TGME49_221450 | SPRY domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_221450OTHER0.9999990.0000010.000000
No Results

  • Fasta :-

    >TGME49_221450 MQPNTVPPHPIFSNPSSSSLYSSASYPPCAPSAYSSSLSPCFYPPAASPSSSAACTSYSP SPSSFASSSAYPRSSSPSCPSLSVRTSSLRSPPSASVSFASAALAAPPQGSASGSSGGRE TQRRAKAESKEASSLPANRRSPSSLSPVSSVSALRDEGSKPRPPSPRQRGRKNSALATAS SLPRHAALKRPRSEEDREKEREGSSVAAPLPALGPSPHRQTLPFFSLQQHPHDQHARHGT YGIIARGVCEREKSEDAGNKRGRQNKTPQLRDDRPFVCFSWRYRDAFLTLSTDRLVVTGH KGWSSAFATHCSEKDKWYFEVEVLPCETQNLRFIGYSQESLPPLKAHWRVGWACRYQTYD VPIGGNLHSFALCGACNETPMLATGGLKRRLAGEASCRDLPLLKEGDIIGCFLTLHEPRW WLPDPRKDPKLHEFLQAGILCSPDAQPPCVVNEGAWIEFSVNGERLGRVFEGMIGNGVYH PAVSLYMGAKLRLNPGPNFSFPPPPSEGFQPCSEMRRPHIP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_221450.fa Sequence name : TGME49_221450 Sequence length : 521 VALUES OF COMPUTED PARAMETERS Coef20 : 3.300 CoefTot : 0.038 ChDiff : 17 ZoneTo : 119 KR : 4 DE : 0 CleavSite : 92 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 0.947 0.158 0.469 MesoH : 0.621 0.127 -0.025 0.215 MuHd_075 : 26.025 21.776 7.972 5.825 MuHd_095 : 23.631 13.415 6.250 4.700 MuHd_100 : 15.732 9.633 4.715 4.794 MuHd_105 : 16.060 11.215 4.311 4.441 Hmax_075 : 9.600 15.050 2.534 5.000 Hmax_095 : 7.100 10.600 2.612 3.850 Hmax_100 : 10.700 8.500 2.280 3.600 Hmax_105 : 8.400 9.100 1.072 4.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5380 0.4620 DFMC : 0.0498 0.9502 This protein is probably imported in chloroplast. f(Ser) = 0.3529 f(Arg) = 0.0336 CMi = 3.01508 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 521 TGME49_221450 MQPNTVPPHPIFSNPSSSSLYSSASYPPCAPSAYSSSLSPCFYPPAASPSSSAACTSYSPSPSSFASSSAYPRSSSPSCP 80 SLSVRTSSLRSPPSASVSFASAALAAPPQGSASGSSGGRETQRRAKAESKEASSLPANRRSPSSLSPVSSVSALRDEGSK 160 PRPPSPRQRGRKNSALATASSLPRHAALKRPRSEEDREKEREGSSVAAPLPALGPSPHRQTLPFFSLQQHPHDQHARHGT 240 YGIIARGVCEREKSEDAGNKRGRQNKTPQLRDDRPFVCFSWRYRDAFLTLSTDRLVVTGHKGWSSAFATHCSEKDKWYFE 320 VEVLPCETQNLRFIGYSQESLPPLKAHWRVGWACRYQTYDVPIGGNLHSFALCGACNETPMLATGGLKRRLAGEASCRDL 400 PLLKEGDIIGCFLTLHEPRWWLPDPRKDPKLHEFLQAGILCSPDAQPPCVVNEGAWIEFSVNGERLGRVFEGMIGNGVYH 480 PAVSLYMGAKLRLNPGPNFSFPPPPSEGFQPCSEMRRPHIP 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_221450 73 SSSAYPR|SS 0.284 . TGME49_221450 