TA21265 | serine protease (zymogen-like), putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TA21265OTHER0.9763290.0001980.023474
No Results

  • Fasta :-

    >TA21265 MNVANSNLNPSPKLIKYSINHRSGFIQRKFNSSIAFSNFFQYSKFSGNNSLVKRVPFLNC FKRFDHTKTDEGVTGFPYLPNRIEELTHEQTLEGENIVLNPVVSPCAPYFTDSYSSIIKL YCDSTDPNYSQPWQMRKQIKSIGSAFVIKDKLILTNAHCVSWQNRCLVKKHGSTMKYPAR LIEIGHECDLAVLTVDDDSFWEGIEPFEFGDVPNLHDNVTVVGYPTGGDNLCITSGVVSR VDVTTYCHSNFRLLCVQIDAAINSGNSGGPAIKDGKVIGVAFQAYDEAQNIGYIIPTCII SQFLKQIELFKKYTGFVTIGITYQLLTNPYLKSYLSLNNLPQNVNPSGILVCQYDKSLNG IIQTNDVILQINGHDVADDGTVHFRGVERVHLAYSLKDKFCGDECELLILRDNNLKKIKI RLGKPNYLVPEHQWDIMPRYYIYGGLVFIPLSMEYLKDEFGKKFYERAPNALLKPLSDIF AKEKGEEVVVLSQILASDLTIGYDFKNIRLVSVNDVKVLNLKHLEQMLMEVTKDSKYVKF QFEQDILVVLETSKVPEFEHQILEQHAISSHKSRII
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA21265.fa Sequence name : TA21265 Sequence length : 576 VALUES OF COMPUTED PARAMETERS Coef20 : 3.668 CoefTot : -1.710 ChDiff : -3 ZoneTo : 64 KR : 10 DE : 0 CleavSite : 38 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.941 1.218 0.137 0.602 MesoH : -0.191 0.440 -0.221 0.290 MuHd_075 : 48.753 26.648 14.021 10.199 MuHd_095 : 32.527 25.807 11.294 7.187 MuHd_100 : 31.952 24.052 10.577 6.698 MuHd_105 : 30.734 19.910 9.216 6.286 Hmax_075 : 9.800 12.600 3.834 3.700 Hmax_095 : 8.400 12.250 0.606 3.185 Hmax_100 : 11.900 11.400 2.143 4.280 Hmax_105 : 8.838 9.363 0.345 3.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0465 0.9535 DFMC : 0.0297 0.9703 This protein is probably imported in mitochondria. f(Ser) = 0.1563 f(Arg) = 0.0625 CMi = 0.99206 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 576 TA21265 MNVANSNLNPSPKLIKYSINHRSGFIQRKFNSSIAFSNFFQYSKFSGNNSLVKRVPFLNCFKRFDHTKTDEGVTGFPYLP 80 NRIEELTHEQTLEGENIVLNPVVSPCAPYFTDSYSSIIKLYCDSTDPNYSQPWQMRKQIKSIGSAFVIKDKLILTNAHCV 160 SWQNRCLVKKHGSTMKYPARLIEIGHECDLAVLTVDDDSFWEGIEPFEFGDVPNLHDNVTVVGYPTGGDNLCITSGVVSR 240 VDVTTYCHSNFRLLCVQIDAAINSGNSGGPAIKDGKVIGVAFQAYDEAQNIGYIIPTCIISQFLKQIELFKKYTGFVTIG 320 ITYQLLTNPYLKSYLSLNNLPQNVNPSGILVCQYDKSLNGIIQTNDVILQINGHDVADDGTVHFRGVERVHLAYSLKDKF 400 