TGME49_211330 | methionine aminopeptidase

_IDPredictionOTHERSPmTPCS_Position
TGME49_211330OTHER0.9999960.0000040.000000
No Results

  • Fasta :-

    >TGME49_211330 METEGLDEGEMEDGMLLERNDKDPSRVFRRTLPQEKAAIRKLSLVGNTVSVTPGQCRPNS SGSVTGAKPLGDKRNNLRLGGPRREAEKGKTWRRNHAVLAFLILLFMFQTPYYLPSHGLP LDADKRRWASMSALANAPAHSSSLHAPFSSERLSPLASVCASVDRRRSRADFHRQSLSKT GKAPKNKAEPAWCLLSPWTSLASYENPIRQSHKMRGKKRDSGLEFSSWSSAFSRGSVDSF SPSRSSGTTSRSSCRCRRGSTLLLLPVSAAFSPGFAFQFLPLTACDGVSPASQARLPSSV LRASSPAAPSHSSGPSSFFASSRRRPSLFSRSFSALCSSPDVSSDNASSSTDLSFPVLRR IVPGRVSPSLSVGAGIVKPHYAEEDDGRAKAKREAMLSAELQLRRCEGDEMKARLARFHP VAEREMEWIKPQAEVEGVRRACEVTREVLQVAVDFVKGVCAQSSAPLTTEDIDRVVHEET MKRGAYPSPLRYCNFPKSVCTSTNEIVCHGIPDDRPLQRGSICSIDVSCFLDGFHGDCAR TVPIGGFESLSPPLRRLLVSAREATLEGIRVCAPGRRLSVIGDAIEEFLTRRGYSTIHDF CGHGIGRNFHEEPFVLHASNNMPGRMLPGMCFTIEPVVCMGGTDYTTWPDKWTIATTDGK PTAQFEHTVLITDTGVEVLTDCPDGETDMLELAKEVF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_211330.fa Sequence name : TGME49_211330 Sequence length : 697 VALUES OF COMPUTED PARAMETERS Coef20 : 2.585 CoefTot : 0.000 ChDiff : 12 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.924 1.847 0.267 0.741 MesoH : 0.252 0.378 -0.127 0.216 MuHd_075 : 37.780 20.756 8.653 5.320 MuHd_095 : 6.311 5.860 2.419 2.226 MuHd_100 : 7.916 6.830 3.288 2.133 MuHd_105 : 6.853 6.196 3.519 1.431 Hmax_075 : 6.767 6.533 -1.431 3.220 Hmax_095 : -3.150 4.813 -2.117 2.853 Hmax_100 : -4.800 3.600 -2.556 2.620 Hmax_105 : -6.800 4.317 -2.799 2.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9965 0.0035 DFMC : 0.9928 0.0072
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 697 TGME49_211330 METEGLDEGEMEDGMLLERNDKDPSRVFRRTLPQEKAAIRKLSLVGNTVSVTPGQCRPNSSGSVTGAKPLGDKRNNLRLG 80 GPRREAEKGKTWRRNHAVLAFLILLFMFQTPYYLPSHGLPLDADKRRWASMSALANAPAHSSSLHAPFSSERLSPLASVC 160 ASVDRRRSRADFHRQSLSKTGKAPKNKAEPAWCLLSPWTSLASYENPIRQSHKMRGKKRDSGLEFSSWSSAFSRGSVDSF 240 SPSRSSGTTSRSSCRCRRGSTLLLLPVSAAFSPGFAFQFLPLTACDGVSPASQARLPSSVLRASSPAAPSHSSGPSSFFA 320 SSRRRPSLFSRSFSALCSSPDVSSDNASSSTDLSFPVLRRIVPGRVSPSLSVGAGIVKPHYAEEDDGRAKAKREAMLSAE 400 LQLRRCEGDEMKARLARFHPVAEREMEWIKPQAEVEGVRRACEVTREVLQVAVDFVKGVCAQSSAPLTTEDIDRVVHEET 480 MKRGAYPSPLRYCNFPKSVCTSTNEIVCHGIPDDRPLQRGSICSIDVSCFLDGFHGDCARTVPIGGFESLSPPLRRLLVS 560 AREATLEGIRVCAPGRRLSVIGDAIEEFLTRRGYSTIHDFCGHGIGRNFHEEPFVLHASNNMPGRMLPGMCFTIEPVVCM 640 GGTDYTTWPDKWTIATTDGKPTAQFEHTVLITDTGVEVLTDCPDGETDMLELAKEVF 720 ............................P................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_211330 19 DGMLLER|ND 0.064 . TGME49_211330 22 LLERNDK|DP 0.148 . TGME49_211330 26 NDKDPSR|VF 0.097 . TGME49_211330 29 DPSRVFR|RT 0.530 *ProP* TGME49_211330 30 PSRVFRR|TL 0.210 . TGME49_211330 36 RTLPQEK|AA 0.067 . TGME49_211330 40 QEKAAIR|KL 0.108 . TGME49_211330 41 EKAAIRK|LS 0.080 . TGME49_211330 57 VTPGQCR|PN 0.090 . TGME49_211330 68 GSVTGAK|PL 0.088 . TGME49_211330 73 AKPLGDK|RN 0.056 . TGME49_211330 74 KPLGDKR|NN 0.112 . TGME49_211330 78 