85 CPSLSVR|TS 0.093 . TGME49_221450 90 VRTSSLR|SP 0.093 . TGME49_221450 119 SGSSGGR|ET 0.088 . TGME49_221450 123 GGRETQR|RA 0.099 . TGME49_221450 124 GRETQRR|AK 0.183 . TGME49_221450 126 ETQRRAK|AE 0.170 . TGME49_221450 130 RAKAESK|EA 0.070 . TGME49_221450 139 SSLPANR|RS 0.075 . TGME49_221450 140 SLPANRR|SP 0.167 . TGME49_221450 155 SSVSALR|DE 0.105 . TGME49_221450 160 LRDEGSK|PR 0.058 . TGME49_221450 162 DEGSKPR|PP 0.099 . TGME49_221450 167 PRPPSPR|QR 0.129 . TGME49_221450 169 PPSPRQR|GR 0.118 . TGME49_221450 171 SPRQRGR|KN 0.145 . TGME49_221450 172 PRQRGRK|NS 0.235 . TGME49_221450 184 TASSLPR|HA 0.125 . TGME49_221450 189 PRHAALK|RP 0.068 . TGME49_221450 190 RHAALKR|PR 0.177 . TGME49_221450 192 AALKRPR|SE 0.154 . TGME49_221450 197 PRSEEDR|EK 0.135 . TGME49_221450 199 SEEDREK|ER 0.062 . TGME49_221450 201 EDREKER|EG 0.085 . TGME49_221450 219 LGPSPHR|QT 0.077 . TGME49_221450 237 PHDQHAR|HG 0.103 . TGME49_221450 246 TYGIIAR|GV 0.208 . TGME49_221450 251 ARGVCER|EK 0.098 . TGME49_221450 253 GVCEREK|SE 0.082 . TGME49_221450 260 SEDAGNK|RG 0.057 . TGME49_221450 261 EDAGNKR|GR 0.173 . TGME49_221450 263 AGNKRGR|QN 0.102 . TGME49_221450 266 KRGRQNK|TP 0.112 . TGME49_221450 271 NKTPQLR|DD 0.097 . TGME49_221450 274 PQLRDDR|PF 0.103 . TGME49_221450 282 FVCFSWR|YR 0.106 . TGME49_221450 284 CFSWRYR|DA 0.149 . TGME49_221450 294 LTLSTDR|LV 0.095 . TGME49_221450 301 LVVTGHK|GW 0.069 . TGME49_221450 314 ATHCSEK|DK 0.078 . TGME49_221450 316 HCSEKDK|WY 0.094 . TGME49_221450 332 CETQNLR|FI 0.107 . TGME49_221450 345 ESLPPLK|AH 0.062 . TGME49_221450 349 PLKAHWR|VG 0.089 . TGME49_221450 355 RVGWACR|YQ 0.095 . TGME49_221450 388 LATGGLK|RR 0.056 . TGME49_221450 389 ATGGLKR|RL 0.130 . TGME49_221450 390 TGGLKRR|LA 0.206 . TGME49_221450 398 AGEASCR|DL 0.084 . TGME49_221450 404 RDLPLLK|EG 0.060 . TGME49_221450 419 LTLHEPR|WW 0.080 . TGME49_221450 426 WWLPDPR|KD 0.071 . TGME49_221450 427 WLPDPRK|DP 0.083 . TGME49_221450 430 DPRKDPK|LH 0.069 . TGME49_221450 465 FSVNGER|LG 0.076 . TGME49_221450 468 NGERLGR|VF 0.215 . TGME49_221450 490 SLYMGAK|LR 0.061 . TGME49_221450 492 YMGAKLR|LN 0.078 . TGME49_221450 516 QPCSEMR|RP 0.083 . TGME49_221450 517 PCSEMRR|PH 0.141 . ____________________________^_________________

