TGME49_216440 | OTU family cysteine protease

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_216440OTHER0.9601480.0000120.039840
No Results

  • Fasta :-

    >TGME49_216440 MLAAKRVAVTPRRPAPSPFRTGAEREARRKNEMDLQKEDKSAEYRRKRELRARKRRRRKR SDMFGDIQLIVFATSALLIFTVYVAFLYREMKAEMRLFVRRPSSNPIETPHVMSGGHPAD TNAGKRRTKDIPGKSSAIWPGTSLGKPSDTKKFRDYLETDGGDEVETNSRDTPVPPQTNP GRTVKAPTGSPKRVKSPGEIEGDGSSREEDEEAPYTFRDDPTIFPYRSSLKEHGKKQVGG SPYGRHTVKAVPDTPPSRGTLRDGDILEDEKEMPFYGFGRDPVIFPYRSSLKKHVKKQVV GSPIGEQTAKATPDEKLIHAETTSSDTRDTNVGKSEQTRTEREPKKALEPLKDATDEQGA SLPKAPRKRRDDQGSPAGKIPFIPPNVQQLGFSESSMQWRREAAAALGIPESDINDRPLI TSSPLLGKPAAVYRVGGDGSCFFRALSYAVTGSEDFASTIRRRIVSFIFDENPDLTSEHV LPTADIQAELRRATGSSGLFRLRAALWLGSTPVQNMTREQLLLAYKNYMSNAGTFATHRE VEAAAKLLNSRICVFVPGRPGTPQRDAWEIHSPKGFDDDLTESMPAVYLVNTGLVHFDVV TAVLTPTKMESVR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_216440.fa Sequence name : TGME49_216440 Sequence length : 613 VALUES OF COMPUTED PARAMETERS Coef20 : 4.566 CoefTot : 0.104 ChDiff : 17 ZoneTo : 23 KR : 5 DE : 0 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.224 2.382 0.409 0.808 MesoH : -0.731 0.175 -0.363 0.144 MuHd_075 : 18.453 11.753 4.346 4.868 MuHd_095 : 41.575 18.370 9.338 9.607 MuHd_100 : 43.257 16.944 9.474 9.743 MuHd_105 : 35.482 11.057 7.024 7.649 Hmax_075 : 12.250 9.683 -1.489 4.212 Hmax_095 : 10.763 9.625 1.150 4.393 Hmax_100 : 10.700 9.200 1.047 4.400 Hmax_105 : 6.800 2.567 -0.199 1.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3229 0.6771 DFMC : 0.4683 0.5317 This protein is probably imported in mitochondria. f(Ser) = 0.0435 f(Arg) = 0.1739 CMi = 0.13870 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 613 TGME49_216440 MLAAKRVAVTPRRPAPSPFRTGAEREARRKNEMDLQKEDKSAEYRRKRELRARKRRRRKRSDMFGDIQLIVFATSALLIF 80 TVYVAFLYREMKAEMRLFVRRPSSNPIETPHVMSGGHPADTNAGKRRTKDIPGKSSAIWPGTSLGKPSDTKKFRDYLETD 160 GGDEVETNSRDTPVPPQTNPGRTVKAPTGSPKRVKSPGEIEGDGSSREEDEEAPYTFRDDPTIFPYRSSLKEHGKKQVGG 240 SPYGRHTVKAVPDTPPSRGTLRDGDILEDEKEMPFYGFGRDPVIFPYRSSLKKHVKKQVVGSPIGEQTAKATPDEKLIHA 320 ETTSSDTRDTNVGKSEQTRTEREPKKALEPLKDATDEQGASLPKAPRKRRDDQGSPAGKIPFIPPNVQQLGFSESSMQWR 400 REAAAALGIPESDINDRPLITSSPLLGKPAAVYRVGGDGSCFFRALSYAVTGSEDFASTIRRRIVSFIFDENPDLTSEHV 480 LPTADIQAELRRATGSSGLFRLRAALWLGSTPVQNMTREQLLLAYKNYMSNAGTFATHREVEAAAKLLNSRICVFVPGRP 560 GTPQRDAWEIHSPKGFDDDLTESMPAVYLVNTGLVHFDVVTAVLTPTKMESVR 640 .......................................................P.P.P.................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .................................................P.............................. 400 ................................................................................ 480 ................................................................................ 560 ..................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 4 Name Pos Context Score Pred ____________________________v_________________ TGME49_216440 5 --MLAAK|RV 0.065 . TGME49_216440 6 -MLAAKR|VA 0.113 . TGME49_216440 12 RVAVTPR|RP 0.098 . TGME49_216440 13 VAVTPRR|PA 0.119 . TGME49_216440 20 PAPSPFR|TG 0.069 . TGME49_216440 25 FRTGAER|EA 0.100 . TGME49_216440 28 GAEREAR|RK 0.220 . TGME49_216440 29 AEREARR|KN 0.126 . TGME49_216440 30 EREARRK|NE 0.082 . TGME49_216440 37 NEMDLQK|ED 0.060 . TGME49_216440 40 DLQKEDK|SA 0.101 . TGME49_216440 45 DKSAEYR|RK 