TA20475 | endopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA20475OTHER0.7018770.0003750.297749
No Results

  • Fasta :-

    >TA20475 MLINYRILLSHHVSKNIQKHTFPKYFKNGKFVSYFSKFNYTYNEIFKLTENNTLKFNKSN YVTHCKEDDYGYFGLKVKNPLDLLKLTNDSINYSQSLVNNLVNFPGNKINKEQRDQKDYE NENNKVLEVIDDISNVLCSIADPCELLRHVHPDEEWRKMSNTCIELISEFIININVNENI YKLLIENLKENLTNEESFVLKHMIRSMEQQGVHLSKESKMKYKELITKEQMLAFSIVEGN TFKFQLGNLTDNDPLEKIPKDENIYNYLLKNSNQDGLRKSIWFSQRISNQSLYKKMKELH KIRTELSKLRGYDNYLNYIQQECILSNTNDVYEFLINCSKLLKPYLLNDLERLLQYKKLI HENKSEQEEDNLEQKLHPWDVEYLIKMSRNERNVNISLLSLITYFNILLNKLFKITIHPS ESKESIYDENVIKYNLIKDGKVISSLYLDLFERLNKHNISAQFTIRCSKKINTKNNNSLY ILNLIHENNFVNQGSYIKQLPSSIIVLSLHNDDKKSNVKEILKSTKIDIYNGEIIFHELG HIVHTLLSDTHYQHLSGTIIFYFIYNVLNEIVALLTTRNSRHTYLSYFTQTVDLDDIIYI DKNINEYDKGNLLINKGGLTVFGNEYKLFNSIDMSKVLLLSIIDQWFYGTEEDWYTIEKN INYDIIFKDFDMFNEKFNDYQIYQLLSPNCITNFDHLIHYGGNYYCYLYSKILSLKVFKK FNGLEFEQVGNRLLTFFQNGSIDSSINPINKLANTDLNKISDCCDVLLEVTRYLNFLNLL RFQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA20475.fa Sequence name : TA20475 Sequence length : 783 VALUES OF COMPUTED PARAMETERS Coef20 : 3.820 CoefTot : -2.559 ChDiff : -5 ZoneTo : 43 KR : 7 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.994 1.888 0.066 0.726 MesoH : -0.491 0.307 -0.412 0.260 MuHd_075 : 35.868 29.137 11.314 9.343 MuHd_095 : 34.940 20.137 12.701 6.764 MuHd_100 : 26.160 21.568 10.268 4.981 MuHd_105 : 39.099 22.704 12.983 7.917 Hmax_075 : 13.500 21.350 1.809 5.750 Hmax_095 : 7.087 3.850 -0.352 3.027 Hmax_100 : 11.500 15.500 1.041 3.210 Hmax_105 : 14.233 9.100 1.746 4.737 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0905 0.9095 DFMC : 0.1747 0.8253 This protein is probably imported in mitochondria. f(Ser) = 0.0930 f(Arg) = 0.0233 CMi = 0.90703 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 783 TA20475 MLINYRILLSHHVSKNIQKHTFPKYFKNGKFVSYFSKFNYTYNEIFKLTENNTLKFNKSNYVTHCKEDDYGYFGLKVKNP 80 LDLLKLTNDSINYSQSLVNNLVNFPGNKINKEQRDQKDYENENNKVLEVIDDISNVLCSIADPCELLRHVHPDEEWRKMS 160 NTCIELISEFIININVNENIYKLLIENLKENLTNEESFVLKHMIRSMEQQGVHLSKESKMKYKELITKEQMLAFSIVEGN 240 TFKFQLGNLTDNDPLEKIPKDENIYNYLLKNSNQDGLRKSIWFSQRISNQSLYKKMKELHKIRTELSKLRGYDNYLNYIQ 320 QECILSNTNDVYEFLINCSKLLKPYLLNDLERLLQYKKLIHENKSEQEEDNLEQKLHPWDVEYLIKMSRNERNVNISLLS 400 LITYFNILLNKLFKITIHPSESKESIYDENVIKYNLIKDGKVISSLYLDLFERLNKHNISAQFTIRCSKKINTKNNNSLY 480 ILNLIHENNFVNQGSYIKQLPSSIIVLSLHNDDKKSNVKEILKSTKIDIYNGEIIFHELGHIVHTLLSDTHYQHLSGTII 560 FYFIYNVLNEIVALLTTRNSRHTYLSYFTQTVDLDDIIYIDKNINEYDKGNLLINKGGLTVFGNEYKLFNSIDMSKVLLL 640 SIIDQWFYGTEEDWYTIEKNINYDIIFKDFDMFNEKFNDYQIYQLLSPNCITNFDHLIHYGGNYYCYLYSKILSLKVFKK 720 FNGLEFEQVGNRLLTFFQNGSIDSSINPINKLANTDLNKISDCCDVLLEVTRYLNFLNLLRFQ 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA20475 6 -MLINYR|IL 0.066 . TA20475 15 LSHHVSK|NI 0.081 . TA20475 19 VSKNIQK|HT 0.072 . TA20475 24 