TGME49_209530 | hypothetical protein

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  • Computed_GO_Function_IDs:        

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_209530OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >TGME49_209530 MTLVPSPSSSSSSCSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSASHLPASHRSSAPLRKAAFATLEEYLRVARIYFFAGFCF LPILWFLNVRMFTESRLTLLSLRVHSAIQESQRVNSDPEKGDRREKNRRRKEDSSPTEGA ARLSTSPVLSSSLDSELRLDLQAVRRKDDAEDQQEEREARKREAEQEGEEEQQRGDEEDD ERERELEAEREREQDGEEQERQGGAYRLTRRDALKKLQDLRSYASKSRRALWGSGALLLI WAVTFQVLCASNAAWSEFFRLPCPPPFLSCLSRACTPSSLPYSPSVGCASIASPSSSSFG DVPPSLTPVSVSPSGFPALVVDSISLSSSASSPHFPSSSSSAFPLSASASLRRAASPGAS LQLRDYREAARARADEG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_209530.fa Sequence name : TGME49_209530 Sequence length : 437 VALUES OF COMPUTED PARAMETERS Coef20 : 4.721 CoefTot : 8.737 ChDiff : -3 ZoneTo : 103 KR : 3 DE : 0 CleavSite : 98 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.994 1.912 0.306 0.818 MesoH : 0.862 0.687 0.057 0.346 MuHd_075 : 16.657 9.184 5.449 3.236 MuHd_095 : 23.075 14.391 7.300 4.167 MuHd_100 : 24.500 11.459 7.153 4.274 MuHd_105 : 28.260 16.161 7.176 6.045 Hmax_075 : 7.200 5.688 0.325 3.127 Hmax_095 : 11.200 9.362 1.510 3.456 Hmax_100 : 10.200 4.400 1.103 2.200 Hmax_105 : 11.600 11.400 1.459 3.700 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0942 0.9058 DFMC : 0.0011 0.9989 This protein is probably imported in chloroplast. f(Ser) = 0.7573 f(Arg) = 0.0194 CMi = 7.79221 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 437 TGME49_209530 MTLVPSPSSSSSSCSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 80 SASHLPASHRSSAPLRKAAFATLEEYLRVARIYFFAGFCFLPILWFLNVRMFTESRLTLLSLRVHSAIQESQRVNSDPEK 160 GDRREKNRRRKEDSSPTEGAARLSTSPVLSSSLDSELRLDLQAVRRKDDAEDQQEEREARKREAEQEGEEEQQRGDEEDD 240 ERERELEAEREREQDGEEQERQGGAYRLTRRDALKKLQDLRSYASKSRRALWGSGALLLIWAVTFQVLCASNAAWSEFFR 320 LPCPPPFLSCLSRACTPSSLPYSPSVGCASIASPSSSSFGDVPPSLTPVSVSPSGFPALVVDSISLSSSASSPHFPSSSS 400 SAFPLSASASLRRAASPGASLQLRDYREAARARADEG 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ..................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_209530 90 HLPASHR|SS 0.136 . TGME49_209530 96 RSSAPLR|KA 0.126 . TGME49_209530 97 SSAPLRK|AA 0.138 . TGME49_209530 108 TLEEYLR|VA 0.086 . TGME49_209530 111 EYLRVAR|IY 0.213 . TGME49_209530 130 LWFLNVR|MF 0.088 . TGME49_209530 136 RMFTESR|LT 0.075 . TGME49_209530 143 LTLLSLR|VH 0.083 . TGME49_209530 153 AIQESQR|VN 0.105 . TGME49_209530 160 VNSDPEK|GD 0.071 . TGME49_209530 163 DPEKGDR|RE 0.067 . TGME49_209530 164 PEKGDRR|EK 0.096 . TGME49_209530 166 KGDRREK|NR 0.130 . TGME49_209530 168 DRREKNR|RR 0.077 . TGME49_209530 169 RREKNRR|RK 0.207 . TGME49_209530 170 REKNRRR|KE 0.133 . TGME49_209530 171 EKNRRRK|ED 0.240 . TGME49_209530 182 PTEGAAR|LS 0.072 . TGME49_209530 198 SLDSELR|LD 0.071 . TGME49_209530 205 LDLQAVR|RK 0.093 . TGME49_209530 206 DLQAVRR|KD 0.172 . TGME49_209530 207 LQAVRRK|DD 0.103 . TGME49_209530 217 EDQQEER|EA 0.108 . TGME49_209530 220 QEEREAR|KR 0.323 . TGME49_209530 221 EEREARK|RE 0.078 . TGME49_209530 222 EREARKR|EA 0.385 . TGME49_209530 234 GEEEQQR|GD 0.088 . TGME49_209530 242 DEEDDER|ER 0.067 . TGME49_209530 244 EDDERER|EL 0.087 . TGME49_209530 250 RELEAER|ER 0.076 . TGME49_209530 252 LEAERER|EQ 0.095 . TGME49_209530 261 DGEEQER|QG 0.099 . TGME49_209530 267 RQGGAYR|LT 0.076 . TGME49_209530 270 GAYRLTR|RD 0.157 . TGME49_209530 271 AYRLTRR|DA 0.237 . TGME49_209530 275 TRRDALK|KL 0.076 . TGME49_209530 276 RRDALKK|LQ 0.075 . TGME49_209530 281 KKLQDLR|SY 0.090 . TGME49_209530 286 LRSYASK|SR 0.103 . TGME49_209530 288 SYASKSR|RA 0.095 . TGME49_209530 289 YASKSRR|AL 0.336 . TGME49_209530 320 AWSEFFR|LP 0.089 . TGME49_209530 333 FLSCLSR|AC 0.096 . TGME49_209530 412 SASASLR|RA 0.125 . TGME49_209530 413 ASASLRR|AA 0.260 . TGME49_209530 424 GASLQLR|DY 0.147 . TGME49_209530 427 LQLRDYR|EA 0.254 . TGME49_209530 431 DYREAAR|AR 0.086 . TGME49_209530 433 REAARAR|AD 0.139 . ____________________________^_________________

