TA20200 | proteasome subunit alpha type 5-2, putative

UniProt_ID: Q4UHB7

Computed_GO_Component_IDs: GO:0005839 GO:0019773
Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex
Computed_GO_Function_IDs: GO:0004175 GO:0004298
Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity
Computed_GO_Process_IDs: GO:0051603 GO:0006511
Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TA20200	OTHER	0.998775	0.000452	0.000774

No Results

Fasta :-
>TA20200 MFATRSEYDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVATKEGVIFASERRSNSPLLE FVSLEKIMEIDDHIACAMSGLIADAKTLVDHARSECVNHTFVYNERMGIRSCVESIADLA LEFSDVFDTKKKKTMSRPFGVALLVGGIDSEGPVIWCVDPSGTIIKYKAAAIGSAQEGAE SILLQKYDENMEFSDAEVLVLEILRQVMEEKMSPKNVEMARIRVDDVKYREYDEESLEKL ISSLPELPENLGAE
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA20200.fa Sequence name : TA20200 Sequence length : 254 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.388 ChDiff : -16 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.071 1.341 0.101 0.608 MesoH : -0.694 0.427 -0.365 0.249 MuHd_075 : 26.724 13.942 5.959 6.417 MuHd_095 : 22.131 11.767 5.885 4.795 MuHd_100 : 16.141 11.021 4.015 3.911 MuHd_105 : 10.946 11.184 2.747 3.559 Hmax_075 : 3.063 2.500 -1.437 2.600 Hmax_095 : 11.800 5.700 0.856 3.450 Hmax_100 : 3.000 3.000 -1.467 2.890 Hmax_105 : -5.775 2.400 -3.727 1.000 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6446 0.3554 DFMC : 0.6845 0.3155

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 254 TA20200 MFATRSEYDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVATKEGVIFASERRSNSPLLEFVSLEKIMEIDDHIACAMSG 80 LIADAKTLVDHARSECVNHTFVYNERMGIRSCVESIADLALEFSDVFDTKKKKTMSRPFGVALLVGGIDSEGPVIWCVDP 160 SGTIIKYKAAAIGSAQEGAESILLQKYDENMEFSDAEVLVLEILRQVMEEKMSPKNVEMARIRVDDVKYREYDEESLEKL 240 ISSLPELPENLGAE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA20200 5 --MFATR|SE 0.115 . TA20200 10 TRSEYDR|GV 0.194 . TA20200 20 TFSPEGR|LF 0.104 . TA20200 32 YALGAMK|LG 0.064 . TA20200 43 AIAVATK|EG 0.057 . TA20200 52 VIFASER|RS 0.074 . TA20200 53 IFASERR|SN 0.258 . TA20200 66 EFVSLEK|IM 0.056 . TA20200 86 GLIADAK|TL 0.068 . TA20200 93 TLVDHAR|SE 0.166 . TA20200 106 TFVYNER|MG 0.078 . TA20200 110 NERMGIR|SC 0.131 . TA20200 130 SDVFDTK|KK 0.062 . TA20200 131 DVFDTKK|KK 0.085 . TA20200 132 VFDTKKK|KT 0.092 . TA20200 133 FDTKKKK|TM 0.095 . TA20200 137 KKKTMSR|PF 0.126 . TA20200 166 PSGTIIK|YK 0.077 . TA20200 168 GTIIKYK|AA 0.092 . TA20200 186 ESILLQK|YD 0.069 . TA20200 205 LVLEILR|QV 0.094 . TA20200 211 RQVMEEK|MS 0.067 . TA20200 215 EEKMSPK|NV 0.090 . TA20200 221 KNVEMAR|IR 0.081 . TA20200 223 VEMARIR|VD 0.082 . TA20200 228 IRVDDVK|YR 0.078 . TA20200 230 VDDVKYR|EY 0.094 . TA20200 239 DEESLEK|LI 0.059 . ____________________________^_________________

Fasta :-
>TA20200 ATGTTCGCAACAAGAAGCGAGTACGATAGAGGTGTTAATACTTTTTCGCCTGAAGGTCGC CTCTTTCAGGTGGAATATGCACTTGGAGCAATGAAACTTGGTAGTACAGCCATAGCAGTG GCGACAAAAGAAGGAGTTATTTTTGCCTCAGAGAGAAGGTCAAATTCTCCCCTGCTGGAG TTTGTTTCCCTGGAAAAAATCATGGAAATCGACGACCATATAGCCTGCGCCATGAGCGGC CTAATCGCAGACGCCAAGACACTTGTAGACCACGCCAGGTCCGAATGTGTTAACCATACA TTTGTATATAATGAACGTATGGGTATTAGATCTTGTGTTGAGTCCATTGCTGATCTTGCC TTAGAATTCTCAGATGTGTTTGATACTAAGAAGAAGAAGACCATGAGCAGACCCTTTGGA GTTGCGTTGTTGGTGGGTGGTATTGATTCCGAAGGACCAGTTATATGGTGTGTTGACCCC TCTGGGACCATAATTAAGTACAAAGCGGCCGCTATCGGCTCAGCTCAAGAAGGTGCTGAA TCAATTCTCTTGCAAAAATATGATGAAAATATGGAATTTTCAGATGCTGAGGTGCTTGTA CTTGAGATTCTACGACAAGTTATGGAAGAAAAAATGAGCCCAAAGAACGTGGAAATGGCG AGAATCAGAGTAGATGATGTTAAATATAGAGAATATGATGAAGAGTCATTGGAAAAGCTG ATTTCAAGTCTACCAGAACTGCCAGAAAACCTAGGTGCGGAGTAG
Download Fasta

Fasta :-

MFATRSEYDRGVNTFSPEGRLFQVEYALGAMKLGSTAIAVATKEGVIFASERRSNSPLLE FVSLEKIMEIDDHIACAMSGLIADAKTLVDHARSECVNHTFVYNERMGIRSCVESIADLA LEFSDVFDTKKKKTMSRPFGVALLVGGIDSEGPVIWCVDPSGTIIKYKAAAIGSAQEGAE SILLQKYDENMEFSDAEVLVLEILRQVMEEKMSPKNVEMARIRVDDVKYREYDEESLEKL ISSLPELPENLGAE

Proteasome subunits

title: active site
coordinates: S35,E51,R53,K66,S174

	ID	Site	Position	Gscore	Iscore
	TA20200	T	4	0.516	0.039

	ID	Site	Position	Gscore	Iscore
	TA20200	T	4	0.516	0.039

	ID	Site	Peptide	Score	Method
	TA20200	213 S	EEKMSPKNV	0.997	unsp

TA20200 | proteasome subunit alpha type 5-2, putative

ID's

UniProt_ID: Q4UHB7

GEO Functions

Computed_GO_Component_IDs: GO:0005839 GO:0019773

Computed_GO_Components: proteasome core complex proteasome core complex, alpha-subunit complex

Computed_GO_Function_IDs: GO:0004175 GO:0004298

Computed_GO_Functions: endopeptidase activity threonine-type endopeptidase activity

Computed_GO_Process_IDs: GO:0051603 GO:0006511

Computed_GO_Processes: proteolysis involved in cellular protein catabolic process ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Proteasome subunits

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TA20200

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India