TGME49_210678 | OTU family cysteine protease

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_210678OTHER0.9937420.0001730.006086
No Results

  • Fasta :-

    >TGME49_210678 MHSTNHQAPWSQTRTLVSSPSKMSVSAVEGTLPSNLFSVSRQQLASSPGSGYQYRDLLRP AKRLPLPLSPLEQTAMVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELN LESETKVNYRVHATLQGDICWTPSTASEEFDPESHSCADDAVIVSSFGIRVDAAELDLDR DADIVYDSAYEADNEEDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVAS TQTGEDFSGDEWEIPEEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQ PVCQSLSQLPRDMQAPPLEQSVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYD FKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSVSYALLGTEDAHAEIRQEVAH YLRGNFNRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLG DARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPT IFLIYDLQRQHYDVVEKVKPR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_210678.fa Sequence name : TGME49_210678 Sequence length : 561 VALUES OF COMPUTED PARAMETERS Coef20 : 3.915 CoefTot : -1.064 ChDiff : -34 ZoneTo : 101 KR : 9 DE : 3 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.794 1.406 0.116 0.585 MesoH : -0.638 0.196 -0.367 0.142 MuHd_075 : 33.845 17.827 8.882 7.380 MuHd_095 : 45.060 28.000 11.417 9.893 MuHd_100 : 47.927 25.924 11.318 11.026 MuHd_105 : 48.341 29.207 12.071 10.822 Hmax_075 : 11.800 14.600 3.825 5.160 Hmax_095 : 10.200 21.350 6.198 6.458 Hmax_100 : 12.400 14.100 1.922 5.400 Hmax_105 : 18.200 24.267 3.946 4.830 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7024 0.2976 DFMC : 0.5760 0.4240
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 561 TGME49_210678 MHSTNHQAPWSQTRTLVSSPSKMSVSAVEGTLPSNLFSVSRQQLASSPGSGYQYRDLLRPAKRLPLPLSPLEQTAMVLSS 80 GWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELNLESETKVNYRVHATLQGDICWTPSTASEEFDPESHSCADD 160 AVIVSSFGIRVDAAELDLDRDADIVYDSAYEADNEEDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVAS 240 TQTGEDFSGDEWEIPEEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQPVCQSLSQLPRDMQAPPLEQ 320 SVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSV 400 SYALLGTEDAHAEIRQEVAHYLRGNFNRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLG 480 DARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVVEKVKP 560 R 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 . 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_210678 14 APWSQTR|TL 0.089 . TGME49_210678 22 LVSSPSK|MS 0.070 . TGME49_210678 41 NLFSVSR|QQ 0.083 . TGME49_210678 55 GSGYQYR|DL 0.114 . TGME49_210678 59 QYRDLLR|PA 0.076 . TGME49_210678 62 DLLRPAK|RL 0.082 . TGME49_210678 63 LLRPAKR|LP 0.118 . TGME49_210678 83 VLSSGWR|AL 0.085 . TGME49_210678 87 GWRALIR|CC 0.124 . TGME49_210678 103 NVSASDK|QE 0.061 . TGME49_210678 113 APSFVGR|VD 0.173 . TGME49_210678 126 NLESETK|VN 0.064 . TGME49_210678 130 ETKVNYR|VH 0.081 . TGME49_210678 170 VSSFGIR|VD 0.089 . TGME49_210678 180 AELDLDR|DA 0.111 . TGME49_210678 213 DADESPR|SS 0.122 . TGME49_210678 267 AEGMTTR|TP 0.086 . TGME49_210678 287 GDGNEEK|IF 0.065 . TGME49_210678 291 EEKIFGR|FA 0.112 . TGME49_210678 298 FAALHEK|EQ 0.058 . TGME49_210678 311 SLSQLPR|DM 0.118 . TGME49_210678 326 QSVQASK|LS 0.057 . TGME49_210678 330 ASKLSQR|SS 0.114 . TGME49_210678 334 SQRSSSR|PS 0.096 . TGME49_210678 338 SSRPSAK|LP 0.078 . TGME49_210678 355 PHPQWCR|RF 0.072 . TGME49_210678 356 HPQWCRR|FA 0.274 . TGME49_210678 362 RFAYDFK|TP 0.066 . TGME49_210678 366 DFKTPAK|SL 0.094 . TGME49_210678 386 DAVVVER|HR 0.075 . TGME49_210678 388 VVVERHR|VA 0.089 . TGME49_210678 398 DGNCQFR|SV 0.312 . TGME49_210678 415 DAHAEIR|QE 0.076 . TGME49_210678 423 EVAHYLR|GN 0.090 . TGME49_210678 428 LRGNFNR|LS 0.116 . TGME49_210678 444 LEEDEGR|MA 0.083 . TGME49_210678 447 DEGRMAR|LD 0.245 . TGME49_210678 450 RMARLDK|KY 0.130 . TGME49_210678 451 MARLDKK|YR 0.089 . TGME49_210678 453 RLDKKYR|VR 0.082 . TGME49_210678 455 DKKYRVR|IP 0.084 . TGME49_210678 459 RVRIPYK|TY 0.065 . TGME49_210678 462 IPYKTYK|GY 0.079 . TGME49_210678 472 LAEDELK|LN 0.062 . TGME49_210678 478 KLNWVIR|LG 0.106 . TGME49_210678 483 IRLGDAR|YR 0.100 . TGME49_210678 485 LGDARYR|IW 0.104 . TGME49_210678 503 AEMYNIR|IV 0.120 . TGME49_210678 514 QQEGDGR|RA 0.096 . TGME49_210678 515 QEGDGRR|AT 0.163 . TGME49_210678 518 DGRRATK|MG 0.201 . TGME49_210678 549 LIYDLQR|QH 0.093 . TGME49_210678 557 HYDVVEK|VK 0.058 . TGME49_210678 559 DVVEKVK|PR 0.063 . TGME49_210678 561 VEKVKPR|-- 0.108 . ____________________________^_________________

