA18005 9 NKIRNTR|LE 0.232 . TA18005 30 TEVEEYK|FE 0.062 . TA18005 35 YKFEILR|QS 0.097 . TA18005 50 YTYLPFK|NF 0.059 . TA18005 53 LPFKNFK|IV 0.122 . TA18005 60 IVSVVEK|SI 0.095 . TA18005 68 IPIWSPK|VQ 0.076 . TA18005 76 QGEVCTK|VT 0.058 . TA18005 82 KVTVCTR|DG 0.084 . TA18005 98 IESPEGK|EA 0.086 . TA18005 106 ASIYYVK|EK 0.057 . TA18005 108 IYYVKEK|KS 0.067 . TA18005 109 YYVKEKK|SW 0.153 . TA18005 112 KEKKSWR|EV 0.136 . TA18005 130 NHLALNK|SV 0.077 . TA18005 146 IGSVIDR|TH 0.089 . TA18005 157 LNSTPDK|PF 0.077 . TA18005 160 TPDKPFK|II 0.076 . TA18005 172 PGYVLSR|VF 0.098 . TA18005 182 GINTIWK|SR 0.075 . TA18005 184 NTIWKSR|FC 0.113 . TA18005 200 NIFYNNK|KP 0.054 . TA18005 201 IFYNNKK|PI 0.104 . TA18005 211 IHLAISK|RR 0.058 . TA18005 212 HLAISKR|RS 0.195 . TA18005 213 LAISKRR|SE 0.225 . TA18005 217 KRRSEER|LF 0.128 . TA18005 221 EERLFFK|KV 0.075 . TA18005 222 ERLFFKK|VL 0.088 . TA18005 228 KVLMSWK|QI 0.080 . TA18005 232 SWKQISK|DE 0.062 . TA18005 262 DFSDPDK|YK 0.081 . TA18005 264 SDPDKYK|FV 0.089 . TA18005 269 YKFVVQR|TY 0.104 . TA18005 289 LPGYSVK|RV 0.088 . TA18005 290 PGYSVKR|VV 0.326 . TA18005 296 RVVDDER|II 0.094 . TA18005 311 DQCIFAR|FY 0.116 . TA18005 315 FARFYSR|NK 0.092 . TA18005 317 RFYSRNK|IA 0.054 . TA18005 330 LLVTDSK|EN 0.058 . TA18005 333 TDSKENK|IL 0.075 . TA18005 339 KILYFMK|DG 0.067 . TA18005 349 NWSLVDK|RT 0.067 . TA18005 350 WSLVDKR|TF 0.157 . TA18005 359 YYFLSNK|DD 0.061 . TA18005 367 DPIYTHR|GI 0.117 . TA18005 373 RGIGVDK|KG 0.070 . TA18005 374 GIGVDKK|GD 0.133 . TA18005 377 VDKKGDR|KL 0.072 . TA18005 378 DKKGDRK|LL 0.074 . TA18005 385 LLMSHFR|NK 0.092 . TA18005 387 MSHFRNK|QG 0.065 . TA18005 393 KQGLLIR|TY 0.086 . TA18005 398 IRTYCCK|VD 0.068 . TA18005 403 CKVDNPK|GN 0.071 . TA18005 417 GSCGHFK|SQ 0.101 . TA18005 431 MDWHYER|FG 0.122 . TA18005 441 PILPYMK|DF 0.064 . TA18005 447 KDFTNIK|MD 0.059 . TA18005 453 KMDSFYK|DL 0.067 . TA18005 460 DLNFDNK|TC 0.069 . TA18005 466 KTCEVYK|DV 0.086 . TA18005 473 DVFGWSK|LD 0.059 . TA18005 485 AFEISPR|FQ 0.110 . TA18005 521 ESVPDSK|FY 0.069 . TA18005 528 FYINEFK|DY 0.065 . TA18005 542 QFVDIVK|RG 0.053 . TA18005 543 FVDIVKR|GN 0.163 . TA18005 550 GNFESTK|EE 0.062 . TA18005 569 SDNVDLK|CY 0.069 . TA18005 591 AVQEFHK|NA 0.076 . TA18005 594 EFHKNAK|PG 0.064 . TA18005 598 NAKPGVR|FV 0.147 . TA18005 621 NLDTFAK|KF 0.066 . TA18005 622 LDTFAKK|FT 0.119 . TA18005 629 FTIALIK|FT 0.070 . TA18005 637 TSLMTPR|TQ 0.083 . TA18005 658 SFEMFSR|YK 0.102 . TA18005 660 EMFSRYK|DP 0.061 . TA18005 668 PTFYNDR|LF 0.071 . TA18005 672 NDRLFYK|TV 0.082 . TA18005 682 LLFGACK|DI 0.070 . TA18005 686 ACKDILK|NM 0.053 . TA18005 689 DILKNMK|YY 0.075 . TA18005 694 MKYYPDK|LP 0.064 . TA18005 714 CDVNGQR|NV 0.079 . TA18005 722 VVYNYLK|DK 0.073 . TA18005 724 YNYLKDK|SD 0.074 . TA18005 728 KDKSDVK|LV 0.077 . TA18005 733 VKLVELK|GN 0.066 . TA18005 762 VLSHSSK|SS 0.103 . TA18005 766 SSKSSFK|FN 0.078 . ____________________________^_________________

