TGME49_225580 | proteasome (prosome, macropain) 26S subunit, non-ATPase, 9, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005515      

  • Computed_GO_Functions:  protein binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_225580OTHER0.9999830.0000100.000007
No Results

  • Fasta :-

    >TGME49_225580 MAELLEKLNVLVEKQKKMEEEMEALADYLTQPGMPGLTGGLVDDEGFPRADIDIYAIRGA RNRLAILKTDYKEVRSQIEKELFALHAQGPVAVPRTGCVSTGDALNAASLSPDSNTALEE NPFIPFAKISELHENSPASKAGLRLDDLILQFGAVFIRRKSLPEPSEGDKQQVAADPGGD RPGCSSVEQVFERLPHEVGNHTGEEIDITVFRNNAILNLKLIPQTWEGMGLVGCRFTPVT KGML
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_225580.fa Sequence name : TGME49_225580 Sequence length : 244 VALUES OF COMPUTED PARAMETERS Coef20 : 3.321 CoefTot : 0.141 ChDiff : -11 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.494 1.282 -0.022 0.456 MesoH : -0.733 0.131 -0.426 0.172 MuHd_075 : 16.870 5.920 4.588 2.178 MuHd_095 : 26.108 15.650 7.551 4.351 MuHd_100 : 40.729 22.835 10.793 6.678 MuHd_105 : 46.704 26.055 11.908 7.685 Hmax_075 : -0.817 7.817 -2.512 2.742 Hmax_095 : 1.500 10.100 -2.084 2.760 Hmax_100 : 13.700 17.800 1.535 5.290 Hmax_105 : 4.300 8.500 -1.432 2.930 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9777 0.0223 DFMC : 0.9636 0.0364
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 244 TGME49_225580 MAELLEKLNVLVEKQKKMEEEMEALADYLTQPGMPGLTGGLVDDEGFPRADIDIYAIRGARNRLAILKTDYKEVRSQIEK 80 ELFALHAQGPVAVPRTGCVSTGDALNAASLSPDSNTALEENPFIPFAKISELHENSPASKAGLRLDDLILQFGAVFIRRK 160 SLPEPSEGDKQQVAADPGGDRPGCSSVEQVFERLPHEVGNHTGEEIDITVFRNNAILNLKLIPQTWEGMGLVGCRFTPVT 240 KGML 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_225580 7 MAELLEK|LN 0.061 . TGME49_225580 14 LNVLVEK|QK 0.078 . TGME49_225580 16 VLVEKQK|KM 0.068 . TGME49_225580 17 LVEKQKK|ME 0.114 . TGME49_225580 49 DDEGFPR|AD 0.087 . TGME49_225580 58 IDIYAIR|GA 0.108 . TGME49_225580 61 YAIRGAR|NR 0.185 . TGME49_225580 63 IRGARNR|LA 0.103 . TGME49_225580 68 NRLAILK|TD 0.064 . TGME49_225580 72 ILKTDYK|EV 0.073 . TGME49_225580 75 TDYKEVR|SQ 0.161 . TGME49_225580 80 VRSQIEK|EL 0.075 . TGME49_225580 95 GPVAVPR|TG 0.106 . TGME49_225580 128 PFIPFAK|IS 0.077 . TGME49_225580 140 ENSPASK|AG 0.063 . TGME49_225580 144 ASKAGLR|LD 0.079 . TGME49_225580 158 FGAVFIR|RK 0.095 . TGME49_225580 159 GAVFIRR|KS 0.115 . TGME49_225580 160 AVFIRRK|SL 0.084 . TGME49_225580 170 EPSEGDK|QQ 0.069 . TGME49_225580 181 ADPGGDR|PG 0.073 . TGME49_225580 193 VEQVFER|LP 0.106 . TGME49_225580 212 IDITVFR|NN 0.079 . TGME49_225580 220 NAILNLK|LI 0.059 . TGME49_225580 235 MGLVGCR|FT 0.091 . TGME49_225580 241 RFTPVTK|GM 0.059 . ____________________________^_________________

