TA18145 | hypothetical protein

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No Results
No Results

  • Fasta :-

    >TA18145 MNVDLYSIVTGTHLTDSNKCSEISNYLLQLLSKDYTEISSTYDKLLNDDESLRNSLHSFV LKSAPIALNNINYTNNSLYHVGNLSKIAFDIKSSNLLSHKSTELEESLTRIVEELTEINS EYPDYKYLNSLLNFLNNFELNDTNLSFLLSINKVLNSNDSIQSELGLYLSNKVRNLLVSV EFELFTSFSNDFDENTKIIELIKKIGLSSVHEISVGFLMNRFDYLNNSFNSCVLKSNVNI QRNVFGDIDVNLSTFVNRVFQEFFDTIIKINSQDKLELDLNLSQLDEELINLSKLLSPLG LSFHHITNFTLTNIINI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA18145.fa Sequence name : TA18145 Sequence length : 317 VALUES OF COMPUTED PARAMETERS Coef20 : 3.724 CoefTot : -0.134 ChDiff : -17 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.065 0.859 -0.125 0.462 MesoH : -0.900 0.270 -0.504 0.175 MuHd_075 : 9.256 12.246 3.247 2.641 MuHd_095 : 4.487 3.589 1.972 0.503 MuHd_100 : 4.222 4.068 2.124 0.852 MuHd_105 : 6.914 5.179 2.118 1.425 Hmax_075 : 16.333 14.350 2.260 4.480 Hmax_095 : 4.600 6.700 -0.736 2.390 Hmax_100 : 5.100 9.500 -0.018 3.240 Hmax_105 : 9.500 9.500 0.297 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9549 0.0451 DFMC : 0.8859 0.1141
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 317 TA18145 MNVDLYSIVTGTHLTDSNKCSEISNYLLQLLSKDYTEISSTYDKLLNDDESLRNSLHSFVLKSAPIALNNINYTNNSLYH 80 VGNLSKIAFDIKSSNLLSHKSTELEESLTRIVEELTEINSEYPDYKYLNSLLNFLNNFELNDTNLSFLLSINKVLNSNDS 160 IQSELGLYLSNKVRNLLVSVEFELFTSFSNDFDENTKIIELIKKIGLSSVHEISVGFLMNRFDYLNNSFNSCVLKSNVNI 240 QRNVFGDIDVNLSTFVNRVFQEFFDTIIKINSQDKLELDLNLSQLDEELINLSKLLSPLGLSFHHITNFTLTNIINI 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA18145 19 HLTDSNK|CS 0.065 . TA18145 33 LLQLLSK|DY 0.070 . TA18145 44 ISSTYDK|LL 0.069 . TA18145 53 NDDESLR|NS 0.069 . TA18145 62 LHSFVLK|SA 0.127 . TA18145 86 HVGNLSK|IA 0.076 . TA18145 92 KIAFDIK|SS 0.068 . TA18145 100 SNLLSHK|ST 0.092 . TA18145 110 LEESLTR|IV 0.095 . TA18145 126 SEYPDYK|YL 0.074 . TA18145 153 FLLSINK|VL 0.053 . TA18145 172 GLYLSNK|VR 0.057 . TA18145 174 YLSNKVR|NL 0.102 . TA18145 197 DFDENTK|II 0.059 . TA18145 203 KIIELIK|KI 0.066 . TA18145 204 IIELIKK|IG 0.079 . TA18145 221 VGFLMNR|FD 0.071 . TA18145 235 FNSCVLK|SN 0.102 . TA18145 242 SNVNIQR|NV 0.135 . TA18145 258 LSTFVNR|VF 0.097 . TA18145 269 FFDTIIK|IN 0.055 . TA18145 275 KINSQDK|LE 0.058 . TA18145 294 ELINLSK|LL 0.064 . ____________________________^_________________

  • Fasta :-

    >TA18145 ATGAATGTTGATTTGTATTCTATAGTTACTGGTACTCATTTAACAGATTCTAACAAGTGT AGTGAAATTTCCAATTACCTTCTACAATTATTATCCAAAGATTATACTGAAATTTCATCT ACATATGATAAATTATTAAATGATGATGAATCACTACGGAATAGTTTACACAGTTTCGTT CTAAAATCTGCTCCTATCGCTTTAAATAATATTAATTATACCAACAATTCATTATATCAT GTTGGGAATTTATCAAAAATTGCTTTTGATATTAAATCTTCTAATTTATTATCACATAAA TCTACGGAGTTGGAAGAATCATTAACTAGAATTGTTGAAGAATTAACAGAGATTAATTCG GAATATCCTGATTACAAATATTTAAATTCATTATTAAACTTTTTAAACAATTTTGAATTG AATGATACAAATTTGTCATTTTTACTATCAATCAATAAGGTTCTAAACTCTAATGATTCT ATTCAAAGTGAATTAGGTTTATATCTATCAAACAAAGTTAGAAACTTGTTAGTTTCAGTG GAATTTGAGTTATTTACATCATTTAGTAATGATTTTGATGAGAATACTAAGATAATAGAA CTTATTAAGAAAATTGGTTTATCAAGTGTTCATGAAATATCTGTTGGTTTTCTTATGAAT AGATTTGATTATTTGAATAATTCCTTCAATTCCTGTGTACTCAAATCAAATGTTAATATT CAAAGAAATGTGTTTGGTGATATTGATGTAAATTTATCAACATTTGTGAACAGAGTATTT CAAGAGTTTTTTGATACAATAATAAAAATAAATTCACAAGATAAATTGGAACTGGATTTA AATTTATCACAACTTGATGAAGAATTAATAAATTTATCAAAATTATTATCACCATTAGGA TTATCATTTCATCATATTACTAATTTTACATTAACCAATATTATTAATATATAA
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  • Fasta :-

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA1814517 SHLTDSNKCS0.992unspTA1814598 SSNLLSHKST0.994unsp

TA18145      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India