CGDECELLILRDNNLKKIKIRLGKPNYLVPEHQWDIMPRYYIYGGLVFIPLSMEYLKDEFGKKFYERAPNALLKPLSDIF 480 AKEKGEEVVVLSQILASDLTIGYDFKNIRLVSVNDVKVLNLKHLEQMLMEVTKDSKYVKFQFEQDILVVLETSKVPEFEH 560 QILEQHAISSHKSRII 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA21265 13 NLNPSPK|LI 0.078 . TA21265 16 PSPKLIK|YS 0.067 . TA21265 22 KYSINHR|SG 0.141 . TA21265 28 RSGFIQR|KF 0.092 . TA21265 29 SGFIQRK|FN 0.112 . TA21265 44 NFFQYSK|FS 0.062 . TA21265 53 GNNSLVK|RV 0.065 . TA21265 54 NNSLVKR|VP 0.140 . TA21265 62 PFLNCFK|RF 0.055 . TA21265 63 FLNCFKR|FD 0.333 . TA21265 68 KRFDHTK|TD 0.082 . TA21265 82 FPYLPNR|IE 0.084 . TA21265 119 SYSSIIK|LY 0.066 . TA21265 136 SQPWQMR|KQ 0.121 . TA21265 137 QPWQMRK|QI 0.104 . TA21265 140 QMRKQIK|SI 0.156 . TA21265 149 GSAFVIK|DK 0.075 . TA21265 151 AFVIKDK|LI 0.064 . TA21265 165 CVSWQNR|CL 0.133 . TA21265 169 QNRCLVK|KH 0.068 . TA21265 170 NRCLVKK|HG 0.115 . TA21265 176 KHGSTMK|YP 0.066 . TA21265 180 TMKYPAR|LI 0.136 . TA21265 240 TSGVVSR|VD 0.089 . TA21265 252 YCHSNFR|LL 0.097 . TA21265 273 SGGPAIK|DG 0.071 . TA21265 276 PAIKDGK|VI 0.074 . TA21265 305 IISQFLK|QI 0.072 . TA21265 311 KQIELFK|KY 0.060 . TA21265 312 QIELFKK|YT 0.138 . TA21265 332 LTNPYLK|SY 0.068 . TA21265 356 LVCQYDK|SL 0.078 . TA21265 385 DGTVHFR|GV 0.165 . TA21265 389 HFRGVER|VH 0.067 . TA21265 397 HLAYSLK|DK 0.080 . TA21265 399 AYSLKDK|FC 0.095 . TA21265 411 CELLILR|DN 0.065 . TA21265 416 LRDNNLK|KI 0.061 . TA21265 417 RDNNLKK|IK 0.102 . TA21265 419 NNLKKIK|IR 0.060 . TA21265 421 LKKIKIR|LG 0.088 . TA21265 424 IKIRLGK|PN 0.135 . TA21265 439 QWDIMPR|YY 0.124 . TA21265 457 LSMEYLK|DE 0.072 . TA21265 462 LKDEFGK|KF 0.066 . TA21265 463 KDEFGKK|FY 0.129 . TA21265 467 GKKFYER|AP 0.102 . TA21265 474 APNALLK|PL 0.099 . TA21265 482 LSDIFAK|EK 0.077 . TA21265 484 DIFAKEK|GE 0.071 . TA21265 506 TIGYDFK|NI 0.063 . TA21265 509 YDFKNIR|LV 0.103 . TA21265 517 VSVNDVK|VL 0.056 . TA21265 522 VKVLNLK|HL 0.073 . TA21265 533 MLMEVTK|DS 0.087 . TA21265 536 EVTKDSK|YV 0.069 . TA21265 539 KDSKYVK|FQ 0.080 . TA21265 554 VVLETSK|VP 0.052 . TA21265 572 HAISSHK|SR 0.083 . TA21265 574 ISSHKSR|II 0.207 . ____________________________^_________________

