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_IDPredictionOTHERSPmTPCS_Position
TA21055OTHER0.9999790.0000140.000007
No Results
  • Fasta :-

    >TA21055 MSTESVEAELNNNHESHLDENDLSNSDIVTKYRTASNVANTALKNVLAAVKPGVSVKSLC QIGDSTMLEETNKLYNKKENGRKVDKGVAFPTCVSVNELIDYFSPMDDSLTVKEGDVVKV TLGCHIDGYVGMVSHTMFVGESVKGRSADVLKAAWLCCEAALRKLKSGVSSHEVSKVIEK VASEFNCTPLIGFYSHELKRHVIEGVRYFSGSTKLEDKTEPITFGTKEAYSLNVVLTTGD HKPKTTELPTTVYRTDVQNRYTLKTSLGRSFMSQVNSKFPVFPFHLKSFEDERALKVGLQ ESLRHNLLKPYFVTSVKPGDVVAHFRFTVLLLPTGTKKISGLPFEQLEKCNSELSVKDQE LLTLLSVSYYYHIIVILLPYYNYIIAPVNPKKKKATKEEESS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA21055.fa Sequence name : TA21055 Sequence length : 402 VALUES OF COMPUTED PARAMETERS Coef20 : 2.944 CoefTot : 0.112 ChDiff : 2 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.518 1.853 0.224 0.698 MesoH : -0.380 0.471 -0.319 0.278 MuHd_075 : 10.552 8.725 3.629 1.827 MuHd_095 : 16.259 9.631 3.023 2.862 MuHd_100 : 12.441 4.580 3.184 1.553 MuHd_105 : 8.688 2.484 4.062 0.475 Hmax_075 : -2.100 2.800 -3.580 1.773 Hmax_095 : -0.700 0.350 -4.026 1.339 Hmax_100 : -3.600 1.200 -4.384 1.710 Hmax_105 : -0.700 -0.233 -3.407 0.922 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9846 0.0154 DFMC : 0.9812 0.0188
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 402 TA21055 MSTESVEAELNNNHESHLDENDLSNSDIVTKYRTASNVANTALKNVLAAVKPGVSVKSLCQIGDSTMLEETNKLYNKKEN 80 GRKVDKGVAFPTCVSVNELIDYFSPMDDSLTVKEGDVVKVTLGCHIDGYVGMVSHTMFVGESVKGRSADVLKAAWLCCEA 160 ALRKLKSGVSSHEVSKVIEKVASEFNCTPLIGFYSHELKRHVIEGVRYFSGSTKLEDKTEPITFGTKEAYSLNVVLTTGD 240 HKPKTTELPTTVYRTDVQNRYTLKTSLGRSFMSQVNSKFPVFPFHLKSFEDERALKVGLQESLRHNLLKPYFVTSVKPGD 320 VVAHFRFTVLLLPTGTKKISGLPFEQLEKCNSELSVKDQELLTLLSVSYYYHIIVILLPYYNYIIAPVNPKKKKATKEEE 400 SS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA21055 31 NSDIVTK|YR 0.068 . TA21055 33 DIVTKYR|TA 0.126 . TA21055 44 VANTALK|NV 0.074 . TA21055 51 NVLAAVK|PG 0.053 . TA21055 57 KPGVSVK|SL 0.163 . TA21055 73 MLEETNK|LY 0.069 . TA21055 77 TNKLYNK|KE 0.058 . TA21055 78 NKLYNKK|EN 0.115 . TA21055 82 NKKENGR|KV 0.164 . TA21055 83 KKENGRK|VD 0.069 . TA21055 86 NGRKVDK|GV 0.074 . TA21055 113 DDSLTVK|EG 0.069 . TA21055 119 KEGDVVK|VT 0.058 . TA21055 144 FVGESVK|GR 0.060 . TA21055 146 GESVKGR|SA 0.324 . TA21055 152 RSADVLK|AA 0.072 . TA21055 163 CCEAALR|KL 0.080 . TA21055 164 CEAALRK|LK 0.077 . TA21055 166 AALRKLK|SG 0.133 . TA21055 176 SSHEVSK|VI 0.083 . TA21055 180 VSKVIEK|VA 0.067 . TA21055 199 FYSHELK|RH 0.058 . TA21055 200 YSHELKR|HV 0.419 . TA21055 207 HVIEGVR|YF 0.084 . TA21055 214 YFSGSTK|LE 0.074 . TA21055 218 STKLEDK|TE 0.056 . TA21055 227 PITFGTK|EA 0.057 . TA21055 242 LTTGDHK|PK 0.065 . TA21055 244 TGDHKPK|TT 0.070 . TA21055 254 LPTTVYR|TD 0.088 . TA21055 260 RTDVQNR|YT 0.087 . TA21055 264 QNRYTLK|TS 0.061 . TA21055 269 LKTSLGR|SF 0.122 . TA21055 278 MSQVNSK|FP 0.062 . TA21055 287 VFPFHLK|SF 0.083 . TA21055 293 KSFEDER|AL 0.101 . TA21055 296 EDERALK|VG 0.080 . TA21055 304 GLQESLR|HN 0.073 . TA21055 309 LRHNLLK|PY 0.072 . TA21055 317 YFVTSVK|PG 0.060 . TA21055 326 DVVAHFR|FT 0.109 . TA21055 337 LLPTGTK|KI 0.061 . TA21055 338 LPTGTKK|IS 0.096 . TA21055 349 PFEQLEK|CN 0.053 . TA21055 357 NSELSVK|DQ 0.061 . TA21055 391 IAPVNPK|KK 0.058 . TA21055 392 APVNPKK|KK 0.117 . TA21055 393 PVNPKKK|KA 0.204 . TA21055 394 VNPKKKK|AT 0.172 . TA21055 397 KKKKATK|EE 0.073 . ____________________________^_________________
  • Fasta :-

