TA20250 | hypothetical protein

_IDPredictionOTHERSPmTPCS_Position
TA20250OTHER0.9991520.0001660.000682
No Results

  • Fasta :-

    >TA20250 MLLKKKYKKLKKLDLEPKLKKPILFLLSTHNEDTKQLLKDLYQICKEFSIFRQNNSKNII INKKLNEICINNKNHLESEFICNKLGFGLYVITSSNKKRPNSIGFGRLYNQNILDCCQFN ILQYKSINKFNQSSSLPRYGACSSSSNYLLSYTNTTSLGYRLTKLRNGAPLRSYPTNYHF CNLLVHLFYFLPLIIVQGSGFGQQNGHLITVRNILLDIFKGPNYPKISLDNIKQLITITI LDQYDTMGKGATGTPGKGANSMGMECTMGKGANFTLMECTSEKNLNEIAAVTNSGESSTF SNTGVNTSGVVNSKDIEASEGTGTVGASTVTEKLERRKLYKNGPIILFRRYSIKLLKSNK SNNSNEILPKVDLIEIGPSIDLQLEEVLNADPEIYKNSIQTQKRPKKLIAGINTNGPIIT TDELCEISTILDSKENSLLNFNGNSVTVLATAAPISLAPKGLLYSIKLAPFPGDTYTLSE SGYNGEILGYGNVSELGDFNLPVMNSSNFYWVLQSALNRRNITCEHLSLNQLSLEMFQYN NSIAFICNIQEHWFSIRKLHNEWFILDSLKDGPIIIEYGSLYDYIKEILEKGIGVILLVI TNNGKFPEPEPYKYILQSNQFFLKLSEITNIDSFNNNKKFIWPTTGGIRLDQYQSNEEYI GNDAIRIAIKLFTNERLTNSFSPNNTINKLFEWIEKKCNLKEYDYYFLIQTIPYRKFIKY INGSIELLTNSNEPNDVTNKTFQQLNFNTNDMFLLRIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA20250.fa Sequence name : TA20250 Sequence length : 758 VALUES OF COMPUTED PARAMETERS Coef20 : 3.329 CoefTot : -0.460 ChDiff : 14 ZoneTo : 13 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.753 2.218 0.269 0.799 MesoH : -0.019 0.445 -0.263 0.311 MuHd_075 : 13.148 5.529 3.141 2.774 MuHd_095 : 17.059 12.148 6.068 4.463 MuHd_100 : 21.823 13.108 7.712 5.374 MuHd_105 : 25.561 14.291 8.963 5.974 Hmax_075 : -10.100 0.700 -4.960 0.680 Hmax_095 : -12.950 2.012 -5.472 0.543 Hmax_100 : -6.600 6.200 -3.258 2.120 Hmax_105 : -1.517 5.833 -1.483 3.243 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9605 0.0395 DFMC : 0.9619 0.0381
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 758 TA20250 MLLKKKYKKLKKLDLEPKLKKPILFLLSTHNEDTKQLLKDLYQICKEFSIFRQNNSKNIIINKKLNEICINNKNHLESEF 80 ICNKLGFGLYVITSSNKKRPNSIGFGRLYNQNILDCCQFNILQYKSINKFNQSSSLPRYGACSSSSNYLLSYTNTTSLGY 160 RLTKLRNGAPLRSYPTNYHFCNLLVHLFYFLPLIIVQGSGFGQQNGHLITVRNILLDIFKGPNYPKISLDNIKQLITITI 240 LDQYDTMGKGATGTPGKGANSMGMECTMGKGANFTLMECTSEKNLNEIAAVTNSGESSTFSNTGVNTSGVVNSKDIEASE 320 GTGTVGASTVTEKLERRKLYKNGPIILFRRYSIKLLKSNKSNNSNEILPKVDLIEIGPSIDLQLEEVLNADPEIYKNSIQ 400 TQKRPKKLIAGINTNGPIITTDELCEISTILDSKENSLLNFNGNSVTVLATAAPISLAPKGLLYSIKLAPFPGDTYTLSE 480 SGYNGEILGYGNVSELGDFNLPVMNSSNFYWVLQSALNRRNITCEHLSLNQLSLEMFQYNNSIAFICNIQEHWFSIRKLH 560 NEWFILDSLKDGPIIIEYGSLYDYIKEILEKGIGVILLVITNNGKFPEPEPYKYILQSNQFFLKLSEITNIDSFNNNKKF 640 IWPTTGGIRLDQYQSNEEYIGNDAIRIAIKLFTNERLTNSFSPNNTINKLFEWIEKKCNLKEYDYYFLIQTIPYRKFIKY 720 INGSIELLTNSNEPNDVTNKTFQQLNFNTNDMFLLRIN 800 ................................................................................ 80 ..................P............................................................. 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ...................