TGME49_204040 | hypothetical protein

UniProt_ID:

Computed_GO_Component_IDs: GO:0016021
Computed_GO_Components: integral component of membrane
Computed_GO_Function_IDs: GO:0004190
Computed_GO_Functions: aspartic-type endopeptidase activity
Computed_GO_Process_IDs: GO:0016485
Computed_GO_Processes: protein processing
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TGME49_204040	OTHER	0.999992	0.000007	0.000001

No Results

Fasta :-
>TGME49_204040 MREVRGVPQTEGERSDGHQRLPPTPRSSRPALAPESAFETDGRGRTLERLQRLERMHCQL VSAIRREANQVATLLVTGLLRPVVICMLTATLMSLLLTSPSPPSLPTAPPPCFPSPDSPP SCVSSSSTADAPSEGGSVSLSSSPASSLRRSRSFVRDVSRAVCTVRRLFSLVHGEFVSHF FELGLDALLYVAVLTFGLALAIRWGWHRLLYYLMASSAAFSLVAGCGGAVYLFACRYLQP KAGAVTQNVAFPAGKAPVFRQETNGDDGGVLVATEQNSLLAFVSHSVFSTSHLKDGVSSL SVAPQLDTVLVLIALWNLCVGGAFALLWLAPLRIRSQFLVATSSAAAFTLQLLLLHFGAK YSPESPSTPTTFLLLCLAAWDIFAVLSPWGPLRWILQGLRSTDARPMPLLAYEASLARPV LPHAGVRSARMASEPAGPGAPSARDTPSGVWTPGSLWSVAEPGSPLQRGEAGETRTGVNG REVRIRMRLPEYGSRRSCLAEEQNLQLEPLAAGFLIQDERSRFDAEVRRRHISEAAAAGG DSQASRSRGRSRGQPVLEETERRGNGGSLTGVQGMAVTGVGQLGVYTPREVGRGGAEQRA PEDAECDGEGRESSKARLSFAGGEQETMRGGEEEVEDVNGRVRSRGESERHRPNTQEGRG AATREGWPTGDPLGRSNETETAEEREKILEMEIATIKQQLHRLGRGSGRAMLGLGDFVFY SLLACNLTSWSLAAGLAGSVAVWVGLIITAAGTTFGPCHFLPALPLSIVLGLGVGTGVFY FVEPQAEYLISVDAFF
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_204040.fa Sequence name : TGME49_204040 Sequence length : 796 VALUES OF COMPUTED PARAMETERS Coef20 : 3.202 CoefTot : 0.135 ChDiff : 1 ZoneTo : 2 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.206 2.224 0.482 0.821 MesoH : 1.524 1.394 0.207 0.614 MuHd_075 : 4.280 3.875 2.592 3.184 MuHd_095 : 23.708 14.408 5.947 5.646 MuHd_100 : 22.911 13.556 4.513 4.678 MuHd_105 : 19.879 14.050 4.130 4.535 Hmax_075 : -15.000 -5.775 -5.387 0.300 Hmax_095 : -9.800 -1.400 -3.713 1.140 Hmax_100 : -2.200 1.200 -3.623 1.640 Hmax_105 : -12.367 -0.817 -4.284 0.618 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9224 0.0776 DFMC : 0.9467 0.0533

