TGME49_216020 | peptidase family c78 protein

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_IDPredictionOTHERSPmTPCS_Position
TGME49_216020OTHER0.8827820.0338620.083356
No Results

  • Fasta :-

    >TGME49_216020 MATARSPAIRIDWKLAAFLRHLRSQLILRRDSLSSPFLAVLVGVPLSSASPASLLLSSFR LLHAERDPTLAQLFTASTPSVSSSLREALRRDLATITFILPDGLRILGLLAFSPADGPAV SAVYPSVSAVAEAISTQLAFLAQKELSSLSEDAGVAASHRLSFVCSLSSDAEKTTGASVF PWTFVSLLPSLSSSSPSSSSSPSTVEESAGARLTVSVEDGSSLLRSERFLFLRSRLALSL RLETPFLVTLSRGLGDARHGATDAVSSLEAERELAAGEDRADFLPCLPSTTATELLAALR EQEAALAAPLGLFFCMPNGVYVHPTDGVEAASARLEKSPSRLGGCDTSVWTAVAPAASKA KHVVVGEAKIADEDAERNNTEGRLQTAFSTHAVLDLPWLQQASQGATQDGRLPLASLSAI SIPAFLSSLSSASESPHGWAYTPECGAAQVSLRYIQVFLDSCILVPGTASLASCANRFLR AFRRQLRHAALQILHSSSSSSSSSSCSVQNILTTSLTAALMSSGDFAASSASAASACAPS PPLFPRVLCFDASRCRVPREEQPASLSFAFHSVKLPWCLHPLLSWNNEAQVARRHWLSLL GVLKDLPAFRLSAALPWNETQAERGRGAHKLVNPHRSLVTGPKWLPQTRAVTCLVQGDFA YYHYCQDNERDEGWGCCYRSLQLVISWFQRQHFTTKPVPSIADIQRLLKKFDLAHENLEI GSKAWIGTVEGSYVLNWYLHVPSKLLHLTSASDLPSHAATLKEHFDSVGSPVMMGVGDYA YTMVGISVDSETGEAAFLIVDPHYAGDDGDIDKILDKNWIGWKKTNFFEKTAGTKFINLA LPQICTEGGDLFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_216020.fa Sequence name : TGME49_216020 Sequence length : 853 VALUES OF COMPUTED PARAMETERS Coef20 : 4.971 CoefTot : 2.670 ChDiff : -7 ZoneTo : 64 KR : 8 DE : 2 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.724 1.694 0.300 0.632 MesoH : 0.389 0.778 -0.071 0.341 MuHd_075 : 39.096 25.947 9.634 9.935 MuHd_095 : 26.169 24.259 7.868 6.398 MuHd_100 : 24.080 22.571 7.553 6.970 MuHd_105 : 34.726 25.508 9.336 9.362 Hmax_075 : 18.550 13.400 0.583 3.840 Hmax_095 : 16.600 19.687 3.083 6.640 Hmax_100 : 16.600 19.000 2.076 6.150 Hmax_105 : 12.833 17.000 1.231 5.857 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0517 0.9483 DFMC : 0.0316 0.9684 This protein is probably imported in mitochondria. f(Ser) = 0.1719 f(Arg) = 0.1094 CMi = 0.77031 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 853 TGME49_216020 MATARSPAIRIDWKLAAFLRHLRSQLILRRDSLSSPFLAVLVGVPLSSASPASLLLSSFRLLHAERDPTLAQLFTASTPS 80 VSSSLREALRRDLATITFILPDGLRILGLLAFSPADGPAVSAVYPSVSAVAEAISTQLAFLAQKELSSLSEDAGVAASHR 160 LSFVCSLSSDAEKTTGASVFPWTFVSLLPSLSSSSPSSSSSPSTVEESAGARLTVSVEDGSSLLRSERFLFLRSRLALSL 240 RLETPFLVTLSRGLGDARHGATDAVSSLEAERELAAGEDRADFLPCLPSTTATELLAALREQEAALAAPLGLFFCMPNGV 320 YVHPTDGVEAASARLEKSPSRLGGCDTSVWTAVAPAASKAKHVVVGEAKIADEDAERNNTEGRLQTAFSTHAVLDLPWLQ 400 QASQGATQDGRLPLASLSAISIPAFLSSLSSASESPHGWAYTPECGAAQVSLRYIQVFLDSCILVPGTASLASCANRFLR 480 AFRRQLRHAALQILHSSSSSSSSSSCSVQNILTTSLTAALMSSGDFAASSASAASACAPSPPLFPRVLCFDASRCRVPRE 560 EQPASLSFAFHSVKLPWCLHPLLSWNNEAQVARRHWLSLLGVLKDLPAFRLSAALPWNETQAERGRGAHKLVNPHRSLVT 640 GPKWLPQTRAVTCLVQGDFAYYHYCQDNERDEGWGCCYRSLQLVISWFQRQHFTTKPVPSIADIQRLLKKFDLAHENLEI 720 GSKAWIGTVEGSYVLNWYLHVPSKLLHLTSASDLPSHAATLKEHFDSVGSPVMMGVGDYAYTMVGISVDSETGEAAFLIV 800 DPHYAGDDGDIDKILDKNWIGWKKTNFFEKTAGTKFINLALPQICTEGGDLFV 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ..................................................... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_216020 5 --MATAR|SP 0.125 . TGME49_216020 10 ARSPAIR|ID 0.115 . TGME49_216020 14 AIRIDWK|LA 0.063 . TGME49_216020 20 KLAAFLR|HL 0.115 . TGME49_216020 23 AFLRHLR|SQ 0.201 . TGME49_216020 29 RSQLILR|RD 0.076 . TGME49_216020 30 SQLILRR|DS 0.114 . TGME49_216020 60 LLLSSFR|LL 0.095 . TGME49_216020 66 RLLHAER|DP 0.085 . TGME49_216020 86 SVSSSLR|EA 0.091 . TGME49_216020 90 SLREALR|RD 0.077 . TGME49_216020 91 LREALRR|DL 0.239 . TGME49_216020 105 ILPDGLR|IL 0.074 . TGME49_216020 144 LAFLAQK|EL 0.059 . TGME49_216020 160 GVAASHR|LS 0.080 . TGME49_216020 173 LSSDAEK|TT 0.089 . TGME49_216020 212 EESAGAR|LT 0.106 . TGME49_216020 225 DGSSLLR|SE 0.087 . TGME49_216020 228 SLLRSER|FL 0.159 . TGME49_216020 233 ERFLFLR|SR 0.091 . TGME49_216020 235 FLFLRSR|LA 0.073 . TGME49_216020 241 RLALSLR|LE 0.087 . TGME49_216020 252 FLVTLSR|GL 0.155 . TGME49_216020 258 RGLGDAR|HG 0.075 . TGME49_216020 272 SSLEAER|EL 0.096 . TGME49_216020 280 LAAGEDR|AD 0.068 . TGME49_216020 300 ELLAALR|EQ 0.087 . TGME49_216020 334 VEAASAR|LE 0.071 . TGME49_216020 337 ASARLEK|SP 0.230 . TGME49_216020 341 LEKSPSR|LG 0.076 . TGME49_216020 359 VAPAASK|AK 0.060 . TGME49_216020 361 PAASKAK|HV 0.114 . TGME49_216020 369 VVVGEAK|IA 0.064 . TGME49_216020 377 ADEDAER|NN 0.082 . TGME49_216020 383 RNNTEGR|LQ 0.091 . TGME49_216020 411 GATQDGR|LP 0.076 . TGME49_216020 453 AAQVSLR|YI 0.123 . TGME49_216020 477 LASCANR|FL 0.155 . TGME49_216020 480 CANRFLR|AF 0.399 . TGME49_216020 483 RFLRAFR|RQ 0.140 . TGME49_216020 484 FLRAFRR|QL 0.178 . TGME49_216020 487 AFRRQLR|HA 0.274 . TGME49_216020 546 SPPLFPR|VL 0.088 . TGME49_216020 554 LCFDASR|CR 0.075 . TGME49_216020 556 FDASRCR|VP 0.083 . TGME49_216020 559 SRCRVPR|EE 0.313 . TGME49_216020 574 FAFHSVK|LP 0.056 . TGME49_216020 593 NEAQVAR|RH 0.093 . TGME49_216020 594 EAQVARR|HW 0.136 . TGME49_216020 604 SLLGVLK|DL 0.068 . TGME49_216020 610 KDLPAFR|LS 0.075 . TGME49_216020 624 NETQAER|GR 0.083 . TGME49_216020 626 TQAERGR|GA 0.159 . TGME49_216020 630 RGRGAHK|LV 0.080 . TGME49_216020 636 KLVNPHR|SL 0.182 . TGME49_216020 643 SLVTGPK|WL 0.066 . TGME49_216020 649 KWLPQTR|AV 0.118 . TGME49_216020 670 YCQDNER|DE 0.105 . TGME49_216020 679 GWGCCYR|SL 0.131 . TGME49_216020 690 VISWFQR|QH 0.106 . TGME49_216020 696 RQHFTTK|PV 0.084 . TGME49_216020 706 SIADIQR|LL 0.088 . TGME49_216020 709 DIQRLLK|KF 0.095 . TGME49_216020 710 IQRLLKK|FD 0.121 . TGME49_216020 723 NLEIGSK|AW 0.063 . TGME49_216020 744 YLHVPSK|LL 0.061 . TGME49_216020 762 SHAATLK|EH 0.074 . TGME49_216020 813 DDGDIDK|IL 0.065 . TGME49_216020 817 IDKILDK|NW 0.062 . TGME49_216020 823 KNWIGWK|KT 0.065 . TGME49_216020 824 NWIGWKK|TN 0.089 . TGME49_216020 830 KTNFFEK|TA 0.108 . TGME49_216020 835 EKTAGTK|FI 0.075 . ____________________________^_________________

