TA19130 | mitochondrial processing peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA19130OTHER0.7705250.0004110.229064
No Results

  • Fasta :-

    >TA19130 MGVFSKIGRVSPDLSTLIVSKCARRTLFTNRYNHSPNPKFNLTLKRNSTTSLATDLFKDS KLHPNALNQPPCHVSTLKNGLRVATVWMPGSSSTVGVWIDSGSRFETPETNGSAHFLEHM IFKGTKSRSRQQLEEQIEHKGAHLNAYTSREQTAYYARCFNNDIPWCTELLSDILQNSQI DPDHMENEKHVILREMEEVEKSHDEVIFDRLHMTAFRDCSLGFTILGPVENIKNMQREYL LDYINHNYTADRMVLCAVGNFDHDKFVTLAEKHFSTIPKPVTKVELEKPYFVGSELLNRN DEMGPYAHMAVAFEGVPWNSPDSVAFMLMQSIIGTYNKSNEGVVPGKVSGNKTIHAVANR MTVGCAEFFSAFNTFYKDTGLFGFYAKCDEVAVDHCVGELLFGITSLSYSVTDEEVERAK RQLMLQFLSMTESTSSVAEEVARQVLVYGRRMPVAEFLLRLEKIDAEEVKRVAWKYLHDS HYNLYKFTIEIAVTAMGPLHGMPSLIDLRQKTYWLRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA19130.fa Sequence name : TA19130 Sequence length : 517 VALUES OF COMPUTED PARAMETERS Coef20 : 4.239 CoefTot : -0.542 ChDiff : -6 ZoneTo : 54 KR : 9 DE : 1 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.665 1.359 0.205 0.536 MesoH : -0.192 0.347 -0.308 0.245 MuHd_075 : 37.001 30.770 11.398 10.379 MuHd_095 : 48.307 28.237 12.809 9.740 MuHd_100 : 36.406 27.684 10.439 8.899 MuHd_105 : 38.678 28.999 9.589 9.149 Hmax_075 : 19.367 24.383 5.503 7.607 Hmax_095 : 13.563 19.400 4.878 5.276 Hmax_100 : 13.200 24.200 4.391 7.120 Hmax_105 : 20.533 27.183 4.767 8.167 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0136 0.9864 DFMC : 0.0304 0.9696 This protein is probably imported in mitochondria. f(Ser) = 0.1296 f(Arg) = 0.0926 CMi = 0.64935 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 517 TA19130 MGVFSKIGRVSPDLSTLIVSKCARRTLFTNRYNHSPNPKFNLTLKRNSTTSLATDLFKDSKLHPNALNQPPCHVSTLKNG 80 LRVATVWMPGSSSTVGVWIDSGSRFETPETNGSAHFLEHMIFKGTKSRSRQQLEEQIEHKGAHLNAYTSREQTAYYARCF 160 NNDIPWCTELLSDILQNSQIDPDHMENEKHVILREMEEVEKSHDEVIFDRLHMTAFRDCSLGFTILGPVENIKNMQREYL 240 LDYINHNYTADRMVLCAVGNFDHDKFVTLAEKHFSTIPKPVTKVELEKPYFVGSELLNRNDEMGPYAHMAVAFEGVPWNS 320 PDSVAFMLMQSIIGTYNKSNEGVVPGKVSGNKTIHAVANRMTVGCAEFFSAFNTFYKDTGLFGFYAKCDEVAVDHCVGEL 