TGME49_222860 | eukaryotic translation initiation factor, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_222860OTHER0.9998000.0000710.000129
No Results

  • Fasta :-

    >TGME49_222860 MVRIDKDDLPAEEQDLLEFLSEDSDEGEDDDSEQGEEKLKEKLSQMEPLLQMDYSFPSTI VLVGVPKVGKDKHEKLRLVLDKKMGEELLKKGAESVNEGLTISMPVNEETGMTKGFCFVT FSNQFNAQHAAHHLNGWALDAKHTFRAALLDDFDEIVGRGANYRPPIKLLGFTRENFRWW LLDARGREQFVIRYAGETEIYWHDPIERDCSVLVYNGHRERADGKRVWTDFRVQWSPQGS FLATFHRPGIALWAGDQFEKKVRFEHKDVKQIDFSPNETYVITWDGSPAQLRNEKAVRIW KVMTGELLRQFPTPAYSPRGGEYPHFLFSHDDRYVARMGEKELCVYQMECDDEPEAEGEK SDEKGRKDRCAVRLLRDPRDGKLSSLKYPLEKFEWSPTENIISVWIKGSEDAPGRLLLVE IPSRRELSSKNVYNVKGASMHWQSKGDFLCLRTVAFKKTGKKGKKEFTQLEIFRMREKDI PVDNVQLNDVAVQLHWEEGYSKRFALVVHDEQTSNQALRFYRVCDASEDGKRDTILIYSF DISGYMNYMQWSPFGSYFILASLGLDGTLLFCCLNDQDTVQVLHMDEHFMVNEVRWSACG RYLSTAVVLPMLPSSNTASFRLGSNTGYKIWTFQGKLQYKCQKDQFYQFLWRPHPPSLLK KEKIEEIKKKMKDYSKRYEAEDEKLRLEQRSAFIRQRKEEMDEFTKVLDGLNQWKVDHEL YDDWQLAYETFDAQFDWEDKEEVIEDELEVKEEIIT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_222860.fa Sequence name : TGME49_222860 Sequence length : 756 VALUES OF COMPUTED PARAMETERS Coef20 : 3.171 CoefTot : 0.135 ChDiff : -26 ZoneTo : 4 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.618 1.994 0.427 0.672 MesoH : -0.067 0.464 -0.245 0.289 MuHd_075 : 20.968 7.474 3.956 2.463 MuHd_095 : 24.252 17.361 5.815 5.960 MuHd_100 : 15.840 13.179 3.888 4.281 MuHd_105 : 4.102 4.249 1.008 1.486 Hmax_075 : -11.375 4.025 -4.700 1.243 Hmax_095 : -9.800 6.125 -3.903 2.327 Hmax_100 : -6.200 6.600 -3.299 2.280 Hmax_105 : -10.600 1.517 -4.562 1.270 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9922 0.0078 DFMC : 0.9926 0.0074
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 756 TGME49_222860 MVRIDKDDLPAEEQDLLEFLSEDSDEGEDDDSEQGEEKLKEKLSQMEPLLQMDYSFPSTIVLVGVPKVGKDKHEKLRLVL 80 DKKMGEELLKKGAESVNEGLTISMPVNEETGMTKGFCFVTFSNQFNAQHAAHHLNGWALDAKHTFRAALLDDFDEIVGRG 160 ANYRPPIKLLGFTRENFRWWLLDARGREQFVIRYAGETEIYWHDPIERDCSVLVYNGHRERADGKRVWTDFRVQWSPQGS 240 FLATFHRPGIALWAGDQFEKKVRFEHKDVKQIDFSPNETYVITWDGSPAQLRNEKAVRIWKVMTGELLRQFPTPAYSPRG 320 GEYPHFLFSHDDRYVARMGEKELCVYQMECDDEPEAEGEKSDEKGRKDRCAVRLLRDPRDGKLSSLKYPLEKFEWSPTEN 400 IISVWIKGSEDAPGRLLLVEIPSRRELSSKNVYNVKGASMHWQSKGDFLCLRTVAFKKTGKKGKKEFTQLEIFRMREKDI 480 PVDNVQLNDVAVQLHWEEGYSKRFALVVHDEQTSNQALRFYRVCDASEDGKRDTILIYSFDISGYMNYMQWSPFGSYFIL 560 ASLGLDGTLLFCCLNDQDTVQVLHMDEHFMVNEVRWSACGRYLSTAVVLPMLPSSNTASFRLGSNTGYKIWTFQGKLQYK 