TGME49_227952 | 14-3-3 superfamily protein

  • Computed_GO_Component_IDs:        

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  • Computed_GO_Function_IDs:        

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  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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No Results
No Results

  • Fasta :-

    >TGME49_227952 MSISLATLPLAGGLAVPPQEKTQRSQSGALRVPSSPPTPKADPSTPEHTSAFEKLKIHQI AMRVVKVAELQRRLRHKKLAPLQDEEQIAALSGIRLENVLAFRNLVSATKRATAASVPIG EKDPLLGRTTLALSIFNIPTEVQRRITDKDRWRRLFPAARGERPGGGLTLLFLALMAEAC RRFDEADVYVIQLLVRKASRLEELTEEERACVQRAFNRRIQRSKHSLKQVTALERAFDAR RDAGQPNRTYRLAEVAAYKERLKDDIVRHCYAIVWAVTHLIMPSPGSAATQMFSYKWIAT AFRQVTQFTDSVPQYQCLQLAESNYQQAVNVAKTDTTLRPCDMLRIETLISWANFLFYNL EKRQEALASARETLQEAIAQLETVPEEHFAEVVEALQILMKSVWRWNQESRKDAMYDWWS SL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_227952.fa Sequence name : TGME49_227952 Sequence length : 422 VALUES OF COMPUTED PARAMETERS Coef20 : 3.580 CoefTot : -1.188 ChDiff : 12 ZoneTo : 41 KR : 4 DE : 1 CleavSite : 33 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.712 1.465 0.248 0.604 MesoH : -0.289 0.144 -0.367 0.164 MuHd_075 : 17.089 10.504 4.804 3.213 MuHd_095 : 30.091 11.239 5.939 5.502 MuHd_100 : 32.510 11.370 6.599 6.518 MuHd_105 : 32.565 14.780 7.257 6.717 Hmax_075 : 3.300 19.717 0.148 2.637 Hmax_095 : 5.513 -1.800 -0.601 2.170 Hmax_100 : 1.500 -1.400 -1.930 1.180 Hmax_105 : 7.467 0.350 0.376 1.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8510 0.1490 DFMC : 0.6552 0.3448
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 422 TGME49_227952 MSISLATLPLAGGLAVPPQEKTQRSQSGALRVPSSPPTPKADPSTPEHTSAFEKLKIHQIAMRVVKVAELQRRLRHKKLA 80 PLQDEEQIAALSGIRLENVLAFRNLVSATKRATAASVPIGEKDPLLGRTTLALSIFNIPTEVQRRITDKDRWRRLFPAAR 160 GERPGGGLTLLFLALMAEACRRFDEADVYVIQLLVRKASRLEELTEEERACVQRAFNRRIQRSKHSLKQVTALERAFDAR 240 RDAGQPNRTYRLAEVAAYKERLKDDIVRHCYAIVWAVTHLIMPSPGSAATQMFSYKWIATAFRQVTQFTDSVPQYQCLQL 320 AESNYQQAVNVAKTDTTLRPCDMLRIETLISWANFLFYNLEKRQEALASARETLQEAIAQLETVPEEHFAEVVEALQILM 400 KSVWRWNQESRKDAMYDWWSSL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_227952 21 AVPPQEK|TQ 0.055 . TGME49_227952 24 PQEKTQR|SQ 0.177 . TGME49_227952 31 SQSGALR|VP 0.080 . TGME49_227952 40 SSPPTPK|AD 0.063 . TGME49_227952 54 HTSAFEK|LK 0.077 . TGME49_227952 56 SAFEKLK|IH 0.071 . TGME49_227952 63 IHQIAMR|VV 0.137 . TGME49_227952 66 IAMRVVK|VA 0.193 . TGME49_227952 72 KVAELQR|RL 0.078 . TGME49_227952 73 VAELQRR|LR 0.125 . TGME49_227952 75 ELQRRLR|HK 0.180 . TGME49_227952 77 QRRLRHK|KL 0.084 . TGME49_227952 78 RRLRHKK|LA 0.334 . TGME49_227952 95 AALSGIR|LE 0.059 . TGME49_227952 103 ENVLAFR|NL 0.073 . TGME49_227952 110 NLVSATK|RA 0.061 . TGME49_227952 111 LVSATKR|AT 0.282 . TGME49_227952 122 SVPIGEK|DP 0.060 . TGME49_227952 128 KDPLLGR|TT 0.062 . TGME49_227952 144 IPTEVQR|RI 0.097 . TGME49_227952 145 PTEVQRR|IT 0.153 . TGME49_227952 149 QRRITDK|DR 0.083 . TGME49_227952 151 RITDKDR|WR 0.074 . TGME49_227952 153 TDKDRWR|RL 0.103 . TGME49_227952 154 DKDRWRR|LF 0.361 . TGME49_227952 160 RLFPAAR|GE 0.108 . TGME49_227952 163 PAARGER|PG 0.198 . TGME49_227952 181 LMAEACR|RF 0.082 . TGME49_227952 182 MAEACRR|FD 0.148 . TGME49_227952 196 VIQLLVR|KA 0.099 . TGME49_227952 197 IQLLVRK|AS 0.077 . TGME49_227952 200 LVRKASR|LE 0.080 . TGME49_227952 209 ELTEEER|AC 0.063 . TGME49_227952 214 ERACVQR|AF 0.112 . TGME49_227952 218 VQRAFNR|RI 0.106 . TGME49_227952 219 QRAFNRR|IQ 0.150 . TGME49_227952 222 FNRRIQR|SK 0.399 . TGME49_227952 224 RRIQRSK|HS 0.079 . TGME49_227952 228 RSKHSLK|QV 0.113 . TGME49_227952 235 QVTALER|AF 0.084 . TGME49_227952 240 ERAFDAR|RD 0.113 . TGME49_227952 241 RAFDARR|DA 0.269 . TGME49_227952 248 DAGQPNR|TY 0.089 . TGME49_227952 251 QPNRTYR|LA 0.465 . TGME49_227952 259 AEVAAYK|ER 0.053 . TGME49_227952 261 VAAYKER|LK 0.114 . TGME49_227952 263 AYKERLK|DD 0.059 . TGME49_227952 268 LKDDIVR|HC 0.100 . TGME49_227952 296 TQMFSYK|WI 0.102 . TGME49_227952 303 WIATAFR|QV 0.152 . TGME49_227952 333 QAVNVAK|TD 0.070 . TGME49_227952 339 KTDTTLR|PC 0.074 . TGME49_227952 345 RPCDMLR|IE 0.075 . TGME49_227952 362 LFYNLEK|RQ 0.059 . TGME49_227952 363 FYNLEKR|QE 0.105 . TGME49_227952 371 EALASAR|ET 0.088 . TGME49_227952 401 ALQILMK|SV 0.101 . TGME49_227952 405 LMKSVWR|WN 0.095 . TGME49_227952 411 RWNQESR|KD 0.091 . TGME49_227952 412 WNQESRK|DA 0.128 . ____________________________^_________________