400 LFGITSLSYSVTDEEVERAKRQLMLQFLSMTESTSSVAEEVARQVLVYGRRMPVAEFLLRLEKIDAEEVKRVAWKYLHDS 480 HYNLYKFTIEIAVTAMGPLHGMPSLIDLRQKTYWLRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA19130 6 -MGVFSK|IG 0.063 . TA19130 9 VFSKIGR|VS 0.079 . TA19130 21 STLIVSK|CA 0.071 . TA19130 24 IVSKCAR|RT 0.084 . TA19130 25 VSKCARR|TL 0.135 . TA19130 31 RTLFTNR|YN 0.086 . TA19130 39 NHSPNPK|FN 0.073 . TA19130 45 KFNLTLK|RN 0.061 . TA19130 46 FNLTLKR|NS 0.192 . TA19130 58 LATDLFK|DS 0.063 . TA19130 61 DLFKDSK|LH 0.061 . TA19130 78 CHVSTLK|NG 0.056 . TA19130 82 TLKNGLR|VA 0.101 . TA19130 104 WIDSGSR|FE 0.073 . TA19130 123 LEHMIFK|GT 0.070 . TA19130 126 MIFKGTK|SR 0.090 . TA19130 128 FKGTKSR|SR 0.160 . TA19130 130 GTKSRSR|QQ 0.080 . TA19130 140 EEQIEHK|GA 0.075 . TA19130 150 LNAYTSR|EQ 0.098 . TA19130 158 QTAYYAR|CF 0.094 . TA19130 189 DHMENEK|HV 0.070 . TA19130 194 EKHVILR|EM 0.157 . TA19130 201 EMEEVEK|SH 0.075 . TA19130 210 DEVIFDR|LH 0.088 . TA19130 217 LHMTAFR|DC 0.129 . TA19130 233 GPVENIK|NM 0.059 . TA19130 237 NIKNMQR|EY 0.066 . TA19130 252 HNYTADR|MV 0.136 . TA19130 265 GNFDHDK|FV 0.129 . TA19130 272 FVTLAEK|HF 0.063 . TA19130 279 HFSTIPK|PV 0.133 . TA19130 283 IPKPVTK|VE 0.059 . TA19130 288 TKVELEK|PY 0.067 . TA19130 299 GSELLNR|ND 0.089 . TA19130 338 IIGTYNK|SN 0.102 . TA19130 347 EGVVPGK|VS 0.069 . TA19130 352 GKVSGNK|TI 0.071 . TA19130 360 IHAVANR|MT 0.096 . TA19130 377 AFNTFYK|DT 0.089 . TA19130 387 LFGFYAK|CD 0.074 . TA19130 418 TDEEVER|AK 0.097 . TA19130 420 EEVERAK|RQ 0.055 . TA19130 421 EVERAKR|QL 0.494 . TA19130 443 VAEEVAR|QV 0.124 . TA19130 450 QVLVYGR|RM 0.074 . TA19130 451 VLVYGRR|MP 0.099 . TA19130 460 VAEFLLR|LE 0.063 . TA19130 463 FLLRLEK|ID 0.086 . TA19130 470 IDAEEVK|RV 0.076 . TA19130 471 DAEEVKR|VA 0.228 . TA19130 475 VKRVAWK|YL 0.091 . TA19130 486 SHYNLYK|FT 0.086 . TA19130 509 PSLIDLR|QK 0.070 . TA19130 511 LIDLRQK|TY 0.057 . TA19130 516 QKTYWLR|Y- 0.090 . ____________________________^_________________