0.089 . TGME49_216440 46 KSAEYRR|KR 0.105 . TGME49_216440 47 SAEYRRK|RE 0.074 . TGME49_216440 48 AEYRRKR|EL 0.461 . TGME49_216440 51 RRKRELR|AR 0.250 . TGME49_216440 53 KRELRAR|KR 0.087 . TGME49_216440 54 RELRARK|RR 0.151 . TGME49_216440 55 ELRARKR|RR 0.129 . TGME49_216440 56 LRARKRR|RR 0.534 *ProP* TGME49_216440 57 RARKRRR|RK 0.143 . TGME49_216440 58 ARKRRRR|KR 0.576 *ProP* TGME49_216440 59 RKRRRRK|RS 0.372 . TGME49_216440 60 KRRRRKR|SD 0.846 *ProP* TGME49_216440 89 YVAFLYR|EM 0.085 . TGME49_216440 92 FLYREMK|AE 0.105 . TGME49_216440 96 EMKAEMR|LF 0.069 . TGME49_216440 100 EMRLFVR|RP 0.074 . TGME49_216440 101 MRLFVRR|PS 0.179 . TGME49_216440 125 ADTNAGK|RR 0.062 . TGME49_216440 126 DTNAGKR|RT 0.173 . TGME49_216440 127 TNAGKRR|TK 0.259 . TGME49_216440 129 AGKRRTK|DI 0.162 . TGME49_216440 134 TKDIPGK|SS 0.091 . TGME49_216440 146 PGTSLGK|PS 0.061 . TGME49_216440 151 GKPSDTK|KF 0.068 . TGME49_216440 152 KPSDTKK|FR 0.176 . TGME49_216440 154 SDTKKFR|DY 0.115 . TGME49_216440 170 EVETNSR|DT 0.078 . TGME49_216440 182 PQTNPGR|TV 0.113 . TGME49_216440 185 NPGRTVK|AP 0.154 . TGME49_216440 192 APTGSPK|RV 0.075 . TGME49_216440 193 PTGSPKR|VK 0.224 . TGME49_216440 195 GSPKRVK|SP 0.131 . TGME49_216440 207 EGDGSSR|EE 0.081 . TGME49_216440 218 EAPYTFR|DD 0.094 . TGME49_216440 227 PTIFPYR|SS 0.111 . TGME49_216440 231 PYRSSLK|EH 0.072 . TGME49_216440 235 SLKEHGK|KQ 0.065 . TGME49_216440 236 LKEHGKK|QV 0.192 . TGME49_216440 245 GGSPYGR|HT 0.141 . TGME49_216440 249 YGRHTVK|AV 0.089 . TGME49_216440 258 PDTPPSR|GT 0.084 . TGME49_216440 262 PSRGTLR|DG 0.127 . TGME49_216440 271 DILEDEK|EM 0.052 . TGME49_216440 280 PFYGFGR|DP 0.084 . TGME49_216440 288 PVIFPYR|SS 0.113 . TGME49_216440 292 PYRSSLK|KH 0.058 . TGME49_216440 293 YRSSLKK|HV 0.305 . TGME49_216440 296 SLKKHVK|KQ 0.066 . TGME49_216440 297 LKKHVKK|QV 0.200 . TGME49_216440 310 IGEQTAK|AT 0.069 . TGME49_216440 316 KATPDEK|LI 0.065 . TGME49_216440 328 TTSSDTR|DT 0.135 . TGME49_216440 334 RDTNVGK|SE 0.074 . TGME49_216440 339 GKSEQTR|TE 0.095 . TGME49_216440 342 EQTRTER|EP 0.166 . TGME49_216440 345 RTEREPK|KA 0.133 . TGME49_216440 346 TEREPKK|AL 0.144 . TGME49_216440 352 KALEPLK|DA 0.097 . TGME49_216440 364 QGASLPK|AP 0.062 . TGME49_216440 367 SLPKAPR|KR 0.088 . TGME49_216440 368 LPKAPRK|RR 0.100 . TGME49_216440 369 PKAPRKR|RD 0.281 . TGME49_216440 370 KAPRKRR|DD 0.645 *ProP* TGME49_216440 379 QGSPAGK|IP 0.063 . TGME49_216440 400 ESSMQWR|RE 0.105 . TGME49_216440 401 SSMQWRR|EA 0.240 . TGME49_216440 417 ESDINDR|PL 0.084 . TGME49_216440 428 SSPLLGK|PA 0.070 . TGME49_216440 434 KPAAVYR|VG 0.139 . TGME49_216440 444 DGSCFFR|AL 0.146 . TGME49_216440 461 DFASTIR|RR 0.066 . TGME49_216440 462 FASTIRR|RI 0.149 . TGME49_216440 463 ASTIRRR|IV 0.242 . TGME49_216440 491 DIQAELR|RA 0.084 . TGME49_216440 492 IQAELRR|AT 0.206 . TGME49_216440 501 GSSGLFR|LR 0.090 . TGME49_216440 503 SGLFRLR|AA 0.103 . TGME49_216440 518 PVQNMTR|EQ 0.061 . TGME49_216440 526 QLLLAYK|NY 0.058 . TGME49_216440 539 GTFATHR|EV 0.129 . TGME49_216440 546 EVEAAAK|LL 0.062 . TGME49_216440 551 AKLLNSR|IC 0.068 . TGME49_216440 559 CVFVPGR|PG 0.089 . TGME49_216440 565 RPGTPQR|DA 0.188 . TGME49_216440 574 WEIHSPK|GF 0.080 . TGME49_216440 608 AVLTPTK|ME 0.059 . TGME49_216440 613 TKMESVR|-- 0.117 . ____________________________^_________________