QKHTFPK|YF 0.087 . TA20475 27 TFPKYFK|NG 0.054 . TA20475 30 KYFKNGK|FV 0.076 . TA20475 37 FVSYFSK|FN 0.083 . TA20475 47 TYNEIFK|LT 0.067 . TA20475 55 TENNTLK|FN 0.072 . TA20475 58 NTLKFNK|SN 0.074 . TA20475 66 NYVTHCK|ED 0.067 . TA20475 76 YGYFGLK|VK 0.053 . TA20475 78 YFGLKVK|NP 0.058 . TA20475 85 NPLDLLK|LT 0.068 . TA20475 108 VNFPGNK|IN 0.062 . TA20475 111 PGNKINK|EQ 0.071 . TA20475 114 KINKEQR|DQ 0.160 . TA20475 117 KEQRDQK|DY 0.198 . TA20475 125 YENENNK|VL 0.068 . TA20475 148 DPCELLR|HV 0.135 . TA20475 157 HPDEEWR|KM 0.080 . TA20475 158 PDEEWRK|MS 0.086 . TA20475 182 VNENIYK|LL 0.065 . TA20475 189 LLIENLK|EN 0.061 . TA20475 201 EESFVLK|HM 0.076 . TA20475 205 VLKHMIR|SM 0.201 . TA20475 216 QGVHLSK|ES 0.071 . TA20475 219 HLSKESK|MK 0.086 . TA20475 221 SKESKMK|YK 0.087 . TA20475 223 ESKMKYK|EL 0.096 . TA20475 228 YKELITK|EQ 0.060 . TA20475 243 VEGNTFK|FQ 0.063 . TA20475 257 DNDPLEK|IP 0.053 . TA20475 260 PLEKIPK|DE 0.065 . TA20475 270 IYNYLLK|NS 0.065 . TA20475 278 SNQDGLR|KS 0.071 . TA20475 279 NQDGLRK|SI 0.121 . TA20475 286 SIWFSQR|IS 0.106 . TA20475 294 SNQSLYK|KM 0.059 . TA20475 295 NQSLYKK|MK 0.097 . TA20475 297 SLYKKMK|EL 0.099 . TA20475 301 KMKELHK|IR 0.054 . TA20475 303 KELHKIR|TE 0.083 . TA20475 308 IRTELSK|LR 0.062 . TA20475 310 TELSKLR|GY 0.113 . TA20475 340 FLINCSK|LL 0.058 . TA20475 343 NCSKLLK|PY 0.056 . TA20475 352 LLNDLER|LL 0.087 . TA20475 357 ERLLQYK|KL 0.070 . TA20475 358 RLLQYKK|LI 0.080 . TA20475 364 KLIHENK|SE 0.082 . TA20475 375 EDNLEQK|LH 0.057 . TA20475 386 DVEYLIK|MS 0.060 . TA20475 389 YLIKMSR|NE 0.074 . TA20475 392 KMSRNER|NV 0.475 . TA20475 411 FNILLNK|LF 0.056 . TA20475 414 LLNKLFK|IT 0.065 . TA20475 423 IHPSESK|ES 0.059 . TA20475 433 YDENVIK|YN 0.064 . TA20475 438 IKYNLIK|DG 0.065 . TA20475 441 NLIKDGK|VI 0.061 . TA20475 453 YLDLFER|LN 0.071 . TA20475 456 LFERLNK|HN 0.130 . TA20475 466 SAQFTIR|CS 0.094 . TA20475 469 FTIRCSK|KI 0.121 . TA20475 470 TIRCSKK|IN 0.141 . TA20475 474 SKKINTK|NN 0.059 . TA20475 498 NQGSYIK|QL 0.059 . TA20475 514 SLHNDDK|KS 0.070 . TA20475 515 LHNDDKK|SN 0.143 . TA20475 519 DKKSNVK|EI 0.061 . TA20475 523 NVKEILK|ST 0.066 . TA20475 526 EILKSTK|ID 0.062 . TA20475 578 VALLTTR|NS 0.069 . TA20475 581 LTTRNSR|HT 0.194 . TA20475 602 DIIYIDK|NI 0.060 . TA20475 609 NINEYDK|GN 0.064 . TA20475 616 GNLLINK|GG 0.063 . TA20475 627 VFGNEYK|LF 0.062 . TA20475 636 NSIDMSK|VL 0.056 . TA20475 659 DWYTIEK|NI 0.058 . TA20475 668 NYDIIFK|DF 0.062 . TA20475 676 FDMFNEK|FN 0.072 . TA20475 711 YCYLYSK|IL 0.061 . TA20475 716 SKILSLK|VF 0.059 . TA20475 719 LSLKVFK|KF 0.065 . TA20475 720 SLKVFKK|FN 0.184 . TA20475 732 FEQVGNR|LL 0.074 . TA20475 751 SINPINK|LA 0.072 . TA20475 759 ANTDLNK|IS 0.057 . TA20475 772 VLLEVTR|YL 0.075 . TA20475 781 NFLNLLR|FQ 0.073 . ____________________________^_________________