640 CQKDQFYQFLWRPHPPSLLKKEKIEEIKKKMKDYSKRYEAEDEKLRLEQRSAFIRQRKEEMDEFTKVLDGLNQWKVDHEL 720 YDDWQLAYETFDAQFDWEDKEEVIEDELEVKEEIIT 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_222860 3 ----MVR|ID 0.087 . TGME49_222860 6 -MVRIDK|DD 0.147 . TGME49_222860 38 SEQGEEK|LK 0.064 . TGME49_222860 40 QGEEKLK|EK 0.058 . TGME49_222860 42 EEKLKEK|LS 0.060 . TGME49_222860 67 VLVGVPK|VG 0.058 . TGME49_222860 70 GVPKVGK|DK 0.078 . TGME49_222860 72 PKVGKDK|HE 0.058 . TGME49_222860 75 GKDKHEK|LR 0.058 . TGME49_222860 77 DKHEKLR|LV 0.146 . TGME49_222860 82 LRLVLDK|KM 0.077 . TGME49_222860 83 RLVLDKK|MG 0.091 . TGME49_222860 90 MGEELLK|KG 0.058 . TGME49_222860 91 GEELLKK|GA 0.128 . TGME49_222860 114 EETGMTK|GF 0.062 . TGME49_222860 142 GWALDAK|HT 0.070 . TGME49_222860 146 DAKHTFR|AA 0.088 . TGME49_222860 159 FDEIVGR|GA 0.099 . TGME49_222860 164 GRGANYR|PP 0.105 . TGME49_222860 168 NYRPPIK|LL 0.065 . TGME49_222860 174 KLLGFTR|EN 0.078 . TGME49_222860 178 FTRENFR|WW 0.069 . TGME49_222860 185 WWLLDAR|GR 0.079 . TGME49_222860 187 LLDARGR|EQ 0.085 . TGME49_222860 193 REQFVIR|YA 0.185 . TGME49_222860 208 WHDPIER|DC 0.094 . TGME49_222860 219 LVYNGHR|ER 0.077 . TGME49_222860 221 YNGHRER|AD 0.110 . TGME49_222860 225 RERADGK|RV 0.082 . TGME49_222860 226 ERADGKR|VW 0.249 . TGME49_222860 232 RVWTDFR|VQ 0.073 . TGME49_222860 247 FLATFHR|PG 0.086 . TGME49_222860 260 AGDQFEK|KV 0.067 . TGME49_222860 261 GDQFEKK|VR 0.091 . TGME49_222860 263 QFEKKVR|FE 0.112 . TGME49_222860 267 KVRFEHK|DV 0.148 . TGME49_222860 270 FEHKDVK|QI 0.072 . TGME49_222860 292 GSPAQLR|NE 0.095 . TGME49_222860 295 AQLRNEK|AV 0.147 . TGME49_222860 298 RNEKAVR|IW 0.091 . TGME49_222860 301 KAVRIWK|VM 0.111 . TGME49_222860 309 MTGELLR|QF 0.067 . TGME49_222860 319 TPAYSPR|GG 0.134 . TGME49_222860 333 LFSHDDR|YV 0.199 . TGME49_222860 337 DDRYVAR|MG 0.146 . TGME49_222860 341 VARMGEK|EL 0.064 . TGME49_222860 360 PEAEGEK|SD 0.081 . TGME49_222860 364 GEKSDEK|GR 0.054 . TGME49_222860 366 KSDEKGR|KD 0.087 . TGME49_222860 367 SDEKGRK|DR 0.113 . TGME49_222860 369 EKGRKDR|CA 0.414 . TGME49_222860 373 KDRCAVR|LL 0.090 . TGME49_222860 376 CAVRLLR|DP 0.246 . TGME49_222860 379 RLLRDPR|DG 0.169 . TGME49_222860 382 RDPRDGK|LS 0.104 . TGME49_222860 387 GKLSSLK|YP 0.065 . TGME49_222860 392 LKYPLEK|FE 0.061 . TGME49_222860 407 IISVWIK|GS 0.103 . TGME49_222860 415 SEDAPGR|LL 0.084 . TGME49_222860 424 LVEIPSR|RE 0.065 . TGME49_222860 425 VEIPSRR|EL 0.127 . TGME49_222860 430 RRELSSK|NV 0.096 . TGME49_222860 436 KNVYNVK|GA 0.078 . TGME49_222860 445 SMHWQSK|GD 0.079 . TGME49_222860 452 GDFLCLR|TV 0.097 . TGME49_222860 457 LRTVAFK|KT 0.086 . TGME49_222860 458 RTVAFKK|TG 0.098 . TGME49_222860 461 AFKKTGK|KG 0.063 . TGME49_222860 462 FKKTGKK|GK 0.086 . TGME49_222860 464 KTGKKGK|KE 0.085 . TGME49_222860 465 TGKKGKK|EF 0.114 . TGME49_222860 474 TQLEIFR|MR 0.096 . TGME49_222860 476 LEIFRMR|EK 0.092 . TGME49_222860 478 IFRMREK|DI 0.071 . TGME49_222860 502 WEEGYSK|RF 0.060 . TGME49_222860 503 EEGYSKR|FA 0.286 . TGME49_222860 519 TSNQALR|FY 0.146 . TGME49_222860 522 QALRFYR|VC 0.387 . TGME49_222860 531 DASEDGK|RD 0.061 . TGME49_222860 532 ASEDGKR|DT 0.170 . TGME49_222860 595 FMVNEVR|WS 0.088 . TGME49_222860 601 RWSACGR|YL 0.188 . TGME49_222860 621 SNTASFR|LG 0.088 . TGME49_222860 629 GSNTGYK|IW 0.071 . TGME49_222860 636 IWTFQGK|LQ 0.070 . TGME49_222860 640 QGKLQYK|CQ 0.071 . TGME49_222860 643 LQYKCQK|DQ 0.079 . TGME49_222860 652 FYQFLWR|PH 0.075 . TGME49_222860 660 HPPSLLK|KE 0.057 . TGME49_222860 661 PPSLLKK|EK 0.132 . TGME49_222860 663 SLLKKEK|IE 0.077 . TGME49_222860 668 EKIEEIK|KK 0.058 . TGME49_222860 669 KIEEIKK|KM 0.070 . TGME49_222860 670 IEEIKKK|MK 0.148 . TGME49_222860 672 EIKKKMK|DY 0.089 . TGME49_222860 676 KMKDYSK|RY 0.063 . TGME49_222860 677 MKDYSKR|YE 0.207 . TGME49_222860 684 YEAEDEK|LR 0.054 . TGME49_222860 686 AEDEKLR|LE 0.065 . TGME49_222860 690 KLRLEQR|SA 0.152 . TGME49_222860 695 QRSAFIR|QR 0.122 . TGME49_222860 697 SAFIRQR|KE 0.106 . TGME49_222860 698 AFIRQRK|EE 0.239 . TGME49_222860 706 EMDEFTK|VL 0.058 . TGME49_222860 715 DGLNQWK|VD 0.058 . TGME49_222860 740 QFDWEDK|EE 0.053 . TGME49_222860 751 EDELEVK|EE 0.056 . ____________________________^_________________

  • Fasta :-

    >TGME49_222860 GCGAGAGTTCTGAGGGGAAAGCGCTGCAGGGTTTTTTGGCGTGTTTGCTGGCTGGAAATC GCGCGCGACGGGACCGAGGACTTTCGAGGTCTTTTCTTTTTCTCAATCTGGCATCGCCAG AAGGTGTCAGTCTTGCGGCGGAAATTTTCACCGGGGCAGCCCCGACTTTCCCGCCTCGCC ACTGAGAGATTTATGGTACTTTGAATCGTTTTTCAGCCCCCACGACGCGTTGCCGTTCTC CGCCTGTCTCTCTTATCCGTCACCGGTTCCATTTCGTCCTTCGTTTCCGTAGCCCACTCC CGGTTTTTCCCTCTGTCTCTCGAAGCCTCTGTCTGGTCCCCAGTCGCAAAGCTTGTGGGG GGTCACTTTTTCTTCACATTTTTCTCCCTTACGCAGTCACGGAGTTCCCCTAACCGGCTC CTCAGTCCTTCTCGTCGTTTTCTCTTCCCCGGCCTTTTCCCCTTTAACCAGGGTGTCTAT