TA21275 | ubiquitin carboxyl-terminal hydrolase (UBP14 homologue), putative

_IDPredictionOTHERSPmTPCS_Position
TA21275OTHER0.9997360.0001810.000083
No Results

  • Fasta :-

    >TA21275 MTELSLEFDRLCNELGLSVPDPNTVVHKTECLYSIDNEYSVNGIYVNLLTYQSFGKEMLK FDPIYPNCIYLNITKRLIPYKEEENEVNTNEESTHEEGVVFKEKKSYDESVEYKVYSPQL GSIALDQTFGQLLNICNSIIGHAGYEFKNNELSFSDILQVKDYTIESKHSKDLYQVENPK QINYENVKCEKCNSTTNLWLNLSDGYVGCGRKNYNSGGCQDGTEGAAILHYQETGSKYHL AVKIGTITPTSADVYSYSQDEDNLVIDPLLEKHLKHFGINMNDLKKTEKTLLQLEIEDNK NYNWLTDTDGSSLIHLEPRLIGILNLGNNCYLNSVLQLLNNVNEMNAFFINYYKVNFENR FENVNLFLLQYAKICTCINTTVFINKCNYILEHYKKLKLAESNNSSDEDVSDILTHNCFY INPNLFKYTLGMNSNVFNNNEQQDAEEFLSYFINYLFDNVKEVKSLFNIELKQIIICNEL KLINVNKIQTHILPLELINVINTKHLSNPLSNVDTNEIEIDINECLSGWYNGAMVDYINN GKVHKANLYNNLTNSPTYLFVKLNRFYMDKNVPKKLLNKVSVTGEHLQLNLNNLNLKEFG DYKLSGSENNKGFYENLKLLGFYGNSVDKVVNYYENLNQSQEHDGDHERTTVSYNLIGFI THIGSNVNSGHYICHLKKDNEWYAFNDTRISKSTNPPIHNGYIYLFQKS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TA21275.fa Sequence name : TA21275 Sequence length : 709 VALUES OF COMPUTED PARAMETERS Coef20 : 3.769 CoefTot : 0.000 ChDiff : -27 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.782 1.212 0.103 0.448 MesoH : -0.647 0.338 -0.419 0.214 MuHd_075 : 22.531 13.556 6.515 4.089 MuHd_095 : 34.842 18.190 9.858 6.297 MuHd_100 : 39.861 19.810 10.823 6.492 MuHd_105 : 40.007 19.581 10.551 6.184 Hmax_075 : 6.825 9.800 1.310 3.430 Hmax_095 : 18.500 18.200 4.398 5.910 Hmax_100 : 18.100 17.800 4.119 5.250 Hmax_105 : 4.500 7.262 0.511 3.045 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7524 0.2476 DFMC : 0.7452 0.2548
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 709 TA21275 MTELSLEFDRLCNELGLSVPDPNTVVHKTECLYSIDNEYSVNGIYVNLLTYQSFGKEMLKFDPIYPNCIYLNITKRLIPY 80 KEEENEVNTNEESTHEEGVVFKEKKSYDESVEYKVYSPQLGSIALDQTFGQLLNICNSIIGHAGYEFKNNELSFSDILQV 160 KDYTIESKHSKDLYQVENPKQINYENVKCEKCNSTTNLWLNLSDGYVGCGRKNYNSGGCQDGTEGAAILHYQETGSKYHL 240 AVKIGTITPTSADVYSYSQDEDNLVIDPLLEKHLKHFGINMNDLKKTEKTLLQLEIEDNKNYNWLTDTDGSSLIHLEPRL 320 IGILNLGNNCYLNSVLQLLNNVNEMNAFFINYYKVNFENRFENVNLFLLQYAKICTCINTTVFINKCNYILEHYKKLKLA 400 ESNNSSDEDVSDILTHNCFYINPNLFKYTLGMNSNVFNNNEQQDAEEFLSYFINYLFDNVKEVKSLFNIELKQIIICNEL 480 KLINVNKIQTHILPLELINVINTKHLSNPLSNVDTNEIEIDINECLSGWYNGAMVDYINNGKVHKANLYNNLTNSPTYLF 560 VKLNRFYMDKNVPKKLLNKVSVTGEHLQLNLNNLNLKEFGDYKLSGSENNKGFYENLKLLGFYGNSVDKVVNYYENLNQS 640 QEHDGDHERTTVSYNLIGFITHIGSNVNSGHYICHLKKDNEWYAFNDTRISKSTNPPIHNGYIYLFQKS 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ..................