  • Fasta :-

    >TGME49_209530 CCGTCACTTCTCGACAAGATACATGAATCAAGAGAACGGCAAGTGGCTAAGTGACTGCAA GCGTCGTCTCCGTGTTCCGCTAGACGCAGAAAAGGAAGAATTTGAACAGCTTTTCAAGCT GTTGAATTTGAATCCCGTTCGCAAGCCCAACAAGTGACATATCCGTTGCCACAGTGCTTG ACGCACCTTTATGTCTCGTTTTTACACACTCGCTAACCCAGCCAACTGTGCGAGGCGTTT CTCGCCTTGTTTTGCCTCTCCGCGGATTAAGGTTTCAGAGACAGGAGCAGGAGCCTTACC CGAAGGGCAGAAGAGTCTCGTCTACTGCGCCATGTTTGTCTTGAATCATGCGTTCTCTAT GCCCCTGGTTTCTTCCTTGGTAAATCCGTTTGAGAGATTTAACACACACCGGTGCTGAAG GAACTTCGTCCCCGGATTTCGGGCAACAGAAGAGAAAATGCGGTCAAAGCGAGCCTCCCT GTTTCCTGACGACCACAAAAGTGCATAGGGAACAGAAAAAAGCCGTAAACGCGTACGTCT GCCCCACAGCCATAAGGCGAGTCTACTGGACCCGTTCCTCCCTTCTTTGTCTTCATCGAT GACTCTTGTTCCCTCTCCTTCCTCTTCTTCTTCCTCCTGTTCTTCCTCTTCGTCTTCCTC TTCTTCCTCTTCCTCTTCTTCCTCTTCCTCTTCTTCCTCTTCTTCCTCTTCTTCCTCTTC TTCCTCTTCTTCCTCTTCCTCTTCTTCTTCCTCTTCTTCCTCTTCTTCCTCTTCCTCTTC TTCTTCCTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCTTCTTCGTCTTCATC TGCCTCACATCTGCCTGCATCTCACCGTTCTTCAGCGCCATTGAGGAAGGCGGCGTTTGC CACTCTGGAAGAGTACCTCAGAGTTGCGAGGATCTACTTTTTCGCAGGCTTTTGTTTCCT TCCGATTCTGTGGTTCCTCAACGTCCGCATGTTCACAGAAAGCCGCTTAACTCTCTTGTC TCTCCGAGTACACTCTGCCATTCAGGAATCTCAGAGAGTAAACAGCGATCCCGAGAAGGG AGACAGGCGAGAGAAAAACAGAAGAAGGAAGGAAGACTCATCCCCGACGGAAGGCGCCGC AAGGCTCTCGACCTCTCCGGTGCTCTCTTCTTCTCTAGATAGCGAACTTCGACTAGACTT GCAAGCCGTGCGAAGGAAAGACGATGCAGAAGACCAGCAAGAAGAACGCGAAGCACGCAA GAGAGAAGCAGAACAAGAAGGAGAGGAAGAACAACAGAGAGGAGACGAAGAGGACGACGA ACGAGAACGAGAACTAGAAGCGGAGAGGGAAAGAGAACAGGATGGCGAAGAACAGGAGAG ACAAGGAGGGGCGTATCGGTTGACACGAAGAGATGCTCTGAAAAAACTTCAAGACCTACG