CGCGGCTTTTCGGCGCCCGTCACGTCCCCCCTGATCTCCGCTTCTGCTCGCGCCTACCGC AAGATGGTTCGGATCGATAAGGACGACCTCCCAGCGGAGGAACAAGACCTCCTGGAGTTT CTGTCTGAAGACAGCGACGAAGGCGAAGATGATGATTCTGAACAAGGAGAGGAGAAGCTG AAGGAGAAGCTTTCTCAGATGGAGCCTCTTCTTCAGATGGACTACTCCTTTCCGTCCACT ATCGTTCTTGTTGGTGTTCCCAAGGTCGGCAAAGACAAGCACGAGAAACTGCGTCTTGTC TTAGACAAGAAGATGGGAGAGGAGTTGTTGAAGAAGGGCGCTGAGAGTGTAAACGAGGGC CTCACCATTTCGATGCCTGTCAACGAAGAAACCGGAATGACAAAGGGCTTCTGCTTTGTC ACGTTCAGCAACCAGTTTAACGCACAGCATGCAGCGCACCACCTCAATGGCTGGGCGCTG GATGCGAAACACACTTTCCGGGCTGCTTTGTTGGACGACTTCGACGAGATCGTTGGACGC GGCGCGAATTACCGCCCGCCCATCAAACTCCTCGGATTCACCCGCGAGAACTTCCGCTGG TGGCTATTGGATGCCCGTGGCCGCGAGCAATTCGTCATTCGCTACGCTGGCGAGACGGAG ATTTACTGGCATGACCCAATTGAGAGAGACTGCAGCGTTCTGGTCTATAACGGGCATCGA GAGCGCGCTGACGGCAAGCGTGTGTGGACAGACTTCCGCGTCCAGTGGTCTCCTCAAGGT TCTTTCCTTGCGACGTTCCACAGGCCTGGTATCGCGCTCTGGGCGGGTGACCAGTTTGAG AAGAAAGTTCGTTTTGAGCACAAAGACGTCAAACAGATCGACTTTTCGCCCAATGAGACG TACGTGATCACTTGGGATGGAAGCCCTGCCCAGCTGCGCAACGAGAAGGCGGTTCGCATC TGGAAGGTCATGACTGGCGAGCTTCTGCGGCAGTTCCCCACACCTGCTTACTCTCCTCGT GGAGGCGAATATCCGCATTTTCTTTTCTCTCATGACGACCGCTACGTTGCGCGCATGGGC GAGAAGGAGCTCTGTGTCTACCAGATGGAGTGCGACGACGAGCCAGAAGCTGAAGGCGAA AAGAGCGATGAAAAAGGGAGAAAGGATCGCTGCGCCGTTCGTCTTCTGCGTGACCCGCGC GACGGAAAGCTGTCGTCTCTGAAGTATCCTCTTGAAAAGTTCGAGTGGTCGCCGACAGAA AACATCATTTCTGTCTGGATCAAGGGATCTGAAGATGCTCCCGGTCGGCTGCTTTTGGTT GAAATTCCGAGTCGTCGCGAACTGAGCAGCAAGAACGTGTACAACGTCAAGGGTGCGTCG ATGCACTGGCAGTCCAAGGGAGACTTCCTCTGCCTTCGTACGGTCGCGTTCAAGAAAACC GGAAAGAAGGGGAAGAAAGAGTTTACTCAGCTCGAAATCTTCCGTATGAGAGAGAAGGAC ATCCCGGTCGACAACGTGCAACTCAACGATGTGGCTGTGCAGCTGCACTGGGAAGAAGGA TACAGCAAGAGATTCGCTCTTGTTGTCCACGATGAGCAGACGAGCAACCAGGCTCTTCGA TTCTACCGCGTGTGCGATGCCAGCGAAGACGGCAAGCGCGACACGATTTTGATTTACTCC TTCGACATCAGTGGATACATGAACTACATGCAGTGGTCGCCGTTTGGTTCGTACTTCATC CTTGCTTCTCTCGGTCTCGACGGAACTCTCCTTTTTTGCTGCCTGAACGATCAAGACACT GTCCAGGTGCTCCACATGGATGAACACTTCATGGTCAACGAAGTCAGGTGGTCTGCATGC GGTCGATACCTCAGCACGGCGGTCGTGCTCCCGATGCTTCCGAGCAGCAACACCGCCTCC TTCCGTCTGGGTTCCAACACAGGTTACAAGATCTGGACGTTCCAAGGCAAACTGCAGTAC AAGTGCCAAAAGGATCAGTTCTACCAGTTCCTGTGGCGACCACATCCGCCGTCGCTTTTG AAGAAAGAGAAGATCGAGGAAATCAAGAAGAAAATGAAGGATTACAGCAAACGGTACGAG GCAGAGGACGAGAAACTGCGACTGGAGCAGCGATCCGCCTTCATCCGTCAAAGAAAGGAG GAAATGGACGAATTTACCAAAGTCCTCGACGGACTCAACCAGTGGAAGGTCGACCATGAG CTTTACGACGACTGGCAGCTGGCTTATGAAACATTCGACGCCCAGTTTGACTGGGAGGAT AAAGAAGAAGTTATCGAAGACGAACTCGAAGTCAAGGAGGAGATCATTACATAAACTTCG