  • Fasta :-

    >TGME49_216440 CTCCGCAAGAGACTTTTTTCCAATTTCCTTTGATGTTTTTATCTGTCATGTCAATTCCCA AACCGTGCGATCTTCTGGCCCCGAACTTGCCTCTGTCAGCTCCCTGTCGGCACCCTTGCG TCACCATTCGGCAACGGAGACGGAGCCGTTAACGGACACAGGACCGACGAAAAGTCGGCA GACATCATCGGTGATTCTCTGCAATCCTTCGTCATTTTTCCCGAGGTTATGGCTCAGGAG AGGCATTCCTCCCTTGTTTCCCTTTGCTTTAAAGAACTGTTTGACTCCTCAGCGTATTCC TGGCAACCCAGAGAGACGGAGTGAGGCCACGTCTCCGTTCTCTGGTCGAATTCTCAAATG CGGAAGGCAACGTGAACGCACCTTGTGTGAATCCTTTGTTCTTTGTGTCATTTTCATTTG AATAGAAGCGGCCGCGAGTTTTTTGTGACTTGTCTTACCGATTGCAGTGGGTGAGGCCCC ATCGTGGGCAGTCTCCGTTGCTGCATCTTGCGAACCTTGTGTTCACTTGCCGGTTGCGGG TACCTCGGATTTGAAGGCAGGTACTTCTTTTATGTGTGTCAATTTGTGTCGGTCTTTCGC GCCTCCAGAATCCTTCAGGCAGGATCTGGATGCCGGGGCTGGTGGGAGCGTTTTACTGCC CGGCTGTCTTAGGTTACTGTGTTTTCTCCGCGTTCCCTATGCGCCTCTCGGTGCATTTGT GGAAGGCGGGAGGCTAGTTTCGAGTAGATTTTTTGAGGCAAATTCAACTCATGAGGCGAT TTCTGTAGTCACACGCAGCGTGAATAGTTGAGGGAGCTCGGGGAACCGGCGGTTGTATTT GTGGCGATGAGCCATGTCTCAACTGGTGTCCCGTTCTACTCGAGGTCGAAGAAAAGGTCA CTGAGTTTACGTACCGCTCTAAGGGGAACCCTGCTGCGTTGCTCAGGAACTGTGGTGCTC GGTCACAATTTTTGTTTTCCTTTCTAAAGCTCGAAGAACGGGCGGCGTTTCTCAAGTGCA TGTGGATCAATGTACCAATAGCCTTCTGCGTCCCGAGAGAGGCTCCGCGTTTTTTCCGTG TTGCTCGTGAAGGCGTTATTCTCGAGCAGATACCGTCTCTGTGGCTAAGTGTATTTTCAA GAGTTGTTTATTTTTTCCGACAAGATGCTGGCTGCGAAGAGAGTCGCTGTCACTCCTCGG CGGCCCGCCCCTTCCCCCTTTCGAACAGGTGCAGAGAGAGAGGCGAGGAGGAAGAACGAG ATGGACCTGCAAAAGGAGGACAAGTCTGCAGAATACAGGCGAAAAAGGGAGTTAAGAGCC CGGAAACGACGGAGAAGAAAGAGGAGCGACATGTTTGGCGATATACAGCTGATAGTGTTC GCTACTAGTGCTCTGCTCATATTCACCGTCTATGTCGCCTTCCTTTATCGAGAGATGAAA GCTGAAATGCGTCTCTTTGTTCGTCGACCTTCAAGCAACCCGATAGAGACCCCGCATGTA ATGTCCGGCGGACATCCCGCCGACACAAACGCGGGGAAGAGACGGACCAAGGACATCCCT GGCAAGAGCTCCGCTATCTGGCCAGGCACGAGTCTCGGCAAACCTTCCGACACGAAGAAA TTCAGGGACTACCTCGAGACGGACGGCGGGGATGAAGTTGAGACCAACTCACGTGACACC CCGGTCCCGCCACAAACGAATCCGGGCAGAACTGTCAAGGCTCCCACTGGGAGTCCGAAG CGCGTAAAAAGTCCTGGCGAAATTGAAGGCGACGGTTCGTCTCGAGAGGAGGACGAAGAG GCCCCGTATACCTTCCGTGATGATCCCACAATTTTTCCATATAGGTCTTCCCTCAAAGAG CACGGCAAGAAGCAAGTCGGCGGCAGCCCGTACGGTAGGCATACGGTGAAAGCGGTCCCT