CTCTTATGCTTCAAAGTCGAGACGCGCCCTCTGGGGCAGTGGTGCGCTTCTTTTGATTTG GGCCGTCACGTTTCAAGTACTTTGCGCTTCAAACGCCGCATGGAGCGAGTTCTTTCGTCT CCCTTGCCCTCCGCCTTTTCTCAGTTGTCTTTCACGTGCTTGTACACCCTCGTCTCTGCC TTATTCCCCGTCTGTCGGCTGTGCTTCAATTGCTTCTCCGTCGTCCTCTTCATTCGGCGA TGTCCCACCTTCTCTCACACCAGTCTCTGTCTCGCCGTCAGGTTTCCCTGCACTGGTTGT TGACTCGATTTCTCTTTCTTCTTCTGCCTCTTCTCCACATTTCCCTTCCTCCTCTTCTTC CGCTTTTCCTCTCTCTGCGTCTGCCTCTTTGCGTCGCGCAGCCTCCCCAGGCGCCTCTCT GCAGCTGAGGGATTATCGAGAGGCCGCGCGAGCGCGTGCAGACGAGGGCTGAGAGGGCCA GAGTCTCCGAGAATCTGGGAAGGTCACTTTGTCTCTTCTCTGCAGACTGATGCAAGGCTG TATGCAAAACGTGGATTTTTGCGGTGTGGACTAACATGCAGCAGACCCAGGGAACAACAC AATGTGCTGATGGCTCTCTGCTCCGACGGTTGGCGGAGTGTCGCGTTCGACTGTGCAGAA GGAGGGGAAAAGGCCTTTGAAGCGAACGCGGTCTGCGTTTACGCATTTGCCTCGTTGGCA GAACCGGTTCATGGACGTTGACACCCGACGTCGCCTGAAGTCGCATGTTGTTTCAGCTGA CATGTTCACTTGCGAGGCGTATGTATAGAAAGGTGGAGAATCGTAGACAGATAGATAGCT GTCGAGAGATGCAAAAAGAAATAGAGAGGCGTGGACAGGTGTAGAAAAAACAGAGGCATA GAGAGATTTGGATAGAAAAAGATAAATAGAAATATATAGGTCTTAGAGGTGAACGGCGGA GTATATGACGAATGTTTGATGCGCATCGGCAAGAACCGACGTTTGCTCCGTCGCTGCTTC CTTCCATCTCC
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  • Fasta :-

    MTLVPSPSSSSSSCSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSASHLPASHRSSAPLRKAAFATLEEYLRVARIYFFAGFCF LPILWFLNVRMFTESRLTLLSLRVHSAIQESQRVNSDPEKGDRREKNRRRKEDSSPTEGA ARLSTSPVLSSSLDSELRLDLQAVRRKDDAEDQQEEREARKREAEQEGEEEQQRGDEEDD ERERELEAEREREQDGEEQERQGGAYRLTRRDALKKLQDLRSYASKSRRALWGSGALLLI WAVTFQVLCASNAAWSEFFRLPCPPPFLSCLSRACTPSSLPYSPSVGCASIASPSSSSFG DVPPSLTPVSVSPSGFPALVVDSISLSSSASSPHFPSSSSSAFPLSASASLRRAASPGAS LQLRDYREAARARADEG