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TA21275 10 LSLEFDR|LC 0.076 . TA21275 28 PNTVVHK|TE 0.057 . TA21275 56 TYQSFGK|EM 0.061 . TA21275 60 FGKEMLK|FD 0.060 . TA21275 75 IYLNITK|RL 0.057 . TA21275 76 YLNITKR|LI 0.191 . TA21275 81 KRLIPYK|EE 0.073 . TA21275 102 EEGVVFK|EK 0.065 . TA21275 104 GVVFKEK|KS 0.065 . TA21275 105 VVFKEKK|SY 0.183 . TA21275 114 DESVEYK|VY 0.091 . TA21275 148 HAGYEFK|NN 0.071 . TA21275 161 SDILQVK|DY 0.073 . TA21275 168 DYTIESK|HS 0.059 . TA21275 171 IESKHSK|DL 0.129 . TA21275 180 YQVENPK|QI 0.062 . TA21275 188 INYENVK|CE 0.055 . TA21275 191 ENVKCEK|CN 0.066 . TA21275 211 GYVGCGR|KN 0.082 . TA21275 212 YVGCGRK|NY 0.074 . TA21275 237 YQETGSK|YH 0.057 . TA21275 243 KYHLAVK|IG 0.058 . TA21275 272 IDPLLEK|HL 0.059 . TA21275 275 LLEKHLK|HF 0.079 . TA21275 285 INMNDLK|KT 0.074 . TA21275 286 NMNDLKK|TE 0.084 . TA21275 289 DLKKTEK|TL 0.061 . TA21275 300 LEIEDNK|NY 0.058 . TA21275 319 LIHLEPR|LI 0.110 . TA21275 354 FFINYYK|VN 0.058 . TA21275 360 KVNFENR|FE 0.105 . TA21275 373 FLLQYAK|IC 0.060 . TA21275 386 TTVFINK|CN 0.071 . TA21275 395 YILEHYK|KL 0.061 . TA21275 396 ILEHYKK|LK 0.089 . TA21275 398 EHYKKLK|LA 0.076 . TA21275 427 INPNLFK|YT 0.068 . TA21275 461 YLFDNVK|EV 0.066 . TA21275 464 DNVKEVK|SL 0.087 . TA21275 472 LFNIELK|QI 0.067 . TA21275 481 IICNELK|LI 0.064 . TA21275 487 KLINVNK|IQ 0.077 . TA21275 504 INVINTK|HL 0.074 . TA21275 542 DYINNGK|VH 0.054 . TA21275 545 NNGKVHK|AN 0.065 . TA21275 562 PTYLFVK|LN 0.059 . TA21275 565 LFVKLNR|FY 0.099 . TA21275 570 NRFYMDK|NV 0.083 . TA21275 574 MDKNVPK|KL 0.067 . TA21275 575 DKNVPKK|LL 0.122 . TA21275 579 PKKLLNK|VS 0.062 . TA21275 597 LNNLNLK|EF 0.071 . TA21275 603 KEFGDYK|LS 0.062 . TA21275 611 SGSENNK|GF 0.073 . TA21275 618 GFYENLK|LL 0.071 . TA21275 629 YGNSVDK|VV 0.076 . TA21275 649 HDGDHER|TT 0.080 . TA21275 677 HYICHLK|KD 0.056 . TA21275 678 YICHLKK|DN 0.126 . TA21275 689 YAFNDTR|IS 0.076 . TA21275 692 NDTRISK|ST 0.185 . TA21275 708 YIYLFQK|S- 0.080 . ____________________________^_________________