  • Fasta :-

    >TA18005 ATGCAAAATAAAATTAGAAACACCAGACTTGAAAACAATGGGATTGTAATGTTTACACTA GACGTCAGTACGGAAGTCGAAGAATACAAATTTGAAATACTAAGACAGTCTCCTCATGGA ATTCCAACATATACATACCTACCCTTTAAGAATTTCAAAATAGTAAGTGTAGTTGAAAAA TCTATTCCCATTTGGAGTCCAAAAGTCCAAGGAGAAGTATGTACGAAAGTTACAGTATGC ACAAGAGATGGACCAATTTTGGTTCATATCATAATAGAGTCACCAGAAGGGAAAGAGGCG TCGATATATTATGTAAAGGAGAAAAAATCCTGGAGAGAAGTTACGTTGAATACATTTTAT TCACTGTTTAACCATTTGGCCCTGAACAAGTCCGTGTTGGAGTACGTTACACTAAATATC GGTTCAGTGATAGATAGAACACATTTCTCACTAAATTCAACACCAGATAAACCATTTAAA ATTATCGTACCATACCCAGGATATGTACTAAGCAGAGTGTTCGACGGAATTAATACGATC TGGAAAAGTAGATTCTGTGATGACCACTGCACATATGTTAATATATTTTATAATAATAAG AAGCCGATATTGATACACTTAGCAATTTCTAAAAGACGCTCTGAAGAAAGATTGTTTTTC AAAAAGGTTTTAATGTCCTGGAAACAAATAAGTAAAGATGAATACATTGAGTCCCTAAAC GAATTGGGCTTTGATTTAACAGTATTCAATAACCATGTAACATTCGACTTTTCGGATCCG GACAAGTATAAATTTGTAGTACAGAGAACATATAATATGGATATAATGTCAGAAATCTTC TCGCCACTGCCAGGATACAGCGTTAAGAGAGTAGTAGATGACGAAAGAATAATATGGGAA AGCAATACAATGGACCAGTGTATATTTGCAAGGTTTTATTCAAGGAACAAAATAGCATTA CTTTGTCATTTATTGGTAACAGACTCTAAAGAGAACAAAATATTGTATTTTATGAAAGAT GGAGAAAACTGGTCATTGGTGGATAAGAGGACGTTCTATTACTTTTTATCTAATAAAGAT GACCCAATATATACACACAGAGGAATCGGAGTGGACAAAAAAGGTGACCGAAAGCTTTTG ATGAGCCACTTTAGAAATAAACAAGGCTTGTTAATTAGAACATACTGCTGTAAAGTAGAT AACCCTAAGGGAAACATAATATTAATTCACGGCTCCTGTGGACATTTTAAATCTCAGTTC TGCAGTTATGATATGGATTGGCACTACGAACGTTTCGGTTACCCAATACTGCCGTACATG AAGGATTTTACAAACATTAAGATGGACTCATTTTATAAGGACCTGAATTTTGATAATAAA ACATGTGAAGTGTACAAAGATGTGTTCGGATGGTCAAAGTTGGATGGAATAGATGCATTT GAGATTTCACCAAGATTTCAATATAACGGAACTTTTCTAGAGTCTTTGAATAACATGGGA TTTAACGTTTATGGAATGGACTCACAATCACATGGGCTGTCAGAATCAGTGCCAGACTCT AAGTTCTATATAAACGAATTCAAGGACTATGTTAACGATGTGTTGCAGTTTGTAGATATT GTGAAGAGAGGAAACTTTGAGAGCACAAAGGAAGAGTGGAACGAAGATTTCGTGTACAGT GTGAGCTCAGATAACGTGGATCTTAAATGTTACCTGTCAGGATTCTCGCTGGGAGGAAAT ATTGCAATACTTGCAGTACAAGAATTCCATAAAAACGCAAAACCAGGAGTAAGATTTGTA GACGGGTTGTTTATATTATCGGGAGTCCTAAACATCGACAACAATCTTGATACGTTCGCA AAGAAATTTACAATAGCATTGATAAAATTCACGTCCCTGATGACACCAAGAACACAACAA AACCCGTTGGAAAATAGTTTCTTATTCTCGGACTCATTTGAAATGTTTTCAAGATACAAG GATCCAACATTTTACAACGACCGCTTGTTCTATAAGACTGTAGAGCTTCTATTTGGAGCC TGTAAAGATATTTTAAAAAATATGAAGTATTACCCAGATAAATTACCAACGTTATTCATA CACGTCTCAGACGATCCAATGTGCGATGTCAACGGGCAAAGAAATGTAGTGTACAATTAC TTGAAGGATAAAAGTGACGTTAAACTAGTAGAATTAAAGGGGAATACACATCACCTAGTC CTTTCGCACATCTTCCCGAATGTGATGCCGATCATTAACGACTGGGTTTTGTCACATTCT AGCAAATCGTCCTTTAAATTTAATTGA
  • Download Fasta