  • Fasta :-

    >TGME49_225580 CTCGAAACAGCGGAAAGCGGTTCGCCCGCTTGCAAAGGGATGCGCTCGCCGCTTTCCCTG TCCTGATACCCTGCTGCATGCAGTGCCGGATTAGCGTTAGTCGTCGCAGTCAGTGAACAG TCGCCGTTGGAATACCAGCATTTTCCCATGCAACGTAGTCCGTCTTACCAGCAAAAAATG TGACGCTTCAGAGTCACTTGAAATATGCCGTAATCACATCATCATCAGTATCTACTGCGT CCTTAAGCGAGGCCCTGTAGATCTCGTGCATTTGTTACGAGCTATGTCTTCACAGTTGTG GCACACAATGATCTCTCTACACAGACTCTTGTGCTGACACGTTAAATATTTGCAGTGACA TAAGGACCTGCAATAGAGTTGGTGCTGCATAACCCTGTCCGGAAGTGTCTTTATGAGCTG CGGGAAGGAGGCAGCTATTACGTTACGTGGAACAACCATCAGGCCTGCATGAAGCGATCA CGTTCTTCTGTCACAGTCGTTGCATGCTTATCTGTACGCTGTGTTCCAACAGTTTTTGAT ATGGTCCTGTTTACCAGATGCGCGCTGGTCTTGTTCAACTCATGGCAGTGTAGAGGGCGC CCCAAAGCCAACATCCTCCAAAATTTTCGTCACAGGTTAAGAAGTCACTGCTCGGCACAT GCTTTCAGCTGACATCTATGCATGATGCCGATTATCGTCTCGAAAGAACGTGTGCCTCCA ATAAGCCGGAACTGCATACAGGCTAATGAGTGCGTGGGGTGCTTGCTCTGTTCGGCTGCT TCGTTGCTGTAGCGACTGGTGAACTGCAAGGCTTTCAATCTGGTATGCACACGGGGGGAC ATCGTCGCTGTTTCAAAGCTGGTTGTGTATTCGCTTTTTTTCTGCGTCTTCTGTTCGTGT GCGGTCCACCAAATTCAAGAAGATGGCGGAACTGCTTGAGAAGCTAAATGTTCTGGTGGA GAAACAGAAAAAGATGGAGGAGGAAATGGAGGCACTTGCAGACTACCTCACCCAGCCAGG AATGCCTGGTTTGACTGGCGGGCTGGTAGACGACGAGGGTTTCCCGCGTGCAGATATCGA TATTTATGCCATTCGTGGTGCCCGCAACCGGCTGGCTATCCTTAAGACTGACTACAAAGA GGTCCGTTCTCAGATCGAGAAGGAGCTCTTTGCCCTGCACGCCCAAGGCCCGGTGGCAGT TCCTCGCACGGGTTGTGTAAGCACAGGAGACGCTTTAAATGCAGCCTCGTTGTCCCCTGA TTCGAACACTGCACTGGAGGAAAATCCCTTCATTCCATTCGCGAAGATCAGTGAGCTGCA TGAGAATAGTCCAGCGTCAAAAGCCGGTCTTCGTCTAGATGATCTCATCCTTCAGTTTGG TGCCGTCTTCATTCGCAGAAAAAGTCTGCCAGAACCGTCGGAAGGGGATAAACAGCAAGT TGCTGCTGATCCGGGAGGGGATAGACCCGGCTGCAGTAGTGTGGAGCAGGTTTTCGAGAG GCTTCCTCATGAAGTTGGGAACCACACAGGGGAGGAGATCGATATCACTGTCTTCCGCAA TAATGCAATTCTAAATCTGAAGCTTATTCCTCAAACGTGGGAAGGCATGGGTCTCGTGGG ATGCCGATTCACACCCGTAACAAAAGGGATGCTGTAACAATTCTCTGTTTGCCTGAGCGC ATTCTTCAGCGCGACAGCCAAGGCTGCGTAAAATTTTCACGTGACTAAGCGAAAGCGAAG TCGTCCGCGCTCTACCGTACGTTGTGGAGATTCGGGCTCCACTGACACATGATCCGGTAT TGCCTTGAACCTTTCCAGACGTTGCGGTGAAAGTTCACAGGAAGGCG
  • Download Fasta

  • Fasta :-

    MAELLEKLNVLVEKQKKMEEEMEALADYLTQPGMPGLTGGLVDDEGFPRADIDIYAIRGA RNRLAILKTDYKEVRSQIEKELFALHAQGPVAVPRTGCVSTGDALNAASLSPDSNTALEE NPFIPFAKISELHENSPASKAGLRLDDLILQFGAVFIRRKSLPEPSEGDKQQVAADPGGD RPGCSSVEQVFERLPHEVGNHTGEEIDITVFRNNAILNLKLIPQTWEGMGLVGCRFTPVT KGML

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_225580100 STGCVSTGDA0.993unspTGME49_225580161 SIRRKSLPEP0.998unsp

TGME49_025580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India