DKRNNLR|LG 0.093 . TGME49_211330 83 LRLGGPR|RE 0.084 . TGME49_211330 84 RLGGPRR|EA 0.306 . TGME49_211330 88 PRREAEK|GK 0.071 . TGME49_211330 90 REAEKGK|TW 0.075 . TGME49_211330 93 EKGKTWR|RN 0.130 . TGME49_211330 94 KGKTWRR|NH 0.095 . TGME49_211330 125 LPLDADK|RR 0.060 . TGME49_211330 126 PLDADKR|RW 0.098 . TGME49_211330 127 LDADKRR|WA 0.289 . TGME49_211330 152 APFSSER|LS 0.069 . TGME49_211330 165 VCASVDR|RR 0.084 . TGME49_211330 166 CASVDRR|RS 0.153 . TGME49_211330 167 ASVDRRR|SR 0.191 . TGME49_211330 169 VDRRRSR|AD 0.261 . TGME49_211330 174 SRADFHR|QS 0.113 . TGME49_211330 179 HRQSLSK|TG 0.061 . TGME49_211330 182 SLSKTGK|AP 0.070 . TGME49_211330 185 KTGKAPK|NK 0.057 . TGME49_211330 187 GKAPKNK|AE 0.065 . TGME49_211330 209 SYENPIR|QS 0.090 . TGME49_211330 213 PIRQSHK|MR 0.096 . TGME49_211330 215 RQSHKMR|GK 0.134 . TGME49_211330 217 SHKMRGK|KR 0.071 . TGME49_211330 218 HKMRGKK|RD 0.380 . TGME49_211330 219 KMRGKKR|DS 0.475 . TGME49_211330 234 WSSAFSR|GS 0.141 . TGME49_211330 244 DSFSPSR|SS 0.132 . TGME49_211330 251 SSGTTSR|SS 0.171 . TGME49_211330 255 TSRSSCR|CR 0.102 . TGME49_211330 257 RSSCRCR|RG 0.116 . TGME49_211330 258 SSCRCRR|GS 0.426 . TGME49_211330 295 SPASQAR|LP 0.132 . TGME49_211330 302 LPSSVLR|AS 0.176 . TGME49_211330 323 SFFASSR|RR 0.071 . TGME49_211330 324 FFASSRR|RP 0.095 . TGME49_211330 325 FASSRRR|PS 0.132 . TGME49_211330 331 RPSLFSR|SF 0.232 . TGME49_211330 359 LSFPVLR|RI 0.102 . TGME49_211330 360 SFPVLRR|IV 0.140 . TGME49_211330 365 RRIVPGR|VS 0.087 . TGME49_211330 378 VGAGIVK|PH 0.068 . TGME49_211330 388 AEEDDGR|AK 0.102 . TGME49_211330 390 EDDGRAK|AK 0.065 . TGME49_211330 392 DGRAKAK|RE 0.063 . TGME49_211330 393 GRAKAKR|EA 0.358 . TGME49_211330 404 SAELQLR|RC 0.089 . TGME49_211330 405 AELQLRR|CE 0.131 . TGME49_211330 412 CEGDEMK|AR 0.058 . TGME49_211330 414 GDEMKAR|LA 0.114 . TGME49_211330 417 MKARLAR|FH 0.449 . TGME49_211330 424 FHPVAER|EM 0.091 . TGME49_211330 430 REMEWIK|PQ 0.065 . TGME49_211330 439 AEVEGVR|RA 0.087 . TGME49_211330 440 EVEGVRR|AC 0.126 . TGME49_211330 446 RACEVTR|EV 0.139 . TGME49_211330 457 VAVDFVK|GV 0.091 . TGME49_211330 474 TTEDIDR|VV 0.115 . TGME49_211330 482 VHEETMK|RG 0.052 . TGME49_211330 483 HEETMKR|GA 0.211 . TGME49_211330 491 AYPSPLR|YC 0.064 . TGME49_211330 497 RYCNFPK|SV 0.169 . TGME49_211330 515 HGIPDDR|PL 0.077 . TGME49_211330 519 DDRPLQR|GS 0.114 . TGME49_211330 540 FHGDCAR|TV 0.133 . TGME49_211330 555 SLSPPLR|RL 0.087 . TGME49_211330 556 LSPPLRR|LL 0.125 . TGME49_211330 562 RLLVSAR|EA 0.108 . TGME49_211330 570 ATLEGIR|VC 0.068 . TGME49_211330 576 RVCAPGR|RL 0.108 . TGME49_211330 577 VCAPGRR|LS 0.107 . TGME49_211330 591 IEEFLTR|RG 0.079 . TGME49_211330 592 EEFLTRR|GY 0.150 . TGME49_211330 607 CGHGIGR|NF 0.097 . TGME49_211330 625 SNNMPGR|ML 0.142 . TGME49_211330 651 YTTWPDK|WT 0.066 . TGME49_211330 660 IATTDGK|PT 0.073 . TGME49_211330 694 DMLELAK|EV 0.074 . ____________________________^_________________