  • Fasta :-

    MQNKIRNTRLENNGIVMFTLDVSTEVEEYKFEILRQSPHGIPTYTYLPFKNFKIVSVVEK SIPIWSPKVQGEVCTKVTVCTRDGPILVHIIIESPEGKEASIYYVKEKKSWREVTLNTFY SLFNHLALNKSVLEYVTLNIGSVIDRTHFSLNSTPDKPFKIIVPYPGYVLSRVFDGINTI WKSRFCDDHCTYVNIFYNNKKPILIHLAISKRRSEERLFFKKVLMSWKQISKDEYIESLN ELGFDLTVFNNHVTFDFSDPDKYKFVVQRTYNMDIMSEIFSPLPGYSVKRVVDDERIIWE SNTMDQCIFARFYSRNKIALLCHLLVTDSKENKILYFMKDGENWSLVDKRTFYYFLSNKD DPIYTHRGIGVDKKGDRKLLMSHFRNKQGLLIRTYCCKVDNPKGNIILIHGSCGHFKSQF CSYDMDWHYERFGYPILPYMKDFTNIKMDSFYKDLNFDNKTCEVYKDVFGWSKLDGIDAF EISPRFQYNGTFLESLNNMGFNVYGMDSQSHGLSESVPDSKFYINEFKDYVNDVLQFVDI VKRGNFESTKEEWNEDFVYSVSSDNVDLKCYLSGFSLGGNIAILAVQEFHKNAKPGVRFV DGLFILSGVLNIDNNLDTFAKKFTIALIKFTSLMTPRTQQNPLENSFLFSDSFEMFSRYK DPTFYNDRLFYKTVELLFGACKDILKNMKYYPDKLPTLFIHVSDDPMCDVNGQRNVVYNY LKDKSDVKLVELKGNTHHLVLSHIFPNVMPIINDWVLSHSSKSSFKFN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA18005210 SHLAISKRRS0.995unspTA18005210 SHLAISKRRS0.995unspTA18005210 SHLAISKRRS0.995unspTA18005214 SSKRRSEERL0.998unspTA18005226 SKVLMSWKQI0.992unspTA1800537 SILRQSPHGI0.991unspTA18005110 SKEKKSWREV0.996unsp

TA18005      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India