  • Fasta :-

    >TA21265 ATGAATGTAGCAAACTCGAACCTGAATCCGTCACCAAAACTAATCAAATATTCCATAAAT CACCGAAGTGGATTTATCCAGAGGAAATTTAACTCCAGCATAGCATTTTCAAATTTTTTT CAATATTCCAAATTCTCAGGAAATAATTCTCTGGTTAAGAGAGTGCCATTTTTAAACTGT TTTAAGAGATTTGATCACACGAAAACAGATGAGGGAGTTACAGGGTTTCCCTATTTGCCA AATAGAATTGAGGAGTTGACCCATGAACAAACGCTGGAAGGCGAAAATATAGTGTTAAAT CCAGTTGTTAGTCCATGTGCTCCCTACTTCACTGACTCCTATTCCAGTATAATTAAACTG TACTGTGATTCCACAGACCCAAACTACTCTCAGCCCTGGCAAATGAGAAAACAAATCAAA AGCATAGGTTCCGCATTTGTTATAAAGGATAAATTAATTCTTACTAACGCACATTGTGTT TCCTGGCAAAATAGATGTTTGGTTAAAAAACACGGATCAACTATGAAATATCCAGCTCGT CTGATTGAGATAGGACATGAATGCGATTTGGCCGTTTTGACAGTTGATGATGACTCTTTT TGGGAAGGAATCGAGCCGTTTGAGTTTGGTGATGTGCCCAATTTACATGATAACGTCACT GTTGTCGGTTATCCCACTGGAGGTGACAACCTGTGTATAACTTCAGGAGTAGTCAGCCGT GTTGATGTTACTACATATTGTCACTCAAATTTCAGACTACTGTGTGTACAAATAGATGCT GCAATAAATTCAGGTAACTCGGGAGGTCCAGCAATCAAAGATGGAAAGGTTATTGGTGTG GCATTTCAGGCTTATGATGAAGCCCAAAACATAGGCTACATCATCCCAACCTGTATTATA AGCCAGTTCCTGAAACAAATTGAGCTTTTCAAAAAGTATACTGGCTTTGTAACAATCGGA ATTACATACCAACTATTAACCAATCCTTATCTTAAATCATATTTATCACTCAACAACTTA CCACAAAATGTGAATCCAAGTGGAATTTTGGTATGCCAATATGACAAATCATTAAATGGA ATAATACAAACAAATGATGTCATTTTGCAAATAAATGGACATGATGTTGCTGATGACGGA ACTGTACATTTCAGAGGAGTTGAAAGAGTACATTTGGCGTATTCATTGAAGGATAAATTC TGCGGAGACGAATGTGAGTTGTTAATCCTGAGAGATAATAATCTTAAGAAAATTAAAATA AGGCTTGGGAAACCTAATTACCTGGTCCCTGAACATCAGTGGGATATTATGCCCAGATAT TACATTTATGGTGGACTTGTATTCATACCATTATCAATGGAATATCTTAAGGATGAGTTT GGCAAAAAGTTTTATGAAAGAGCTCCAAATGCACTTTTAAAGCCATTGTCGGACATATTT GCAAAGGAGAAGGGTGAAGAGGTGGTTGTTTTGAGCCAGATTTTAGCCTCAGATCTCACA ATAGGTTATGACTTCAAGAACATAAGACTGGTTTCAGTGAACGACGTCAAGGTGCTGAAC CTGAAACACTTGGAACAAATGCTCATGGAAGTTACAAAGGACTCCAAATACGTCAAGTTC CAGTTCGAACAGGACATTCTAGTAGTTCTTGAAACCTCAAAAGTCCCGGAATTTGAGCAC CAAATTCTAGAGCAGCACGCCATTTCTTCACATAAATCAAGAATAATTTAA
  • Download Fasta

  • Fasta :-

    MNVANSNLNPSPKLIKYSINHRSGFIQRKFNSSIAFSNFFQYSKFSGNNSLVKRVPFLNC FKRFDHTKTDEGVTGFPYLPNRIEELTHEQTLEGENIVLNPVVSPCAPYFTDSYSSIIKL YCDSTDPNYSQPWQMRKQIKSIGSAFVIKDKLILTNAHCVSWQNRCLVKKHGSTMKYPAR LIEIGHECDLAVLTVDDDSFWEGIEPFEFGDVPNLHDNVTVVGYPTGGDNLCITSGVVSR VDVTTYCHSNFRLLCVQIDAAINSGNSGGPAIKDGKVIGVAFQAYDEAQNIGYIIPTCII SQFLKQIELFKKYTGFVTIGITYQLLTNPYLKSYLSLNNLPQNVNPSGILVCQYDKSLNG IIQTNDVILQINGHDVADDGTVHFRGVERVHLAYSLKDKFCGDECELLILRDNNLKKIKI RLGKPNYLVPEHQWDIMPRYYIYGGLVFIPLSMEYLKDEFGKKFYERAPNALLKPLSDIF AKEKGEEVVVLSQILASDLTIGYDFKNIRLVSVNDVKVLNLKHLEQMLMEVTKDSKYVKF QFEQDILVVLETSKVPEFEHQILEQHAISSHKSRII

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA2126511 SNLNPSPKLI0.991unspTA21265395 SHLAYSLKDK0.991unsp

TA21265      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India