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 796 TGME49_204040 MREVRGVPQTEGERSDGHQRLPPTPRSSRPALAPESAFETDGRGRTLERLQRLERMHCQLVSAIRREANQVATLLVTGLL 80 RPVVICMLTATLMSLLLTSPSPPSLPTAPPPCFPSPDSPPSCVSSSSTADAPSEGGSVSLSSSPASSLRRSRSFVRDVSR 160 AVCTVRRLFSLVHGEFVSHFFELGLDALLYVAVLTFGLALAIRWGWHRLLYYLMASSAAFSLVAGCGGAVYLFACRYLQP 240 KAGAVTQNVAFPAGKAPVFRQETNGDDGGVLVATEQNSLLAFVSHSVFSTSHLKDGVSSLSVAPQLDTVLVLIALWNLCV 320 GGAFALLWLAPLRIRSQFLVATSSAAAFTLQLLLLHFGAKYSPESPSTPTTFLLLCLAAWDIFAVLSPWGPLRWILQGLR 400 STDARPMPLLAYEASLARPVLPHAGVRSARMASEPAGPGAPSARDTPSGVWTPGSLWSVAEPGSPLQRGEAGETRTGVNG 480 REVRIRMRLPEYGSRRSCLAEEQNLQLEPLAAGFLIQDERSRFDAEVRRRHISEAAAAGGDSQASRSRGRSRGQPVLEET 560 ERRGNGGSLTGVQGMAVTGVGQLGVYTPREVGRGGAEQRAPEDAECDGEGRESSKARLSFAGGEQETMRGGEEEVEDVNG 640 RVRSRGESERHRPNTQEGRGAATREGWPTGDPLGRSNETETAEEREKILEMEIATIKQQLHRLGRGSGRAMLGLGDFVFY 720 SLLACNLTSWSLAAGLAGSVAVWVGLIITAAGTTFGPCHFLPALPLSIVLGLGVGTGVFYFVEPQAEYLISVDAFF 800 ....P........................................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ............................................................................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_204040 2 -----MR|EV 0.173 . TGME49_204040 5 --MREVR|GV 0.515 *ProP* TGME49_204040 14 PQTEGER|SD 0.099 . TGME49_204040 20 RSDGHQR|LP 0.071 . TGME49_204040 26 RLPPTPR|SS 0.169 . TGME49_204040 29 PTPRSSR|PA 0.240 . TGME49_204040 43 AFETDGR|GR 0.080 . TGME49_204040 45 ETDGRGR|TL 0.087 . TGME49_204040 49 RGRTLER|LQ 0.081 . TGME49_204040 52 TLERLQR|LE 0.141 . TGME49_204040 55 RLQRLER|MH 0.228 . TGME49_204040 65 QLVSAIR|RE 0.078 . TGME49_204040 66 LVSAIRR|EA 0.218 . TGME49_204040 81 LVTGLLR|PV 0.090 . TGME49_204040 149 SPASSLR|RS 0.089 . TGME49_204040 150 PASSLRR|SR 0.267 . TGME49_204040 152 SSLRRSR|SF 0.296 . TGME49_204040 156 RSRSFVR|DV 0.267 . TGME49_204040 160 FVRDVSR|AV 0.166 . TGME49_204040 166 RAVCTVR|RL 0.092 . TGME49_204040 167 AVCTVRR|LF 0.121 . TGME49_204040 203 GLALAIR|WG 0.081 . TGME49_204040 208 IRWGWHR|LL 0.091 . TGME49_204040 236 VYLFACR|YL 0.080 . TGME49_204040 