  • Fasta :-

    >TGME49_211330 CTCGTCTTTCGCATGTTCTGGCGGCCTTTTTTCTTCCGGCGTTTCCCTCGATTTCTCGCG GTTCCCTCCACGTCCACGCAGATTTCGATGTTTCGCTGACCCCTGCTCTTGCTGCGTCTC GCCTCCTGTCTCGTCTCCGTTCCTTCCGACGATCTTTCCCCCTTCTTCTCTCGTTATTTC CTGCATTCGTCTCTAGGTGTTTTTCTTCGTTTCTCTTTACCCCGTCTTTCTGCCTAGGCG CATTGCCTGAGACTTGTTTCCACTCCTCGACCCGCATGTCAAGTCCGCGTTGATTCGGCA GTCGCCGTCCCTACAGAAGGATGGAAACAGAAGGCTTAGACGAGGGAGAGATGGAGGACG GAATGCTGTTAGAGCGAAACGATAAAGATCCATCTCGAGTCTTCCGAAGAACGCTTCCAC AGGAGAAAGCTGCGATACGGAAGTTGTCATTAGTAGGCAACACTGTATCCGTCACTCCAG GGCAATGTCGACCGAATTCCTCAGGATCAGTAACAGGAGCAAAACCACTCGGAGACAAGC GGAACAACCTCCGGCTTGGTGGGCCGCGTCGTGAGGCAGAGAAAGGCAAAACTTGGAGAC GAAATCACGCTGTTCTCGCCTTCCTGATCCTTTTGTTTATGTTTCAAACTCCCTACTACC TACCTTCGCACGGCCTTCCTCTCGACGCTGACAAGCGACGATGGGCTTCTATGTCTGCTC TAGCAAATGCGCCAGCACATTCTTCCTCACTGCATGCACCCTTTTCTTCCGAACGCCTTT CGCCTCTCGCCTCTGTCTGTGCCTCTGTGGACAGACGCCGCTCCCGCGCCGACTTCCATC GGCAGAGTCTCTCTAAGACTGGCAAGGCTCCGAAAAACAAAGCTGAACCTGCTTGGTGTC TCCTCTCCCCCTGGACTTCCCTCGCCTCTTACGAAAACCCCATAAGACAGTCGCACAAAA TGAGAGGAAAAAAACGCGATTCTGGCCTCGAATTCTCTTCTTGGTCTTCTGCTTTTTCAC GAGGCTCGGTCGATAGTTTCTCTCCCTCACGTTCTTCGGGGACTACCTCTCGGTCGTCTT GTCGTTGCCGACGAGGTTCCACCCTTTTGCTCCTTCCTGTCTCTGCTGCTTTCTCGCCTG GATTTGCTTTCCAGTTCCTCCCATTGACCGCATGCGATGGCGTCTCTCCTGCATCGCAGG CGCGGTTGCCATCGTCGGTTCTTCGTGCTTCTTCGCCTGCGGCGCCCTCTCACTCCTCTG GGCCTTCGTCCTTCTTCGCTTCTTCCCGGCGTCGTCCGTCTTTGTTCTCCAGGTCCTTCT CAGCTCTCTGTTCGTCTCCTGATGTGTCTTCTGACAACGCTTCCTCCTCGACGGATCTGT CGTTTCCAGTGCTACGCCGCATAGTGCCTGGCCGTGTATCGCCTTCGCTCTCAGTGGGTG