    >TA21055 ATGTCGACTGAATCAGTTGAGGCCGAGCTTAACAATAATCACGAATCACATTTGGACGAA AATGATTTATCCAACTCCGACATTGTCACCAAATATCGCACTGCCTCAAATGTAGCTAAC ACTGCTTTAAAAAATGTACTAGCAGCCGTTAAGCCAGGAGTGTCTGTGAAATCTTTGTGC CAGATAGGAGATTCCACGATGCTGGAGGAGACCAACAAGTTGTACAATAAGAAGGAAAAC GGTAGAAAGGTTGATAAAGGCGTGGCATTCCCCACTTGTGTTTCAGTTAATGAGTTAATT GACTACTTTTCACCAATGGACGACTCGCTAACAGTCAAGGAGGGTGATGTTGTTAAAGTT ACTTTGGGGTGTCATATTGATGGTTATGTTGGAATGGTGTCGCATACCATGTTTGTGGGC GAATCAGTGAAGGGAAGGAGCGCAGATGTTCTTAAGGCGGCATGGTTGTGTTGTGAGGCA GCACTCCGGAAGCTTAAGAGCGGTGTTTCAAGCCATGAAGTGTCAAAGGTTATAGAAAAA GTAGCCTCTGAGTTTAACTGCACTCCCCTTATCGGTTTTTACAGCCATGAACTTAAGAGG CATGTGATAGAAGGAGTGAGGTACTTTTCAGGAAGCACTAAGCTCGAGGATAAGACTGAA CCCATAACATTTGGGACTAAGGAAGCATATTCTTTGAACGTAGTGTTAACTACAGGAGAC CATAAGCCTAAAACTACTGAACTACCCACTACTGTGTATAGAACTGACGTCCAGAACAGA TATACACTCAAAACCTCTCTGGGAAGGTCCTTTATGTCCCAAGTCAACTCCAAGTTCCCT GTGTTCCCCTTCCACCTCAAGTCCTTCGAGGACGAAAGGGCACTCAAGGTTGGCCTTCAG GAGTCACTCAGACACAACCTCCTAAAGCCATACTTTGTAACCTCAGTTAAACCAGGAGAT GTCGTGGCTCATTTCAGGTTCACAGTACTCTTACTTCCAACTGGAACCAAGAAAATTTCT GGACTTCCATTCGAACAACTCGAAAAGTGTAACTCAGAACTCTCTGTCAAAGATCAAGAA CTACTGACTCTACTCTCAGTATCTTATTACTACCATATTATTGTTATATTATTACCATAT TATAATTATATTATTGCTCCGGTGAATCCTAAGAAGAAAAAGGCAACAAAGGAGGAGGAA TCATCTTGA
  • Download Fasta
  • Fasta :-

    MSTESVEAELNNNHESHLDENDLSNSDIVTKYRTASNVANTALKNVLAAVKPGVSVKSLC QIGDSTMLEETNKLYNKKENGRKVDKGVAFPTCVSVNELIDYFSPMDDSLTVKEGDVVKV TLGCHIDGYVGMVSHTMFVGESVKGRSADVLKAAWLCCEAALRKLKSGVSSHEVSKVIEK VASEFNCTPLIGFYSHELKRHVIEGVRYFSGSTKLEDKTEPITFGTKEAYSLNVVLTTGD HKPKTTELPTTVYRTDVQNRYTLKTSLGRSFMSQVNSKFPVFPFHLKSFEDERALKVGLQ ESLRHNLLKPYFVTSVKPGDVVAHFRFTVLLLPTGTKKISGLPFEQLEKCNSELSVKDQE LLTLLSVSYYYHIIVILLPYYNYIIAPVNPKKKKATKEEESS

  • title: active site
  • coordinates: Y102,T121,M132,D240,K309,R326
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA21055S4020.5550.034TA21055S4010.5490.021
IDSitePositionGscoreIscoreIDSitePositionGscoreIscore
TA21055S4020.5550.034TA21055S4010.5490.021
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA21055288 SFHLKSFEDE0.995unspTA21055288 SFHLKSFEDE0.995unspTA21055288 SFHLKSFEDE0.995unspTA21055315 SYFVTSVKPG0.99unspTA21055355 SNSELSVKDQ0.998unspTA21055104 SIDYFSPMDD0.99unspTA21055171 SSGVSSHEVS0.993unsp

TA21055      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India