241 CRYLQPK|AG 0.066 . TGME49_204040 255 VAFPAGK|AP 0.057 . TGME49_204040 260 GKAPVFR|QE 0.134 . TGME49_204040 294 FSTSHLK|DG 0.061 . TGME49_204040 333 LWLAPLR|IR 0.088 . TGME49_204040 335 LAPLRIR|SQ 0.096 . TGME49_204040 360 LLHFGAK|YS 0.072 . TGME49_204040 393 SPWGPLR|WI 0.152 . TGME49_204040 400 WILQGLR|ST 0.090 . TGME49_204040 405 LRSTDAR|PM 0.092 . TGME49_204040 418 YEASLAR|PV 0.101 . TGME49_204040 427 LPHAGVR|SA 0.165 . TGME49_204040 430 AGVRSAR|MA 0.391 . TGME49_204040 444 PGAPSAR|DT 0.178 . TGME49_204040 468 PGSPLQR|GE 0.105 . TGME49_204040 475 GEAGETR|TG 0.081 . TGME49_204040 481 RTGVNGR|EV 0.128 . TGME49_204040 484 VNGREVR|IR 0.169 . TGME49_204040 486 GREVRIR|MR 0.110 . TGME49_204040 488 EVRIRMR|LP 0.081 . TGME49_204040 495 LPEYGSR|RS 0.081 . TGME49_204040 496 PEYGSRR|SC 0.249 . TGME49_204040 520 FLIQDER|SR 0.118 . TGME49_204040 522 IQDERSR|FD 0.087 . TGME49_204040 528 RFDAEVR|RR 0.084 . TGME49_204040 529 FDAEVRR|RH 0.111 . TGME49_204040 530 DAEVRRR|HI 0.184 . TGME49_204040 546 GDSQASR|SR 0.234 . TGME49_204040 548 SQASRSR|GR 0.132 . TGME49_204040 550 ASRSRGR|SR 0.162 . TGME49_204040 552 RSRGRSR|GQ 0.127 . TGME49_204040 562 VLEETER|RG 0.073 . TGME49_204040 563 LEETERR|GN 0.240 . TGME49_204040 589 LGVYTPR|EV 0.170 . TGME49_204040 593 TPREVGR|GG 0.139 . TGME49_204040 599 RGGAEQR|AP 0.137 . TGME49_204040 611 ECDGEGR|ES 0.092 . TGME49_204040 615 EGRESSK|AR 0.061 . TGME49_204040 617 RESSKAR|LS 0.239 . TGME49_204040 629 GEQETMR|GG 0.117 . TGME49_204040 641 VEDVNGR|VR 0.086 . TGME49_204040 643 DVNGRVR|SR 0.167 . TGME49_204040 645 NGRVRSR|GE 0.088 . TGME49_204040 650 SRGESER|HR 0.095 . TGME49_204040 652 GESERHR|PN 0.130 . TGME49_204040 659 PNTQEGR|GA 0.117 . TGME49_204040 664 GRGAATR|EG 0.099 . TGME49_204040 675 TGDPLGR|SN 0.169 . TGME49_204040 685 TETAEER|EK 0.072 . TGME49_204040 687 TAEEREK|IL 0.075 . TGME49_204040 697 MEIATIK|QQ 0.057 . TGME49_204040 702 IKQQLHR|LG 0.100 . TGME49_204040 705 QLHRLGR|GS 0.444 . TGME49_204040 709 LGRGSGR|AM 0.096 . ____________________________^_________________