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_20953022 SSSSSSSSSS0.99unspTGME49_20953072S SSSSSSSSS 0.990 unspTGME49_20953073S SSSSSSSSS 0.990 unspTGME49_20953074S SSSSSSSSS 0.990 unspTGME49_20953075S SSSSSSSSS 0.990 unspTGME49_20953076S SSSSSSSSS 0.990 unspTGME49_209530156S QRVNSDPEK 0.991 unspTGME49_20953022 SSSSSSSSSS0.99unspTGME49_20953072S SSSSSSSSS 0.990 unspTGME49_20953073S SSSSSSSSS 0.990 unspTGME49_20953074S SSSSSSSSS 0.990 unspTGME49_20953075S SSSSSSSSS 0.990 unspTGME49_20953076S SSSSSSSSS 0.990 unspTGME49_209530156S QRVNSDPEK 0.991 unspTGME49_20953022 SSSSSSSSSS0.99unspTGME49_20953072S SSSSSSSSS 0.990 unspTGME49_20953073S SSSSSSSSS 0.990 unspTGME49_20953074S SSSSSSSSS 0.990 unspTGME49_20953075S SSSSSSSSS 0.990 unspTGME49_20953076S SSSSSSSSS 0.990 unspTGME49_209530156S QRVNSDPEK 0.991 unspTGME49_209530175S KEDSSPTEG 0.998 unspTGME49_209530358S PSSSSFGDV 0.990 unspTGME49_209530372S PVSVSPSGF 0.991 unspTGME49_209530392S SSASSPHFP 0.994 unspTGME49_20953023 SSSSSSSSSS0.99unspTGME49_209530416S RRAASPGAS 0.993 unspTGME49_20953024 SSSSSSSSSS0.99unspTGME49_20953025 SSSSSSSSSS0.99unspTGME49_20953026 SSSSSSSSSS0.99unspTGME49_20953027 SSSSSSSSSS0.99unspTGME49_20953028 SSSSSSSSSS0.99unspTGME49_20953029 SSSSSSSSSS0.99unspTGME49_20953030 SSSSSSSSSS0.99unspTGME49_20953031 SSSSSSSSSS0.99unspTGME49_20953032 SSSSSSSSSS0.99unspTGME49_20953033 SSSSSSSSSS0.99unspTGME49_20953034 SSSSSSSSSS0.99unspTGME49_20953035 SSSSSSSSSS0.99unspTGME49_20953036 SSSSSSSSSS0.99unspTGME49_20953037 SSSSSSSSSS0.99unspTGME49_20953038 SSSSSSSSSS0.99unspTGME49_20953039 SSSSSSSSSS0.99unspTGME49_20953040 SSSSSSSSSS0.99unspTGME49_20953041 SSSSSSSSSS0.99unspTGME49_20953042 SSSSSSSSSS0.99unspTGME49_20953043 SSSSSSSSSS0.99unspTGME49_20953044 SSSSSSSSSS0.99unspTGME49_20953045 SSSSSSSSSS0.99unspTGME49_20953046 SSSSSSSSSS0.99unspTGME49_20953047 SSSSSSSSSS0.99unspTGME49_20953048 SSSSSSSSSS0.99unspTGME49_20953049 SSSSSSSSSS0.99unspTGME49_20953050 SSSSSSSSSS0.99unspTGME49_20953051 SSSSSSSSSS0.99unspTGME49_20953020 SSSSSSSSSS0.99unspTGME49_20953052 SSSSSSSSSS0.99unspTGME49_20953053 SSSSSSSSSS0.99unspTGME49_20953054 SSSSSSSSSS0.99unspTGME49_20953055 SSSSSSSSSS0.99unspTGME49_20953056 SSSSSSSSSS0.99unspTGME49_20953057 SSSSSSSSSS0.99unspTGME49_20953058 SSSSSSSSSS0.99unspTGME49_20953059 SSSSSSSSSS0.99unspTGME49_20953060 SSSSSSSSSS0.99unspTGME49_20953061 SSSSSSSSSS0.99unspTGME49_20953021 SSSSSSSSSS0.99unspTGME49_20953062 SSSSSSSSSS0.99unspTGME49_20953063 SSSSSSSSSS0.99unspTGME49_20953064 SSSSSSSSSS0.99unspTGME49_20953065 SSSSSSSSSS0.99unspTGME49_20953066 SSSSSSSSSS0.99unsp

TGME49_009530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India