  • Fasta :-

    >TGME49_210678 CCGCCGACACTGCTCGTAGTCGAAAAACGAAACTCGGGGTTAAATTTGGCAACAGGTACA CGCCATAGCGAACATGGATGATCAATCATTTCTCACCCATTTACAATTAAGCTTACGTCG ACTGTTCCGATAGACGATTGTAAGATCTAAATACATTCAATTATACTGTTTGTTTTCTGC GGCTCTACCATCGTACGATGCATTCAACGAATCATCAAGCCCCCTGGTCTCAGACCAGGA CCCTTGTCTCGAGCCCCTCTAAAATGTCTGTTTCTGCCGTAGAGGGAACTCTTCCCTCGA ACCTCTTTTCTGTCTCGCGGCAGCAGCTTGCTTCGTCGCCGGGTTCCGGCTATCAATACC GTGATTTACTACGCCCTGCAAAAAGGCTTCCGCTACCCCTCTCTCCGCTAGAGCAAACGG CTATGGTGCTCTCAAGTGGATGGCGTGCTCTGATACGCTGTTGTCAGCCGGTGCTCGCGA CCCCTAACGTGAGTGCCTCTGACAAGCAAGAGCTTGCTCCCTCCTTCGTCGGCCGCGTCG ACGAAGAGGAACTAAACTTGGAGTCAGAGACCAAAGTAAACTACCGCGTCCATGCTACAC TGCAAGGAGACATCTGCTGGACACCGAGTACGGCGAGCGAGGAGTTCGACCCGGAGTCCC ACTCTTGCGCTGACGATGCAGTCATTGTTTCGTCATTTGGGATCCGAGTCGACGCCGCGG AACTGGATCTGGACCGAGACGCTGACATCGTCTATGATTCTGCGTACGAAGCAGACAACG AAGAAGACGCGTGGTCAGAAACAGGGTCGGAAGAAGACGCGGACGAATCTCCTAGAAGTA GCGAGGTCTTGACTCAAGCTGACGAAGATGGCCAGAGTTTCGAAGGAGACCTTGCTACTA CGAACTTCGTCGCGTCGACGCAGACAGGCGAAGACTTCTCTGGAGACGAATGGGAAATTC CTGAGGAGATTTCACCAGCAGAGGGGATGACGACGAGGACACCAACACCTCCAGGAGGAT CACCGGGAGATTGCTGCGGAGATGGAAATGAGGAAAAAATCTTCGGTCGATTCGCAGCCC TCCACGAGAAGGAGCAACCCGTGTGTCAATCTCTGAGTCAACTGCCCAGAGACATGCAGG CGCCTCCTTTGGAGCAGTCGGTTCAAGCGTCGAAGTTGTCGCAGCGGTCCTCCAGCCGAC CTTCAGCCAAGCTACCACCGGAAATGTTGCCCTTCATCGCCCCTCATCCGCAATGGTGCC GTCGCTTCGCCTATGACTTCAAAACGCCAGCGAAGAGTCTGTCCATGGTGCCGCAACCCG AGCTGTCATTCTACGACGCGGTGGTTGTGGAGCGGCACCGGGTTGCTCCTGACGGAAATT GTCAATTCCGTTCCGTCAGCTACGCGTTGCTAGGCACAGAGGATGCCCATGCGGAAATCC GGCAAGAGGTGGCGCACTACCTGAGGGGCAACTTTAATCGGCTTAGCTGGCTGATAAACC