  • Fasta :-

    >TGME49_216020 CAAACAACGAAGATCCGCGGACGGCGAGACGTCGTGACTGCTCCGTCAAGAGCACCTTTG CGGCTACCAGCCCCCCTCTCACACCAGCTGTTCTGTCTCGTCCTGTTTTCTAATTTCGCG TGCCAACAAACGATTTGGCCATATGTTTTTCACCTTCTCCTCGAGATTCGATTCCTTTTT TCTCTCCTAAGAATCCTCAAGCGCCTCTCTCCAGCCTCTCCAGCCGGGGGCCCTCCGGTC AGGTCCCGCTGTGCTGCTCGACGTCGCCTCGTTTCCTTCTGTCTCCTTCCCGCTCGCTTT TTTCTTCTCTTCTGCGGCATCGCAGGTTTTCCAGCTTCACTCTCTTCCTAGTTGCCTCTC TCTTCATGGTTTTCGTCCTCCGTCTCCTCCCTAGTTCCTCTGCCTTTTTCTCTCGCTCTT GCCGTCTCTTTTCCTCGCCGCGCGTCCACCTCCACTTGGCCAGCTCTGTTTTCTTCCCTG CCAACTCCTCTGCAGACCCGTTCTCTCTGTACCTCTGAGCTGTCGACCTCGTTCCGCCGC TCTCCATCTTCTCCCTCGGTTCCTCTCGCCTCCTTGCGTAGAGCAACCTCCCGTTGTCTT CTGAAGAGTCTTTTTTCCGCTGCTCTTTCCCCTCCGTCCCCCTCCTCCTCTCCCCCCTGC ACACAAATGGCGACTGCGCGTTCGCCCGCTATTCGGATCGACTGGAAGCTCGCGGCCTTC CTCCGCCACCTGCGCTCGCAGTTAATTCTCCGCAGAGACTCGCTGAGCTCTCCTTTCCTG GCCGTCCTCGTCGGCGTTCCTCTCTCCTCTGCTTCTCCGGCGTCTCTGCTGCTCTCTTCT TTCCGCTTGCTGCATGCAGAGCGCGACCCCACACTGGCGCAGCTCTTCACTGCCTCGACT CCAAGTGTCTCCTCATCCCTCCGCGAGGCTCTGCGGCGAGACTTGGCGACGATCACCTTC ATCCTTCCGGACGGCCTGCGCATTCTTGGCCTTCTCGCCTTCTCGCCTGCAGACGGTCCC GCTGTCTCTGCCGTGTATCCTAGTGTCTCCGCCGTCGCGGAGGCGATCTCCACTCAACTT GCGTTTCTAGCTCAAAAGGAGCTTTCCTCTCTTTCAGAGGACGCAGGAGTCGCTGCGTCT CATCGACTCTCCTTCGTCTGTTCCCTCTCCAGTGATGCCGAGAAAACCACTGGCGCTTCA GTCTTCCCCTGGACCTTCGTCTCCCTCCTTCCTTCTCTCTCTTCGTCGAGTCCTTCTTCT TCCTCGTCTCCGTCTACTGTGGAGGAGAGCGCAGGCGCTCGGTTGACCGTCTCCGTGGAG GACGGGAGCTCCCTGTTGAGGTCGGAGAGGTTCCTTTTTCTGCGGTCTCGGCTCGCGCTG TCACTGCGCCTCGAGACGCCTTTCTTGGTGACTCTGTCGCGGGGCCTCGGCGACGCTCGC CACGGAGCGACGGACGCAGTCTCCTCTCTGGAAGCAGAGAGAGAACTCGCAGCTGGCGAG GACCGCGCAGACTTTCTCCCGTGTCTGCCGTCGACGACTGCGACCGAACTCCTCGCTGCA CTCCGCGAGCAAGAAGCCGCCCTCGCCGCCCCCCTCGGCCTCTTCTTCTGCATGCCCAAC GGAGTGTACGTCCACCCGACGGACGGAGTGGAGGCCGCCAGCGCTCGCCTCGAGAAGAGT CCCTCTCGGCTCGGAGGCTGCGACACCAGCGTCTGGACAGCCGTCGCGCCTGCGGCCTCG AAGGCGAAGCATGTCGTCGTTGGAGAGGCCAAGATCGCGGACGAGGATGCAGAAAGAAAC AACACAGAAGGTCGCTTGCAAACAGCCTTCTCGACTCACGCAGTTCTGGACCTTCCCTGG CTCCAACAAGCCTCGCAGGGCGCGACGCAGGACGGACGCCTTCCTCTCGCGTCTCTGTCG GCGATTTCCATCCCTGCTTTCCTCTCTTCTCTCTCCAGCGCCTCGGAGTCCCCGCATGGC