CCGGCATCGTCAAGCCCCACTATGCTGAGGAAGACGACGGCCGAGCGAAAGCCAAAAGGG AAGCGATGCTGAGTGCAGAACTCCAGCTGAGACGCTGCGAAGGTGACGAAATGAAGGCTA GACTCGCGCGTTTCCACCCTGTCGCAGAAAGGGAGATGGAGTGGATAAAGCCTCAGGCAG AAGTAGAAGGTGTCCGGCGCGCATGCGAGGTGACCAGGGAAGTTCTGCAGGTCGCCGTGG ATTTTGTGAAGGGCGTTTGTGCGCAGTCTTCCGCCCCTTTGACAACGGAAGATATTGATC GAGTTGTGCACGAAGAAACGATGAAACGCGGCGCGTACCCGTCTCCCCTGCGGTACTGCA ATTTCCCCAAGAGTGTCTGTACCTCGACAAATGAAATCGTTTGCCACGGTATTCCTGACG ACAGGCCGCTTCAACGGGGGAGCATCTGCAGCATCGACGTCTCCTGCTTTCTCGATGGCT TTCATGGAGACTGTGCGCGAACAGTTCCCATTGGAGGTTTCGAGTCTCTCTCGCCACCGC TTCGCCGCTTGCTCGTCTCTGCTCGAGAAGCCACGCTGGAAGGCATTCGCGTCTGTGCAC CAGGCAGACGGCTCAGTGTGATCGGCGATGCAATTGAAGAGTTCCTGACGCGCAGGGGCT ACAGCACTATTCATGATTTCTGTGGACACGGCATCGGCCGAAATTTTCACGAGGAACCTT TTGTTCTTCATGCCTCAAACAACATGCCTGGGCGGATGCTGCCGGGGATGTGCTTTACCA TCGAACCAGTCGTCTGCATGGGTGGAACAGATTACACCACGTGGCCCGACAAATGGACGA TCGCGACCACTGACGGAAAACCGACAGCCCAATTCGAGCACACGGTTCTCATTACCGACA CCGGTGTCGAAGTGCTGACGGACTGTCCAGACGGAGAGACAGACATGCTGGAGCTCGCCA AGGAAGTGTTCTGACCGCTGGCACTCTCGACGTACTTGAAATAATTCCAAAGCGATGCGA CCATCTTCGATGAACACGTCACTTATGGGGAGGGCTATTGCGGAGTTCCCGAAGTGGGGC ATGTGTCGCTGTGAAGCTGTTGTAGCGAGTGCCCTGCCAAAGGCGAAGCGTTTATGTCAC TGCATCTCTGTTTTTTGACATGTCCTGACCCCAAGCGCAAAAGTGCTTGTGCGGTGAGTA GCGGCGCACATGTCAGTTTCGTGTCATAGACACACGGCCACATACGGTGCTAGCTAGAGG TGGAGAGTTCTTTTCTCCTGTTAGTGGCAAACAGGTGATGTCGCCTAATCTTCCATGAGA GCCATCAGTGGAGTAAATCGACGCCAAAGCGACAATGCTACCGCAACGGTTCTCTGCATG TCGCTATTGAGCGTAACTGGGAAAAGTGTGACTGTATCCACGAGGAACTTCATCGTGACG GGCCTGTCTGTGGATTTCACAGTCTCGACATTGTGTGATGTGTGAACATTCTTTAGCGCA C
  • Download Fasta