GATACGCCTCCCAGCCGTGGAACGCTTCGTGACGGCGATATCCTTGAAGACGAGAAAGAA ATGCCCTTCTACGGTTTCGGGAGAGATCCGGTTATCTTTCCATACAGGTCTTCCCTCAAA AAGCACGTCAAGAAGCAAGTCGTAGGCAGCCCGATCGGTGAGCAAACGGCGAAGGCGACC CCCGACGAGAAACTCATCCATGCAGAAACGACTTCCAGTGACACGCGAGACACGAATGTG GGCAAGTCCGAGCAGACGAGGACTGAACGCGAGCCTAAGAAAGCCCTCGAACCATTAAAG GATGCCACGGATGAACAGGGTGCATCTCTGCCCAAGGCGCCCCGCAAGCGCCGCGACGAT CAGGGGAGTCCCGCGGGCAAAATACCGTTTATTCCCCCCAATGTTCAGCAACTTGGATTC AGCGAGTCCTCTATGCAATGGCGCCGCGAAGCAGCGGCTGCGCTGGGAATTCCAGAGTCG GATATCAATGACCGACCACTGATCACGTCTTCTCCGCTTCTAGGCAAACCAGCGGCTGTG TACAGAGTTGGGGGTGACGGCTCGTGTTTCTTCCGTGCGTTGAGCTACGCAGTGACTGGC TCCGAGGACTTCGCGTCTACGATTCGACGACGAATTGTGAGTTTTATCTTCGACGAGAAT CCAGACCTCACATCGGAACACGTCCTGCCCACTGCAGATATTCAAGCGGAGCTGCGAAGA GCAACAGGGAGTTCCGGACTCTTCAGATTGAGAGCGGCTTTATGGCTTGGTTCTACACCG GTCCAAAACATGACACGCGAGCAGCTGCTTTTGGCGTACAAGAATTACATGTCCAACGCA GGGACCTTTGCGACGCATCGGGAGGTTGAAGCCGCGGCCAAACTGCTCAACTCTCGCATC TGTGTGTTTGTACCGGGGCGGCCGGGGACTCCTCAGAGAGATGCTTGGGAGATACATTCT CCGAAAGGCTTCGATGACGACCTGACAGAGAGCATGCCGGCCGTATATCTGGTGAACACG GGCCTCGTCCACTTTGACGTCGTCACCGCTGTGCTGACACCGACCAAGATGGAAAGTGTT CGGTAGCTGAGTGTTTGTTTTACGCTTGAAAAGACAGGCTTTCTGTGTACGTACCCCTGC CTGCATAGCCAGAGGTACAGACGTACCCGAGATGTGACAGGACCACCTGGCTGCATATTT GAATAATGGTCGCAGACACGTCCATATGTAGTATGTATTCTCCAAGGTCCGGCGGAAACT CTTGGGGTGTTCCAGTGTGCGAAACGGTGTTCAGGTAACTCTTTCCCTGGATCTCTTCGG TCGCGTCTGGTTGTGTGTTTTCTGCTCACGTAGTCGGTCAGAGGTGCTTTCACTTAGTTT TAAATCCCCCGCACAGTGTCGCAATAAGGGCGACCGAAAAGCAAGCTTTGATTTTAACTC GGATACGGTGCCCTTTCGGTGATCTTCGTCGTCTGGGCACTCCGTGTCTGCTTGTGAAGC TGCTCTGGACGCGGAAACGTTCATTTGCTTCACGCACAGACTTCCATGCTTTCCGGTGGA CCTTGCGATATGTGTGGGAAGGAGTCACTGTAAAGCAGCGTACGCGAGCGAGTGCTGTTG CAGTGAAGGGATATCAGAAAACGAACAGACACACGGATGGACCCATGGGAAACCGTGTGG ATACGTGAAGCGGTGTCCGTGCGTCAACAGTTTTGTTCAGTACGCTGTTCGGCAAAACTG ACGAAAAGCGACATATCGAATTGTGTCCCAAACAGTTCAGATAAGGGGGACGGAGCATCT ACTTGGGTGCAACGGTGGTCGAAATTTTTCCGTTACCATCTGTACGTTGACGCCTCAGTT CAAGGAGACCTTTGTTTGCAGTTTGTACTGTTACATTCAGGCG
  • Download Fasta