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TA20250 4 ---MLLK|KK 0.061 . TA20250 5 --MLLKK|KY 0.078 . TA20250 6 -MLLKKK|YK 0.082 . TA20250 8 LLKKKYK|KL 0.069 . TA20250 9 LKKKYKK|LK 0.079 . TA20250 11 KKYKKLK|KL 0.074 . TA20250 12 KYKKLKK|LD 0.067 . TA20250 18 KLDLEPK|LK 0.063 . TA20250 20 DLEPKLK|KP 0.058 . TA20250 21 LEPKLKK|PI 0.091 . TA20250 35 THNEDTK|QL 0.073 . TA20250 39 DTKQLLK|DL 0.069 . TA20250 46 DLYQICK|EF 0.062 . TA20250 52 KEFSIFR|QN 0.078 . TA20250 57 FRQNNSK|NI 0.068 . TA20250 63 KNIIINK|KL 0.063 . TA20250 64 NIIINKK|LN 0.098 . TA20250 73 EICINNK|NH 0.057 . TA20250 84 SEFICNK|LG 0.054 . TA20250 97 VITSSNK|KR 0.053 . TA20250 98 ITSSNKK|RP 0.089 . TA20250 99 TSSNKKR|PN 0.506 *ProP* TA20250 107 NSIGFGR|LY 0.096 . TA20250 125 FNILQYK|SI 0.094 . TA20250 129 QYKSINK|FN 0.058 . TA20250 138 QSSSLPR|YG 0.097 . TA20250 161 TTSLGYR|LT 0.083 . TA20250 164 LGYRLTK|LR 0.099 . TA20250 166 YRLTKLR|NG 0.079 . TA20250 172 RNGAPLR|SY 0.126 . TA20250 212 GHLITVR|NI 0.072 . TA20250 220 ILLDIFK|GP 0.056 . TA20250 226 KGPNYPK|IS 0.065 . TA20250 233 ISLDNIK|QL 0.066 . TA20250 249 QYDTMGK|GA 0.062 . TA20250 257 ATGTPGK|GA 0.076 . TA20250 270 MECTMGK|GA 0.071 . TA20250 283 MECTSEK|NL 0.064 . TA20250 314 SGVVNSK|DI 0.120 . TA20250 333 ASTVTEK|LE 0.059 . TA20250 336 VTEKLER|RK 0.064 . TA20250 337 TEKLERR|KL 0.153 . TA20250 338 EKLERRK|LY 0.072 . TA20250 341 ERRKLYK|NG 0.069 . TA20250 349 GPIILFR|RY 0.104 . TA20250 350 PIILFRR|YS 0.162 . TA20250 354 FRRYSIK|LL 0.068 . TA20250 357 YSIKLLK|SN 0.070 . TA20250 360 KLLKSNK|SN 0.083 . TA20250 370 SNEILPK|VD 0.060 . TA20250 396 ADPEIYK|NS 0.059 . TA20250 403 NSIQTQK|RP 0.059 . TA20250 404 SIQTQKR|PK 0.151 . TA20250 406 QTQKRPK|KL 0.086 . TA20250 407 TQKRPKK|LI 0.351 . TA20250 434 STILDSK|EN 0.061 . TA20250 460 PISLAPK|GL 0.069 . TA20250 467 GLLYSIK|LA 0.069 . TA20250 519 LQSALNR|RN 0.109 . TA20250 520 QSALNRR|NI 0.162 . TA20250 557 EHWFSIR|KL 0.094 . TA20250 558 HWFSIRK|LH 0.063 . TA20250 570 FILDSLK|DG 0.066 . TA20250 586 SLYDYIK|EI 0.067 . TA20250 591 IKEILEK|GI 0.088 . TA20250 605 VITNNGK|FP 0.061 . TA20250 613 PEPEPYK|YI 0.069 . TA20250 624 SNQFFLK|LS 0.068 . TA20250 638 DSFNNNK|KF 0.059 . TA20250 639 SFNNNKK|FI 0.167 . TA20250 649 PTTGGIR|LD 0.064 . TA20250 666 IGNDAIR|IA 0.139 . TA20250 670 AIRIAIK|LF 0.063 . TA20250 676 KLFTNER|LT 0.070 . TA20250 689 PNNTINK|LF 0.073 . TA20250 696 LFEWIEK|KC 0.059 . TA20250 697 FEWIEKK|CN 0.086 . TA20250 701 EKKCNLK|EY 0.061 . TA20250 715 IQTIPYR|KF 0.092 . TA20250 716 QTIPYRK|FI 0.089 . TA20250 719 PYRKFIK|YI 0.079 . TA20250 740 PNDVTNK|TF 0.060 . TA20250 756 NDMFLLR|IN 0.086 . ____________________________^_________________