  • Fasta :-

    >TGME49_221450 CTCAAGCGAATCGAGAACATGCAGAAAGAAAGCAAGAGGCGACAGGCGAGAGGCGACAGG CAGGACGCTTTTTCATCCGTCGCCTTCATGTTCGTCTCCTTTCTCTTTTCTTTAGATGTG ATCCTCTGCCTCCTTACCAGCCTACTCATCTAATTTGTTCTTCTCTCTAGCCTCTCCATC TCTCTTACACTTCCTCTCGCCTTCACTCTTCTCTCTGTCTCCTTGTATGTCGTCTGTTTC TTTCCGTCCTCTTGAATTCCGGTCGATCTTCGCCTGTGGTCTCCGCCTAATACCGTCGTC CGTTCTCGCTTTCAGAACTTTTGTGTTTCTTTCTCTCTCGCCTCACATCGCGTCTTCGGC GAAAGTCTCCACTCTTCTCCTCTCCACGTCCTTTATATTCACTTCTTCTTTCCTCCGCAA TGCAGCCAAACACTGTTCCTCCCCACCCTATCTTCTCGAATCCTTCTTCCTCTTCTCTTT ATTCGTCTGCTTCTTATCCGCCTTGCGCGCCGAGCGCGTACTCTTCCTCTCTCTCTCCTT GCTTTTACCCTCCTGCTGCTTCTCCGTCTTCTTCTGCTGCTTGTACGTCTTATTCTCCGT CTCCTTCGTCCTTTGCTTCTTCCTCCGCGTATCCTCGGTCTTCTTCTCCTTCATGCCCTT CTCTTTCTGTTCGGACTTCGTCTCTCCGCTCTCCTCCCTCTGCCTCTGTCTCCTTTGCTT CTGCCGCACTGGCAGCGCCCCCACAAGGATCTGCCTCTGGCTCTTCTGGCGGCCGAGAGA CACAGCGACGAGCGAAGGCCGAAAGCAAAGAAGCTTCCTCTCTCCCCGCAAATCGCCGTT CGCCCTCATCGCTCTCGCCTGTCTCTTCCGTCTCTGCTCTCCGGGATGAGGGAAGCAAGC CGCGACCGCCGTCGCCGCGACAGAGAGGCCGAAAGAACTCTGCTCTCGCAACCGCCTCTT CACTGCCCAGACACGCTGCCCTCAAGCGGCCTCGCAGCGAAGAAGACCGAGAAAAAGAGA GAGAAGGATCTTCCGTTGCTGCTCCGCTGCCTGCTCTCGGTCCGTCTCCCCACAGACAGA CTCTCCCGTTCTTCTCTCTTCAGCAACATCCTCACGACCAACATGCAAGACATGGAACCT ACGGCATCATCGCTCGAGGCGTCTGCGAAAGAGAGAAAAGCGAAGATGCAGGAAACAAAC GTGGAAGACAAAACAAAACTCCACAACTCCGAGACGACCGCCCATTCGTCTGCTTCTCCT GGCGCTACCGCGATGCCTTTCTGACTCTCTCCACAGATCGCCTCGTCGTCACTGGCCACA AAGGATGGAGCAGCGCCTTCGCGACGCACTGCTCAGAGAAAGACAAATGGTACTTCGAGG TCGAGGTTCTGCCATGTGAGACACAGAATCTGCGTTTCATTGGTTACTCCCAGGAGAGCC TTCCTCCTCTGAAGGCGCACTGGAGAGTTGGCTGGGCATGTCGCTACCAGACGTACGACG TTCCGATTGGAGGCAATTTGCACTCGTTTGCGCTCTGCGGCGCATGCAACGAAACGCCGA TGCTCGCGACAGGCGGTCTGAAGAGACGCCTCGCCGGCGAAGCCTCCTGCCGCGACCTGC CTCTGCTCAAGGAAGGCGACATCATCGGCTGCTTCTTGACGCTCCACGAGCCGCGCTGGT GGCTGCCCGATCCTCGCAAGGATCCGAAACTCCACGAATTTCTCCAGGCGGGGATCCTCT GCAGTCCAGACGCTCAGCCTCCGTGCGTCGTCAATGAGGGCGCGTGGATTGAATTTTCTG TCAACGGAGAAAGGTTGGGACGCGTCTTCGAAGGCATGATTGGCAACGGCGTTTATCATC CAGCTGTTTCGCTCTACATGGGGGCGAAGCTTCGTCTTAATCCAGGCCCAAACTTCTCCT TTCCACCTCCGCCATCTGAGGGATTCCAGCCATGCAGCGAAATGCGCCGACCTCACATCC CCTGAAAAAGAGTCAAACGCGGCTTACGCGTTCAGCGCATGCAGTTTGCATGTGTGCGTT GCATGCGTCGCCTCCCTGGTGGTGGCGGGCGTTGCGTCGGAGGATGGCGAAGACTGAGAG ACTGCTTTGTCGGCAGAAGGGAAGATCGTCTTTGCACAGTGTTGATTGTCACTTTTTCTT CGGTCTGTCTCTGGAAAAAGACGGAGGACGCGGAGATGGAGCAGAGGCCGAATAAACCTC AATCAGGAGGAAAAAAGTCTGTGTTTCAGAGACGCCAGATTTGTTCCAGAACGAAAAGGC ATTTTTCCACCTGAGACGGAGACAGCGAGAGGGCGGGAAGGTACAATGCGAAGAGGAGGA GAGAGAGAAACAAAGGCAGGTGGAGAGAAGAGGAGTGGCGACGCAAGTTGCGGAGGACTT TGTTTCATTTTTCCTGTTCTCCGTCCAATGTCATTTGAGAGAGAATCCCCTTGGCAGTTA TGTTCTGAGACTTTTGACGGCCTCAAGTGCCATCGTCTCCTCTCCTTTTCGTCCTTTGTG CTTTGCCTTGCTCGCCGTCATTGTGCGTCCGTTGCGCGCCTTCCGCGCTTCTCCTTCTGT CTCCTTGCTTCGCTTTCTTCTTCTTCCCTCTTCTTCTGCTTCTTTCGTCCTCCGTGATTG TTCCCCTCTCTCCGTCCGCTTGTTCTCGTCCGTTTCTCTTGTCCTTTCACCTGCGAGGCC GTGACGTCGCCTCGGCCTTTTTTTTGAGGCGAGAGGCGCGCCAACCACCTTGAATGACAG ACTGTAAAAATCCGTACACCTGCGTCGAAAACTCCGTAGAGCCGTCAGTCCTCTGCAACT TCTTTTTTCGAGCGCGAAGGTCACAGTGCTGCTCGCATGCTGCGCTGCGATGCGTCTGAA GAATCGGCGCGTCTCGCCTCGACAAAAAAACGCCCAACTCCACACCCGGGCATCGCCACG ATTTCTCTGGTCGCCTCGATTCCTTTCCCCCTCGACTCATGAGCTCCCCAAATTCGCCGC TTGCACATCTACTCCATACATGTATAAATC
  • Download Fasta