CGGACACACTGGAGGAAGACGAGGGGAGAATGGCTCGACTCGACAAGAAATACAGAGTCA GAATTCCGTACAAAACCTACAAAGGTTATCCCTTGGCAGAAGACGAGCTCAAACTTAATT GGGTTATCAGGCTTGGAGACGCACGATACAGGATCTGGGGTGACGAGTGCACTCTCGCTG TGATGGCGGAGATGTACAACATCCGGATCGTTGTTGAGCAACAAGAAGGCGACGGGCGTC GGGCAACCAAAATGGGTTCGCATGCAGTCCAGGTTATCATACCATACGATGTGGTTCCTG AGGCATGCATCCCGACGATTTTCCTGATCTACGACCTTCAGCGTCAACACTACGACGTGG TCGAAAAGGTCAAACCCAGGTGA
  • Download Fasta

  • Fasta :-

    MHSTNHQAPWSQTRTLVSSPSKMSVSAVEGTLPSNLFSVSRQQLASSPGSGYQYRDLLRP AKRLPLPLSPLEQTAMVLSSGWRALIRCCQPVLATPNVSASDKQELAPSFVGRVDEEELN LESETKVNYRVHATLQGDICWTPSTASEEFDPESHSCADDAVIVSSFGIRVDAAELDLDR DADIVYDSAYEADNEEDAWSETGSEEDADESPRSSEVLTQADEDGQSFEGDLATTNFVAS TQTGEDFSGDEWEIPEEISPAEGMTTRTPTPPGGSPGDCCGDGNEEKIFGRFAALHEKEQ PVCQSLSQLPRDMQAPPLEQSVQASKLSQRSSSRPSAKLPPEMLPFIAPHPQWCRRFAYD FKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSVSYALLGTEDAHAEIRQEVAH YLRGNFNRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLG DARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPT IFLIYDLQRQHYDVVEKVKPR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_210678204 SSETGSEEDA0.996unspTGME49_210678204 SSETGSEEDA0.996unspTGME49_210678204 SSETGSEEDA0.996unspTGME49_210678211 SDADESPRSS0.996unspTGME49_210678248 SGEDFSGDEW0.992unspTGME49_210678275 SPPGGSPGDC0.993unspTGME49_210678332 SSQRSSSRPS0.99unspTGME49_210678333 SQRSSSRPSA0.995unspTGME49_210678336 SSSRPSAKLP0.997unspTGME49_210678377 SQPELSFYDA0.993unspTGME49_210678147 SPSTASEEFD0.992unspTGME49_210678188 SIVYDSAYEA0.994unsp

TGME49_010680      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India