  • Fasta :-

    METEGLDEGEMEDGMLLERNDKDPSRVFRRTLPQEKAAIRKLSLVGNTVSVTPGQCRPNS SGSVTGAKPLGDKRNNLRLGGPRREAEKGKTWRRNHAVLAFLILLFMFQTPYYLPSHGLP LDADKRRWASMSALANAPAHSSSLHAPFSSERLSPLASVCASVDRRRSRADFHRQSLSKT GKAPKNKAEPAWCLLSPWTSLASYENPIRQSHKMRGKKRDSGLEFSSWSSAFSRGSVDSF SPSRSSGTTSRSSCRCRRGSTLLLLPVSAAFSPGFAFQFLPLTACDGVSPASQARLPSSV LRASSPAAPSHSSGPSSFFASSRRRPSLFSRSFSALCSSPDVSSDNASSSTDLSFPVLRR IVPGRVSPSLSVGAGIVKPHYAEEDDGRAKAKREAMLSAELQLRRCEGDEMKARLARFHP VAEREMEWIKPQAEVEGVRRACEVTREVLQVAVDFVKGVCAQSSAPLTTEDIDRVVHEET MKRGAYPSPLRYCNFPKSVCTSTNEIVCHGIPDDRPLQRGSICSIDVSCFLDGFHGDCAR TVPIGGFESLSPPLRRLLVSAREATLEGIRVCAPGRRLSVIGDAIEEFLTRRGYSTIHDF CGHGIGRNFHEEPFVLHASNNMPGRMLPGMCFTIEPVVCMGGTDYTTWPDKWTIATTDGK PTAQFEHTVLITDTGVEVLTDCPDGETDMLELAKEVF

  • title: active site
  • coordinates: H509,D526,D537,H603,E635,E666
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_211330221 SKKRDSGLEF0.997unspTGME49_211330221 SKKRDSGLEF0.997unspTGME49_211330221 SKKRDSGLEF0.997unspTGME49_211330241 SVDSFSPSRS0.996unspTGME49_211330246 SPSRSSGTTS0.995unspTGME49_211330253 STSRSSCRCR0.997unspTGME49_211330327 SRRRPSLFSR0.991unspTGME49_211330349 SDNASSSTDL0.993unspTGME49_211330560 SRLLVSAREA0.992unspTGME49_211330579 SGRRLSVIGD0.995unspTGME49_211330154 SSERLSPLAS0.996unspTGME49_211330168 SDRRRSRADF0.998unsp

TGME49_011330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India