  • Fasta :-

    >TA20475 ATGCTTATAAATTATCGTATTTTGTTATCCCATCATGTTTCAAAAAATATCCAAAAACAC ACCTTTCCTAAATATTTCAAAAATGGAAAATTTGTATCATACTTCTCTAAATTTAATTAC ACCTATAACGAAATCTTCAAGTTAACTGAGAATAACACATTAAAGTTCAATAAATCAAAT TATGTTACACATTGCAAGGAGGATGATTATGGCTATTTCGGTTTAAAAGTTAAAAACCCT TTAGATTTGTTAAAGTTGACCAATGATTCCATTAATTATTCTCAATCACTAGTCAACAAC CTAGTAAATTTCCCCGGAAACAAAATTAACAAAGAACAACGAGATCAAAAAGACTACGAG AATGAGAATAATAAGGTTTTAGAGGTAATAGACGATATATCAAACGTCTTATGCTCAATA GCTGATCCCTGCGAATTATTAAGACATGTACATCCCGATGAAGAATGGCGTAAAATGTCA AATACGTGCATAGAATTGATTTCAGAGTTTATTATTAATATCAACGTTAACGAAAATATC TACAAGTTGTTGATAGAGAATTTAAAGGAGAATTTAACCAATGAAGAGAGTTTTGTACTA AAACATATGATCAGGTCCATGGAACAACAGGGAGTACATCTATCAAAAGAGTCTAAAATG AAATATAAGGAGTTGATTACAAAGGAACAGATGTTAGCATTTTCTATAGTAGAGGGCAAT ACCTTTAAATTTCAATTAGGAAATTTGACCGATAATGATCCACTAGAGAAAATACCCAAA GATGAAAATATATACAACTATTTACTTAAAAATTCTAATCAGGATGGTTTGAGGAAGTCA ATTTGGTTTTCACAAAGGATCAGTAATCAAAGTTTGTACAAAAAGATGAAAGAGTTGCAT AAAATTAGGACTGAATTATCAAAATTAAGAGGATATGATAACTACCTAAATTATATTCAG CAGGAGTGTATCTTGAGTAATACAAATGATGTGTACGAATTTTTAATCAACTGTTCAAAG CTATTGAAGCCCTATCTCCTTAATGATCTTGAACGATTATTACAATATAAGAAATTAATT CATGAAAACAAATCGGAACAAGAAGAGGATAATTTAGAACAAAAACTACACCCCTGGGAT GTGGAATATTTGATTAAGATGTCCAGAAATGAAAGAAATGTAAACATCTCACTGCTCTCA CTGATTACCTACTTTAACATTTTATTAAACAAATTGTTCAAAATTACCATTCACCCCTCT GAATCAAAAGAATCAATCTATGATGAGAATGTGATAAAGTATAATTTAATAAAGGATGGA AAGGTGATTTCAAGCTTATATTTGGATTTGTTCGAGAGGTTAAACAAGCATAACATCTCA GCCCAGTTTACAATCCGATGTTCAAAGAAAATTAACACAAAAAACAATAATAGTCTATAC ATTTTAAATTTGATACACGAAAATAACTTTGTTAACCAAGGATCTTATATTAAACAATTG CCTTCATCAATTATAGTACTATCATTACACAATGATGATAAGAAAAGTAACGTGAAAGAA ATATTGAAAAGTACAAAAATTGATATATATAACGGCGAAATTATATTCCATGAATTGGGA CATATTGTGCATACTCTTCTAAGTGATACACATTATCAACATTTGTCAGGTACAATTATA TTTTATTTTATCTACAATGTTCTCAATGAAATCGTGGCCCTATTGACTACGCGGAATTCT CGTCACACCTATTTGAGTTATTTTACTCAAACTGTAGATTTGGATGATATAATATATATC GACAAGAATATTAATGAATACGATAAGGGTAATTTGCTGATAAATAAGGGGGGATTAACA GTTTTTGGAAATGAATATAAGCTGTTTAACTCAATAGATATGTCAAAGGTTTTACTTTTG TCAATTATTGATCAGTGGTTTTATGGAACGGAAGAAGACTGGTACACTATTGAGAAAAAC ATTAATTATGACATTATTTTTAAAGATTTTGACATGTTCAATGAAAAATTCAATGATTAC CAGATCTATCAACTCTTGTCGCCGAATTGTATCACCAATTTTGATCACCTAATACACTAC GGAGGGAATTATTACTGTTATCTTTACTCAAAGATTCTATCACTAAAAGTGTTTAAGAAG TTTAATGGCTTAGAGTTTGAACAAGTTGGAAACCGTCTACTAACATTTTTCCAAAATGGC TCAATTGATTCCAGTATTAATCCAATTAATAAATTGGCGAATACTGATTTAAACAAGATC TCAGACTGTTGTGATGTATTATTAGAGGTGACCAGGTATCTTAATTTTCTAAATCTTTTA AGATTCCAGTAA
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  • Fasta :-