  • Fasta :-

    >TA20250 ATGTTATTGAAAAAAAAGTATAAAAAATTAAAAAAATTGGATTTGGAACCGAAATTAAAG AAACCAATATTATTTTTATTATCAACACATAATGAAGATACAAAACAATTATTAAAAGAT TTATATCAAATTTGTAAAGAATTTTCAATATTTCGACAAAATAATTCTAAAAATATTATT ATAAATAAAAAATTGAATGAAATTTGTATAAATAATAAAAATCATTTAGAAAGTGAATTT ATATGTAATAAATTAGGATTTGGTTTATATGTAATAACAAGTTCTAATAAAAAAAGACCT AACAGTATTGGATTTGGACGTTTATATAATCAAAATATACTTGATTGTTGTCAATTCAAT ATATTACAATATAAATCTATTAATAAATTTAATCAATCAAGTTCGTTACCCCGTTACGGT GCTTGCTCCAGCAGCTCCAATTACCTACTTAGTTATACCAATACTACTTCTTTAGGGTAC CGTTTGACCAAGCTCCGTAACGGAGCTCCTTTACGGAGTTACCCCACTAACTATCATTTT TGCAACCTTTTAGTACATTTATTTTATTTTTTACCATTAATAATAGTACAAGGTTCAGGA TTTGGACAACAAAATGGACATTTAATTACTGTTCGTAATATACTTTTAGATATTTTCAAA GGTCCCAATTATCCTAAAATCTCACTTGATAATATTAAACAACTTATTACCATAACTATT CTTGATCAATATGATACTATGGGAAAGGGAGCTACAGGTACTCCAGGAAAGGGAGCTAAT TCTATGGGTATGGAGTGTACTATGGGAAAGGGAGCTAATTTTACCCTTATGGAGTGTACT AGTGAGAAAAATTTGAATGAAATTGCTGCTGTCACTAATTCTGGGGAGTCGAGTACTTTT TCTAATACTGGAGTTAATACTAGTGGAGTTGTTAATAGTAAGGATATTGAGGCTAGTGAG GGAACTGGTACCGTTGGAGCAAGCACCGTAACGGAGAAATTAGAAAGAAGAAAATTATAT AAAAATGGTCCAATTATATTATTTCGTAGATATTCAATAAAACTTTTAAAATCAAATAAA TCAAATAATTCAAATGAAATATTACCTAAAGTAGATTTGATTGAGATTGGACCAAGTATA GATTTACAATTAGAAGAAGTATTAAATGCTGATCCAGAAATATATAAAAATTCTATACAA ACACAAAAGAGACCAAAAAAATTAATTGCAGGAATAAATACAAATGGACCAATAATTACT ACTGATGAATTATGTGAAATTTCTACTATATTAGATTCTAAAGAAAATTCATTACTTAAT TTTAATGGTAACTCCGTTACGGTGCTTGCAACAGCAGCTCCGATATCACTAGCCCCGAAG GGGCTTCTATATAGCATAAAATTAGCTCCCTTTCCCGGGGATACTTATACCCTTAGTGAA AGTGGATATAATGGAGAAATATTAGGTTATGGTAATGTATCCGAATTAGGAGATTTCAAT CTTCCAGTAATGAATAGCAGCAATTTCTACTGGGTATTACAAAGTGCATTGAATAGACGT AATATAACATGTGAACATTTATCATTAAATCAATTAAGTCTTGAAATGTTCCAATATAAT AATTCTATTGCATTTATTTGTAATATACAAGAACATTGGTTTTCAATACGTAAATTACAT AATGAATGGTTTATATTGGATAGTTTAAAAGATGGTCCTATAATAATAGAATATGGTTCA TTATATGATTATATAAAAGAAATATTAGAGAAAGGAATTGGTGTAATATTATTAGTAATA ACAAATAATGGAAAATTTCCAGAACCTGAACCATATAAATATATATTACAATCCAATCAA TTTTTTTTAAAATTATCAGAAATTACAAATATTGATTCATTTAATAATAATAAAAAATTT ATTTGGCCTACTACTGGTGGTATAAGATTAGATCAATATCAATCCAATGAAGAATATATT GGTAATGATGCTATAAGAATAGCAATAAAATTATTTACAAATGAAAGATTAACTAATTCT TTTTCACCAAATAATACTATTAATAAATTATTTGAATGGATAGAGAAGAAATGTAATTTA AAAGAATATGATTATTATTTTTTAATACAAACAATACCATATCGTAAATTTATTAAATAT ATTAATGGTTCTATTGAATTATTAACCAATTCTAATGAACCTAATGATGTTACTAATAAA ACATTTCAACAATTAAATTTCAATACTAATGATATGTTCTTATTAAGAATTAATTAA
  • Download Fasta