  • Fasta :-

    >TA19130 ATGGGTGTATTTAGTAAAATAGGAAGGGTCTCCCCTGATCTTTCAACACTTATTGTTAGT AAATGTGCCAGGAGAACATTGTTTACGAATCGTTATAATCATTCGCCCAATCCAAAGTTT AATCTAACTCTTAAAAGGAACTCCACAACTTCTTTGGCAACTGACCTTTTTAAGGATTCC AAATTACATCCTAACGCACTGAACCAACCCCCCTGCCATGTTTCCACCCTTAAAAATGGG CTTAGAGTTGCGACTGTTTGGATGCCAGGCTCCTCATCTACAGTTGGAGTTTGGATAGAT AGCGGAAGCCGATTTGAAACGCCAGAGACTAACGGTTCTGCACATTTTCTTGAACATATG ATTTTTAAAGGAACAAAGTCACGTTCAAGGCAGCAATTGGAGGAACAAATTGAACATAAA GGAGCACATTTAAACGCATATACTTCAAGAGAACAAACAGCCTACTATGCAAGATGTTTT AATAACGACATCCCTTGGTGTACCGAGCTTCTCAGCGATATTCTGCAAAACAGCCAAATT GACCCGGACCACATGGAAAACGAAAAGCATGTTATTCTTCGAGAAATGGAAGAAGTAGAA AAGTCACACGACGAGGTCATCTTTGACCGATTACACATGACGGCCTTTCGAGATTGTTCA CTGGGATTCACTATACTGGGACCCGTTGAAAATATAAAGAATATGCAACGTGAGTATCTC TTGGACTACATCAACCACAATTACACAGCCGATAGGATGGTTCTTTGCGCCGTTGGCAAT TTTGATCATGATAAGTTCGTAACATTAGCTGAAAAACACTTTTCAACAATACCTAAACCG GTGACCAAGGTCGAGTTAGAGAAGCCTTATTTTGTTGGGTCTGAATTATTAAACAGAAAC GACGAGATGGGCCCATATGCCCATATGGCCGTTGCATTCGAGGGTGTACCATGGAATTCA CCCGATTCTGTAGCTTTCATGTTAATGCAAAGCATTATTGGCACCTACAATAAATCCAAT GAAGGTGTAGTTCCAGGAAAGGTGTCTGGAAATAAGACAATTCATGCAGTGGCGAACAGG ATGACAGTTGGTTGCGCGGAGTTCTTCAGCGCATTTAATACTTTCTACAAGGATACTGGC CTCTTTGGGTTTTACGCCAAATGCGACGAAGTAGCAGTTGATCACTGCGTCGGAGAGTTA CTCTTCGGGATCACATCCCTTTCATACTCAGTAACCGATGAGGAAGTCGAGCGGGCTAAA AGGCAGTTAATGTTACAGTTTCTTTCAATGACAGAATCAACATCGAGTGTCGCTGAGGAG GTTGCTAGGCAAGTTCTTGTTTATGGAAGAAGAATGCCCGTGGCAGAATTTCTGCTCAGA CTTGAAAAAATCGACGCCGAAGAAGTTAAGAGAGTTGCATGGAAATACTTACACGATTCA CACTATAATCTATATAAGTTTACTATTGAGATTGCTGTAACCGCAATGGGACCATTGCAT GGAATGCCATCTTTAATTGATCTAAGGCAAAAAACTTATTGGCTTAGATATTAA
  • Download Fasta

  • Fasta :-

    MGVFSKIGRVSPDLSTLIVSKCARRTLFTNRYNHSPNPKFNLTLKRNSTTSLATDLFKDS KLHPNALNQPPCHVSTLKNGLRVATVWMPGSSSTVGVWIDSGSRFETPETNGSAHFLEHM IFKGTKSRSRQQLEEQIEHKGAHLNAYTSREQTAYYARCFNNDIPWCTELLSDILQNSQI DPDHMENEKHVILREMEEVEKSHDEVIFDRLHMTAFRDCSLGFTILGPVENIKNMQREYL LDYINHNYTADRMVLCAVGNFDHDKFVTLAEKHFSTIPKPVTKVELEKPYFVGSELLNRN DEMGPYAHMAVAFEGVPWNSPDSVAFMLMQSIIGTYNKSNEGVVPGKVSGNKTIHAVANR MTVGCAEFFSAFNTFYKDTGLFGFYAKCDEVAVDHCVGELLFGITSLSYSVTDEEVERAK RQLMLQFLSMTESTSSVAEEVARQVLVYGRRMPVAEFLLRLEKIDAEEVKRVAWKYLHDS HYNLYKFTIEIAVTAMGPLHGMPSLIDLRQKTYWLRY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA19130178 SILQNSQIDP0.994unspTA19130178 SILQNSQIDP0.994unspTA19130178 SILQNSQIDP0.994unspTA19130410 SSLSYSVTDE0.997unspTA19130436 SESTSSVAEE0.994unspTA1913011 SIGRVSPDLS0.992unspTA1913048 SLKRNSTTSL0.995unsp

TA19130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India