  • Fasta :-

    >TA21275 ATGACTGAGTTATCTCTTGAATTCGACAGACTGTGTAATGAATTAGGCTTATCGGTTCCG GATCCTAACACAGTTGTACATAAAACAGAGTGTTTATACAGTATCGATAATGAATATTCT GTCAACGGAATCTATGTAAATTTACTGACATACCAATCCTTTGGGAAGGAAATGCTCAAA TTTGATCCAATATACCCCAATTGTATATATTTGAACATAACAAAAAGATTAATTCCCTAC AAAGAGGAGGAAAATGAAGTGAACACTAATGAAGAATCAACACACGAGGAAGGTGTAGTT TTTAAGGAAAAGAAATCCTATGATGAAAGTGTTGAATATAAAGTCTACTCGCCACAGTTA GGCTCGATAGCGCTGGACCAAACATTTGGCCAACTATTAAACATTTGCAATTCAATAATT GGACATGCCGGATATGAATTCAAAAATAACGAACTTTCTTTTTCAGATATTTTACAAGTA AAAGATTACACAATAGAAAGTAAACATAGTAAGGATTTATACCAAGTTGAGAATCCAAAA CAAATAAACTATGAAAATGTGAAGTGTGAAAAGTGCAATTCCACAACGAATTTGTGGTTA AACCTATCCGACGGATACGTTGGGTGTGGAAGAAAGAACTATAACAGCGGGGGTTGCCAA GATGGTACAGAAGGAGCAGCAATACTTCATTATCAAGAAACAGGATCCAAATATCACTTG GCAGTAAAAATTGGAACTATAACACCAACATCAGCTGATGTGTATAGTTACTCACAGGAT GAAGATAATTTAGTAATTGACCCATTGTTAGAAAAACATTTGAAACACTTTGGAATCAAT ATGAATGATTTGAAAAAAACGGAAAAAACACTCTTGCAACTTGAAATCGAAGACAATAAA AATTATAATTGGCTAACAGATACAGATGGCTCATCATTAATACATTTAGAACCAAGATTG ATTGGGATATTGAATTTGGGGAACAACTGTTACCTCAACAGTGTCTTGCAGCTTTTAAAT AATGTAAACGAGATGAACGCATTTTTTATTAATTATTACAAAGTTAACTTCGAGAATAGA TTTGAAAATGTTAATTTATTTCTACTCCAGTATGCCAAGATCTGCACATGCATCAATACC ACGGTTTTTATTAACAAGTGCAATTACATTCTTGAGCACTACAAAAAATTAAAACTGGCT GAATCCAACAACTCGAGCGACGAAGATGTGAGTGATATACTAACACATAACTGTTTTTAC ATTAACCCAAACCTTTTCAAATACACACTGGGAATGAATAGTAATGTGTTCAATAATAAC GAACAACAAGACGCAGAAGAGTTCTTGAGTTATTTCATAAATTATCTGTTCGACAATGTT AAGGAAGTCAAATCACTATTCAACATTGAGCTAAAACAAATCATAATCTGTAACGAGTTA AAGTTGATTAACGTAAACAAGATACAAACACACATTTTGCCGCTTGAACTGATTAACGTG ATCAACACTAAGCATCTGAGTAATCCACTATCAAATGTGGATACAAATGAGATAGAAATC GATATAAACGAATGTTTATCGGGATGGTACAACGGTGCAATGGTAGATTACATAAATAAC GGAAAGGTCCACAAGGCTAATTTGTATAACAACCTAACGAATTCACCCACTTATTTGTTC GTTAAGCTGAACCGTTTTTACATGGACAAAAATGTCCCGAAGAAGTTACTCAACAAAGTC TCAGTTACTGGAGAACATTTGCAATTGAATTTGAATAACCTTAACTTGAAGGAATTTGGA GATTACAAACTCTCAGGCTCAGAGAATAATAAAGGATTTTACGAAAACTTGAAGTTGCTA GGTTTCTATGGAAACTCGGTGGATAAAGTCGTAAATTATTACGAAAACTTAAATCAAAGC CAAGAACATGACGGGGACCATGAGAGAACAACAGTCTCTTACAACCTGATTGGATTCATA ACACACATTGGAAGTAACGTCAACTCAGGACATTACATTTGTCACCTAAAGAAGGATAAC GAATGGTACGCTTTCAATGATACCAGAATTAGCAAGTCCACTAATCCTCCAATACATAAT GGATACATTTATCTATTTCAAAAGTCATAA
  • Download Fasta

  • Fasta :-

    MTELSLEFDRLCNELGLSVPDPNTVVHKTECLYSIDNEYSVNGIYVNLLTYQSFGKEMLK FDPIYPNCIYLNITKRLIPYKEEENEVNTNEESTHEEGVVFKEKKSYDESVEYKVYSPQL GSIALDQTFGQLLNICNSIIGHAGYEFKNNELSFSDILQVKDYTIESKHSKDLYQVENPK QINYENVKCEKCNSTTNLWLNLSDGYVGCGRKNYNSGGCQDGTEGAAILHYQETGSKYHL AVKIGTITPTSADVYSYSQDEDNLVIDPLLEKHLKHFGINMNDLKKTEKTLLQLEIEDNK NYNWLTDTDGSSLIHLEPRLIGILNLGNNCYLNSVLQLLNNVNEMNAFFINYYKVNFENR FENVNLFLLQYAKICTCINTTVFINKCNYILEHYKKLKLAESNNSSDEDVSDILTHNCFY INPNLFKYTLGMNSNVFNNNEQQDAEEFLSYFINYLFDNVKEVKSLFNIELKQIIICNEL KLINVNKIQTHILPLELINVINTKHLSNPLSNVDTNEIEIDINECLSGWYNGAMVDYINN GKVHKANLYNNLTNSPTYLFVKLNRFYMDKNVPKKLLNKVSVTGEHLQLNLNNLNLKEFG DYKLSGSENNKGFYENLKLLGFYGNSVDKVVNYYENLNQSQEHDGDHERTTVSYNLIGFI THIGSNVNSGHYICHLKKDNEWYAFNDTRISKSTNPPIHNGYIYLFQKS

  • title: Active Site
  • coordinates: N325,C330,H671,D687
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TA21275106 SKEKKSYDES0.997unspTA21275406 SSNNSSDEDV0.993unsp

TA21275      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India