  • Fasta :-

    MLLKKKYKKLKKLDLEPKLKKPILFLLSTHNEDTKQLLKDLYQICKEFSIFRQNNSKNII INKKLNEICINNKNHLESEFICNKLGFGLYVITSSNKKRPNSIGFGRLYNQNILDCCQFN ILQYKSINKFNQSSSLPRYGACSSSSNYLLSYTNTTSLGYRLTKLRNGAPLRSYPTNYHF CNLLVHLFYFLPLIIVQGSGFGQQNGHLITVRNILLDIFKGPNYPKISLDNIKQLITITI LDQYDTMGKGATGTPGKGANSMGMECTMGKGANFTLMECTSEKNLNEIAAVTNSGESSTF SNTGVNTSGVVNSKDIEASEGTGTVGASTVTEKLERRKLYKNGPIILFRRYSIKLLKSNK SNNSNEILPKVDLIEIGPSIDLQLEEVLNADPEIYKNSIQTQKRPKKLIAGINTNGPIIT TDELCEISTILDSKENSLLNFNGNSVTVLATAAPISLAPKGLLYSIKLAPFPGDTYTLSE SGYNGEILGYGNVSELGDFNLPVMNSSNFYWVLQSALNRRNITCEHLSLNQLSLEMFQYN NSIAFICNIQEHWFSIRKLHNEWFILDSLKDGPIIIEYGSLYDYIKEILEKGIGVILLVI TNNGKFPEPEPYKYILQSNQFFLKLSEITNIDSFNNNKKFIWPTTGGIRLDQYQSNEEYI GNDAIRIAIKLFTNERLTNSFSPNNTINKLFEWIEKKCNLKEYDYYFLIQTIPYRKFIKY INGSIELLTNSNEPNDVTNKTFQQLNFNTNDMFLLRIN

  • title: key conserved lysines
  • coordinates: K670,R715
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA20250102 SKRPNSIGFG0.996unspTA20250352 SFRRYSIKLL0.99unsp

TA20250      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India