  • Fasta :-

    MQPNTVPPHPIFSNPSSSSLYSSASYPPCAPSAYSSSLSPCFYPPAASPSSSAACTSYSP SPSSFASSSAYPRSSSPSCPSLSVRTSSLRSPPSASVSFASAALAAPPQGSASGSSGGRE TQRRAKAESKEASSLPANRRSPSSLSPVSSVSALRDEGSKPRPPSPRQRGRKNSALATAS SLPRHAALKRPRSEEDREKEREGSSVAAPLPALGPSPHRQTLPFFSLQQHPHDQHARHGT YGIIARGVCEREKSEDAGNKRGRQNKTPQLRDDRPFVCFSWRYRDAFLTLSTDRLVVTGH KGWSSAFATHCSEKDKWYFEVEVLPCETQNLRFIGYSQESLPPLKAHWRVGWACRYQTYD VPIGGNLHSFALCGACNETPMLATGGLKRRLAGEASCRDLPLLKEGDIIGCFLTLHEPRW WLPDPRKDPKLHEFLQAGILCSPDAQPPCVVNEGAWIEFSVNGERLGRVFEGMIGNGVYH PAVSLYMGAKLRLNPGPNFSFPPPPSEGFQPCSEMRRPHIP

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_22145091 SSSLRSPPSA0.991unspTGME49_22145091 SSSLRSPPSA0.991unspTGME49_22145091 SSSLRSPPSA0.991unspTGME49_221450121 TGGRETQRRA0.992unspTGME49_221450129 SAKAESKEAS0.996unspTGME49_221450141 SANRRSPSSL0.992unspTGME49_221450165 SPRPPSPRQR0.996unspTGME49_221450193 SKRPRSEEDR0.998unspTGME49_22145076 SPRSSSPSCP0.994unspTGME49_22145088 SVRTSSLRSP0.994unsp

TGME49_021450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India