Fasta :-
>TGME49_204040 ATGCGGGAGGTTCGTGGCGTCCCTCAGACTGAGGGCGAGAGGAGTGACGGACATCAGCGC CTGCCTCCCACCCCGCGCTCTTCGCGGCCCGCGCTTGCCCCCGAGAGCGCGTTCGAGACG GACGGAAGAGGTCGAACTCTGGAGAGGCTTCAGAGGCTTGAACGCATGCACTGCCAACTT GTGAGCGCCATCCGGAGGGAGGCAAACCAAGTGGCGACGCTTCTTGTAACGGGTCTGCTT CGTCCTGTAGTCATCTGCATGCTCACTGCAACGCTCATGTCCTTGCTTTTGACCTCTCCC TCCCCTCCCAGTCTTCCCACCGCTCCCCCTCCTTGTTTTCCCTCTCCTGACTCTCCTCCT TCATGTGTCTCGTCGTCCTCTACGGCAGACGCACCTTCTGAGGGAGGCAGCGTGTCTCTC TCCTCGTCTCCTGCGTCTTCGCTCCGGCGCTCGCGTAGTTTCGTCCGAGACGTTTCTCGA GCCGTCTGTACAGTGCGCCGCCTCTTCAGTCTCGTTCACGGGGAGTTTGTCTCGCACTTC TTCGAACTGGGTCTCGACGCGCTCCTCTACGTCGCCGTCCTCACCTTTGGTCTGGCTCTC GCGATCCGCTGGGGATGGCATCGACTTCTCTATTACCTAATGGCTTCCTCGGCCGCCTTC AGCCTCGTTGCCGGTTGCGGAGGAGCGGTCTATTTGTTTGCATGCAGGTATTTGCAGCCT AAGGCAGGCGCGGTGACACAGAACGTCGCCTTTCCCGCAGGCAAGGCCCCCGTTTTCCGT CAAGAAACGAACGGAGACGATGGGGGTGTTCTCGTTGCAACTGAGCAAAACAGTCTGCTG GCTTTCGTATCACACTCCGTTTTTTCCACGAGCCACCTGAAAGATGGCGTCTCCAGTCTG TCGGTTGCTCCGCAGCTCGACACCGTGCTCGTACTCATCGCTCTCTGGAACCTCTGCGTG GGTGGGGCGTTTGCTCTTCTCTGGCTAGCCCCCCTCCGAATCCGAAGTCAATTCTTGGTG GCCACTTCAAGCGCCGCCGCCTTCACCCTCCAACTTCTCCTGCTTCATTTCGGTGCCAAA TATAGCCCAGAATCGCCGTCGACGCCCACGACATTCCTTCTTCTCTGCTTGGCTGCTTGG GATATCTTTGCAGTGCTCTCGCCCTGGGGACCACTTCGATGGATTTTACAGGGCTTGAGG TCTACTGACGCCAGACCAATGCCTCTCCTCGCCTACGAAGCCTCTCTCGCTCGTCCGGTG CTGCCGCATGCGGGCGTTAGGTCGGCGCGGATGGCTTCTGAACCGGCCGGTCCCGGTGCG CCTTCAGCCCGGGACACCCCTTCAGGTGTCTGGACACCTGGATCCCTGTGGTCAGTGGCT GAGCCCGGCTCGCCACTGCAGCGGGGGGAGGCCGGTGAAACGCGAACTGGCGTCAACGGA CGTGAGGTTCGCATTCGTATGCGTCTCCCGGAATATGGCAGCAGGCGCAGCTGTCTTGCA GAGGAACAGAACTTGCAGTTGGAGCCACTGGCAGCTGGATTTCTCATTCAAGACGAACGG TCACGCTTTGACGCAGAAGTCCGGAGGCGGCATATCTCGGAGGCAGCCGCCGCGGGTGGC GACAGCCAGGCATCTAGAAGCCGCGGACGAAGCAGGGGACAGCCAGTTCTCGAGGAAACA GAGAGACGAGGAAATGGCGGGTCACTCACTGGTGTCCAGGGGATGGCCGTGACAGGCGTC GGACAGTTGGGTGTCTATACACCCCGAGAGGTGGGGAGAGGAGGAGCAGAACAGCGAGCA CCTGAAGATGCCGAGTGCGATGGAGAAGGGCGTGAATCAAGCAAGGCGCGTCTCTCTTTC GCTGGCGGAGAACAGGAGACCATGAGGGGTGGAGAGGAAGAAGTCGAGGACGTAAACGGA AGAGTTCGCTCACGCGGTGAATCCGAAAGGCATCGGCCAAACACACAAGAAGGTCGAGGT GCTGCAACACGAGAGGGGTGGCCTACAGGGGATCCGCTGGGTCGAAGCAATGAAACTGAG ACAGCTGAAGAGAGGGAGAAGATTTTAGAAATGGAAATTGCGACCATCAAGCAGCAACTA CACAGGCTGGGTCGAGGCAGTGGACGAGCCATGCTGGGCCTTGGCGATTTCGTCTTTTAT TCCCTCCTTGCATGCAATTTGACGAGCTGGAGCCTCGCAGCTGGACTGGCAGGAAGCGTT GCTGTGTGGGTGGGACTTATCATTACCGCTGCGGGGACGACCTTTGGTCCGTGCCACTTC CTTCCAGCCCTTCCTCTCTCTATCGTCCTCGGCCTAGGAGTGGGAACTGGCGTCTTCTAC TTTGTCGAGCCCCAGGCAGAATATCTCATTTCAGTCGACGCCTTCTTCTGA
Download Fasta