AAACTGGGAGTGGGAGACGATTCGTGCTTTTTCGTCCTGTCACCTTGCTCTCTACTGGTC GCTTCTTGTCGTTGTCGCTCTCTGTGAAAACTTGTTCTTGTGACACACATTCTACCCTAT GACCCCAAAATAGCAGTCATTTCCTCAGAATGTGTCAAAACCCGGTCGGGTACTGGTGCT CTCCTAAATCAAAACCGAGGACGATTATATTGTTCCATCTCCTCGCCTCCGGGCCCCATC AGTCTGCTCTTTCTTTCATGAAAAGCACCTCGGCTGGTGCGTAACACTTCACTGAAATAA CGGAGAAACACGCTGCAACTGTCATCTTGTCTAGATGAACATGAACGTAGCACCGATCCC TTGGCACGATGAAGACTCTTCACATCTCGGCTTTCGGAGCTTTCTAAAGATTCACCAGAC GATGCGAACGCTGCCCAACAGCCCAGACACACGGTCACTTCCTTGCTGGATGCCGGAAAC ACCTGGAGTATTTGCAGCCGGATACACGAATGCTCGCACCAGAATGAAGCACAAGAGAGT AGAAGATGTTCAGTGGCTTTATGCATATTCAGGCTTGATGGTAAGTGTAATCAGCGTCGG TTTCACGATGAACAAAAGAGGAGCCCCGCGCTACGGTAGGCGATGCAGAAGTTGTGTTTC GGCAGATGGAAGCAATTCCTCTCTCGCCTTTGGACTGATGTGAAGTGCGTGCGGAACCGA TGTTTGTACCAAAGGGAACAAGCGCGTAAAAGATCGAATGCGCCGCGTTAGTTTCGGTTA CACTCCGTGCCGTACACCACCACTGCCACGATGCACAGCATTTGTGCGTGCTTACATTTC GAACGATCTCCCTAAGCTCGACGCTGTTGTGTATCGATGTTGCACCTAGGAGACTCCTTC ACCGAAGTGCCAGTTTGGCGCAAGGGCCTCCGATGTTCTTTCCGAGCTGGCTGTTCATTT GCAAGCGCACACACGACTACGGCTCAGACAAAAGAATGTTACTCAGA
  • Download Fasta

  • Fasta :-

    MVRIDKDDLPAEEQDLLEFLSEDSDEGEDDDSEQGEEKLKEKLSQMEPLLQMDYSFPSTI VLVGVPKVGKDKHEKLRLVLDKKMGEELLKKGAESVNEGLTISMPVNEETGMTKGFCFVT FSNQFNAQHAAHHLNGWALDAKHTFRAALLDDFDEIVGRGANYRPPIKLLGFTRENFRWW LLDARGREQFVIRYAGETEIYWHDPIERDCSVLVYNGHRERADGKRVWTDFRVQWSPQGS FLATFHRPGIALWAGDQFEKKVRFEHKDVKQIDFSPNETYVITWDGSPAQLRNEKAVRIW KVMTGELLRQFPTPAYSPRGGEYPHFLFSHDDRYVARMGEKELCVYQMECDDEPEAEGEK SDEKGRKDRCAVRLLRDPRDGKLSSLKYPLEKFEWSPTENIISVWIKGSEDAPGRLLLVE IPSRRELSSKNVYNVKGASMHWQSKGDFLCLRTVAFKKTGKKGKKEFTQLEIFRMREKDI PVDNVQLNDVAVQLHWEEGYSKRFALVVHDEQTSNQALRFYRVCDASEDGKRDTILIYSF DISGYMNYMQWSPFGSYFILASLGLDGTLLFCCLNDQDTVQVLHMDEHFMVNEVRWSACG RYLSTAVVLPMLPSSNTASFRLGSNTGYKIWTFQGKLQYKCQKDQFYQFLWRPHPPSLLK KEKIEEIKKKMKDYSKRYEAEDEKLRLEQRSAFIRQRKEEMDEFTKVLDGLNQWKVDHEL YDDWQLAYETFDAQFDWEDKEEVIEDELEVKEEIIT

  • title: polypeptide substrate binding site
  • coordinates: L62,V65,K72,K75,L76,L78,V79,L80,K82,K83,K90,H133,L134,N135,G136,A138,L139,T144,F145
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_222860275 SQIDFSPNET0.996unspTGME49_222860275 SQIDFSPNET0.996unspTGME49_222860275 SQIDFSPNET0.996unspTGME49_222860317 STPAYSPRGG0.995unspTGME49_222860361 SEGEKSDEKG0.993unspTGME49_222860428 SRRELSSKNV0.993unspTGME49_22286024 SLSEDSDEGE0.992unspTGME49_22286095 SKGAESVNEG0.994unsp

TGME49_022860      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India