  • Fasta :-

    MLAAKRVAVTPRRPAPSPFRTGAEREARRKNEMDLQKEDKSAEYRRKRELRARKRRRRKR SDMFGDIQLIVFATSALLIFTVYVAFLYREMKAEMRLFVRRPSSNPIETPHVMSGGHPAD TNAGKRRTKDIPGKSSAIWPGTSLGKPSDTKKFRDYLETDGGDEVETNSRDTPVPPQTNP GRTVKAPTGSPKRVKSPGEIEGDGSSREEDEEAPYTFRDDPTIFPYRSSLKEHGKKQVGG SPYGRHTVKAVPDTPPSRGTLRDGDILEDEKEMPFYGFGRDPVIFPYRSSLKKHVKKQVV GSPIGEQTAKATPDEKLIHAETTSSDTRDTNVGKSEQTRTEREPKKALEPLKDATDEQGA SLPKAPRKRRDDQGSPAGKIPFIPPNVQQLGFSESSMQWRREAAAALGIPESDINDRPLI TSSPLLGKPAAVYRVGGDGSCFFRALSYAVTGSEDFASTIRRRIVSFIFDENPDLTSEHV LPTADIQAELRRATGSSGLFRLRAALWLGSTPVQNMTREQLLLAYKNYMSNAGTFATHRE VEAAAKLLNSRICVFVPGRPGTPQRDAWEIHSPKGFDDDLTESMPAVYLVNTGLVHFDVV TAVLTPTKMESVR

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_216440103 SVRRPSSNPI0.994unspTGME49_216440103 SVRRPSSNPI0.994unspTGME49_216440103 SVRRPSSNPI0.994unspTGME49_216440172 TNSRDTPVPP0.993unspTGME49_216440190 SAPTGSPKRV0.991unspTGME49_216440196 SKRVKSPGEI0.998unspTGME49_216440205 SEGDGSSREE0.997unspTGME49_216440206 SGDGSSREED0.996unspTGME49_216440229 SPYRSSLKEH0.995unspTGME49_216440260 TPSRGTLRDG0.992unspTGME49_21644017 SRPAPSPFRT0.994unspTGME49_21644061 SRRKRSDMFG0.996unsp

TGME49_016440      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India