Fasta :-

MREVRGVPQTEGERSDGHQRLPPTPRSSRPALAPESAFETDGRGRTLERLQRLERMHCQL VSAIRREANQVATLLVTGLLRPVVICMLTATLMSLLLTSPSPPSLPTAPPPCFPSPDSPP SCVSSSSTADAPSEGGSVSLSSSPASSLRRSRSFVRDVSRAVCTVRRLFSLVHGEFVSHF FELGLDALLYVAVLTFGLALAIRWGWHRLLYYLMASSAAFSLVAGCGGAVYLFACRYLQP KAGAVTQNVAFPAGKAPVFRQETNGDDGGVLVATEQNSLLAFVSHSVFSTSHLKDGVSSL SVAPQLDTVLVLIALWNLCVGGAFALLWLAPLRIRSQFLVATSSAAAFTLQLLLLHFGAK YSPESPSTPTTFLLLCLAAWDIFAVLSPWGPLRWILQGLRSTDARPMPLLAYEASLARPV LPHAGVRSARMASEPAGPGAPSARDTPSGVWTPGSLWSVAEPGSPLQRGEAGETRTGVNG REVRIRMRLPEYGSRRSCLAEEQNLQLEPLAAGFLIQDERSRFDAEVRRRHISEAAAAGG DSQASRSRGRSRGQPVLEETERRGNGGSLTGVQGMAVTGVGQLGVYTPREVGRGGAEQRA PEDAECDGEGRESSKARLSFAGGEQETMRGGEEEVEDVNGRVRSRGESERHRPNTQEGRG AATREGWPTGDPLGRSNETETAEEREKILEMEIATIKQQLHRLGRGSGRAMLGLGDFVFY SLLACNLTSWSLAAGLAGSVAVWVGLIITAAGTTFGPCHFLPALPLSIVLGLGVGTGVFY FVEPQAEYLISVDAFF

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TGME49_204040	365 S	YSPESPSTP	0.993	unsp	TGME49_204040	365 S	YSPESPSTP	0.993	unsp	TGME49_204040	365 S	YSPESPSTP	0.993	unsp	TGME49_204040	442 S	PGAPSARDT	0.997	unsp	TGME49_204040	446 T	SARDTPSGV	0.993	unsp	TGME49_204040	521 S	QDERSRFDA	0.997	unsp	TGME49_204040	545 S	DSQASRSRG	0.994	unsp	TGME49_204040	547 S	QASRSRGRS	0.994	unsp	TGME49_204040	551 S	SRGRSRGQP	0.995	unsp	TGME49_204040	587 T	LGVYTPREV	0.992	unsp	TGME49_204040	613 S	EGRESSKAR	0.995	unsp	TGME49_204040	644 S	GRVRSRGES	0.995	unsp	TGME49_204040	648 S	SRGESERHR	0.996	unsp	TGME49_204040	707 S	LGRGSGRAM	0.991	unsp	TGME49_204040	147 S	SPASSLRRS	0.996	unsp	TGME49_204040	151 S	SLRRSRSFV	0.99	unsp

TGME49_204040 | hypothetical protein

ID's

UniProt_ID:

GEO Functions

Computed_GO_Component_IDs: GO:0016021

Computed_GO_Components: integral component of membrane

Computed_GO_Function_IDs: GO:0004190

Computed_GO_Functions: aspartic-type endopeptidase activity

Computed_GO_Process_IDs: GO:0016485

Computed_GO_Processes: protein processing

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TGME49_004040

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India