TGGGCCTACACCCCAGAGTGCGGCGCAGCTCAAGTTTCTCTGCGCTACATCCAGGTCTTC CTCGACAGCTGCATCCTCGTTCCAGGAACCGCTTCACTCGCCTCCTGTGCGAACCGCTTC CTCCGCGCCTTCCGGCGCCAACTCAGACACGCTGCTCTCCAAATTCTCCACTCTTCTTCC TCTTCTTCCTCTTCTTCCTCTTGTTCTGTGCAGAACATCTTGACGACATCCCTGACTGCT GCTTTGATGAGCAGCGGCGACTTCGCTGCTTCCTCGGCGTCCGCGGCTTCTGCCTGCGCG CCCTCTCCTCCGCTGTTCCCGCGAGTGCTTTGCTTCGACGCTTCGCGCTGTCGAGTTCCC AGGGAGGAGCAGCCTGCAAGTCTCTCCTTCGCCTTCCACTCGGTCAAATTGCCTTGGTGT CTCCACCCGCTGCTCTCGTGGAACAACGAGGCGCAGGTCGCGCGGCGCCACTGGCTGTCC CTTCTCGGCGTTTTGAAGGACCTCCCTGCTTTCCGACTGTCTGCTGCTCTGCCGTGGAAC GAAACGCAGGCAGAGCGCGGCAGAGGCGCCCACAAACTTGTGAATCCTCACAGATCTCTA GTCACAGGACCTAAGTGGCTCCCGCAGACGCGCGCCGTCACCTGCCTCGTGCAGGGAGAC TTCGCGTACTACCATTACTGTCAGGACAACGAGCGCGACGAGGGCTGGGGCTGCTGCTAT CGTTCCCTTCAGCTCGTCATCAGTTGGTTTCAGCGTCAGCACTTCACCACGAAACCGGTG CCGTCGATCGCCGACATCCAGCGCCTGCTCAAAAAATTTGACTTGGCTCACGAAAATCTC GAAATAGGCTCCAAGGCATGGATTGGAACAGTGGAGGGGAGTTACGTTTTAAATTGGTAT CTGCATGTCCCGAGCAAGCTGCTGCATCTGACGAGCGCAAGCGACCTGCCGTCTCACGCG GCGACTCTCAAGGAGCACTTTGACTCGGTCGGCTCCCCTGTGATGATGGGCGTCGGCGAC TACGCGTATACCATGGTTGGAATTTCTGTCGATTCGGAAACAGGCGAGGCGGCGTTCCTC ATCGTGGACCCGCACTATGCGGGCGACGACGGAGACATCGACAAGATCCTCGACAAGAAT TGGATTGGCTGGAAGAAGACGAACTTCTTCGAGAAGACAGCAGGGACGAAGTTCATCAAC CTTGCGCTGCCGCAGATCTGCACAGAGGGCGGGGATCTCTTTGTGTAGAAAGCATGTGAA AAGGAAACTTGGAAAGGAAGCGGAGAGCGGAAGCCAACGCAGAAAAGAGACATTTGTCTT TGTCGCCTTTACGTTTAACATACTTTTTTTCCGACATGCGTAAATGAGGTTCTTTCAACT CTTCTCGACGTCTTCCTCCTCAAAGCAGAGACGCAAGCGAGCATTTTGTTAAATTTCAAT AAAATAGGGACAACGTTTCTGCTTCATCCAGAGGAACACCGCGACGGCGATCGCGGTTTG CCTTTTCTCGCCAGAAAGATTTGTTTGTAAAAAAACGTAATGCCGAGAAAGCGAAAGCAT ACAAATACAAAAGAAGAAAACCATGCTGCACGCTCTTTTCTTTCTTTTCGGAGTCTCTCC TTGATCGCGAAAAAGAAGTCGAGACTCATCACCTCCTTCGAAAAACTCACGATCCTCTCT GTTCTCAGACGGCAGTGTCTTCAGAGCTTGCATGTCTCCTCCCCTTTGTTCTTGCTTCTC TGCGTTTCTCCCTTCTGTCAATTCTCCGTCACTCCTTTCTTTCTTCTTTCCCCTTCCTTC GTCTTTGCACAAGATGTCTTGGAGAGGCGTATGTACGCGCTGTCTAAAGTTTCTTCAGTT GCATGCACGGAAAACAAAGCAGTGATCCTTTTTAGCAGAGCGACGGACCTTACTGGCGAA GTAACTGCGCGCGCCCAAGAACTCCAGTTATGAGATAAAAATAACCGCG
  • Download Fasta