    MLINYRILLSHHVSKNIQKHTFPKYFKNGKFVSYFSKFNYTYNEIFKLTENNTLKFNKSN YVTHCKEDDYGYFGLKVKNPLDLLKLTNDSINYSQSLVNNLVNFPGNKINKEQRDQKDYE NENNKVLEVIDDISNVLCSIADPCELLRHVHPDEEWRKMSNTCIELISEFIININVNENI YKLLIENLKENLTNEESFVLKHMIRSMEQQGVHLSKESKMKYKELITKEQMLAFSIVEGN TFKFQLGNLTDNDPLEKIPKDENIYNYLLKNSNQDGLRKSIWFSQRISNQSLYKKMKELH KIRTELSKLRGYDNYLNYIQQECILSNTNDVYEFLINCSKLLKPYLLNDLERLLQYKKLI HENKSEQEEDNLEQKLHPWDVEYLIKMSRNERNVNISLLSLITYFNILLNKLFKITIHPS ESKESIYDENVIKYNLIKDGKVISSLYLDLFERLNKHNISAQFTIRCSKKINTKNNNSLY ILNLIHENNFVNQGSYIKQLPSSIIVLSLHNDDKKSNVKEILKSTKIDIYNGEIIFHELG HIVHTLLSDTHYQHLSGTIIFYFIYNVLNEIVALLTTRNSRHTYLSYFTQTVDLDDIIYI DKNINEYDKGNLLINKGGLTVFGNEYKLFNSIDMSKVLLLSIIDQWFYGTEEDWYTIEKN INYDIIFKDFDMFNEKFNDYQIYQLLSPNCITNFDHLIHYGGNYYCYLYSKILSLKVFKK FNGLEFEQVGNRLLTFFQNGSIDSSINPINKLANTDLNKISDCCDVLLEVTRYLNFLNLL RFQ

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA20475365 SHENKSEQEE0.994unspTA20475425 SESKESIYDE0.995unsp

TA20475      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India