  • Fasta :-

    MATARSPAIRIDWKLAAFLRHLRSQLILRRDSLSSPFLAVLVGVPLSSASPASLLLSSFR LLHAERDPTLAQLFTASTPSVSSSLREALRRDLATITFILPDGLRILGLLAFSPADGPAV SAVYPSVSAVAEAISTQLAFLAQKELSSLSEDAGVAASHRLSFVCSLSSDAEKTTGASVF PWTFVSLLPSLSSSSPSSSSSPSTVEESAGARLTVSVEDGSSLLRSERFLFLRSRLALSL RLETPFLVTLSRGLGDARHGATDAVSSLEAERELAAGEDRADFLPCLPSTTATELLAALR EQEAALAAPLGLFFCMPNGVYVHPTDGVEAASARLEKSPSRLGGCDTSVWTAVAPAASKA KHVVVGEAKIADEDAERNNTEGRLQTAFSTHAVLDLPWLQQASQGATQDGRLPLASLSAI SIPAFLSSLSSASESPHGWAYTPECGAAQVSLRYIQVFLDSCILVPGTASLASCANRFLR AFRRQLRHAALQILHSSSSSSSSSSCSVQNILTTSLTAALMSSGDFAASSASAASACAPS PPLFPRVLCFDASRCRVPREEQPASLSFAFHSVKLPWCLHPLLSWNNEAQVARRHWLSLL GVLKDLPAFRLSAALPWNETQAERGRGAHKLVNPHRSLVTGPKWLPQTRAVTCLVQGDFA YYHYCQDNERDEGWGCCYRSLQLVISWFQRQHFTTKPVPSIADIQRLLKKFDLAHENLEI GSKAWIGTVEGSYVLNWYLHVPSKLLHLTSASDLPSHAATLKEHFDSVGSPVMMGVGDYA YTMVGISVDSETGEAAFLIVDPHYAGDDGDIDKILDKNWIGWKKTNFFEKTAGTKFINLA LPQICTEGGDLFV

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_216020113 SLLAFSPADG0.995unspTGME49_216020113 SLLAFSPADG0.995unspTGME49_216020113 SLLAFSPADG0.995unspTGME49_216020195 SLSSSSPSSS0.994unspTGME49_216020197 SSSSPSSSSS0.991unspTGME49_216020198 SSSPSSSSSP0.991unspTGME49_216020203 SSSSPSTVEE0.995unspTGME49_216020216 SRLTVSVEDG0.997unspTGME49_216020267 SDAVSSLEAE0.99unspTGME49_216020501 SSSSSSSSSS0.991unspTGME49_216020503 SSSSSSSSCS0.991unspTGME49_21602032 SLRRDSLSSP0.997unspTGME49_21602084 SSVSSSLREA0.995unsp

TGME49_016020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India