  • Fasta :-

    >TGME49_227952 CTCGTGGAGTTTGCCTGCGTACCACGAGTGCCCGTGCATCGACAGTCCCGTACACACAAG TTGCACAATTTCAGCGTCGCTAGTCTCGGAAGGGTCCAGCTGGCTCGACGCCTTTGAGCG TTTACTGATAGGAAGCGATGCCCCGGTCGTGCCATGAGGCACGAAGTGCTTCAGAAAAGA AAAAAGATTTCTCCTGCCTTCGCTTCGACACTTCCGAGGAGTGCGAGGCAAAAAAACACC AAAATGCATGAGTTACCCTGCCTGGTTCGCTGTCTCGAGGCGCCGTAGCATTTGCTTGTT CCGAGTCATGCTCGGCCGAGCATCGAGCGTTCGGAGACACGCCAAGCACATTTTCTAAAA CTACGTGTCGGTTCGTAAATGCAGGATTTTTTCGGTTGTCACTTTTCTGAACTCGAGAGA GTCGTCGCTAGCTACCATTTCTCCGCGACCAGGTGACTTACACGCAGCTCGCCACTGCTT CCGTACTCAAAGTCTGTTTGTCTTCTAATTGCATGCTCCTCGTGCCTTTCATGGTTTCAG CGACTCATCTCTTTCCGCGTTTCAGGCCCTTCGTTTACAGCGTCCTCGCGACTCTGCAGA TTCTCCCTCCACACTGACCCTCCACTCTGCTGCGTTTCTCTAACGTGGCTTTCGTTCTCA ACACCGACCAAGATACACTCGTGGGTTCCTCCCCGGATTGGAAGCACCTCTCAAAAGTGT CGTCCAAGCCGAGTCGAGAAATCTGCCGCAGTTGAAGGGTCTCGCGGACAGAGTGTGAGC TTTGTCTGTGGGGATCTGTTCACCAAGACGGGAAAGGGAGTCACAACTGGCACTAGGGAC TGCTGGGATTGCTAACGCGAGTGATACGAACATGTTTCGAAACGGAAGTCAACGCTTTTT TGCAGTGTATAGAGTGCGGCTTTTCTTCAAAGTACCAGCCCGTTTTGGAAGTTTTCGTCA GAGAACGGCGCAGCCCCCCGACGGCGTCGGTCGATTGGTGAAGTCGCATGAGTCCGAAAA AGCAGGTTGTCACGGCTTTCAACCGTCCACCAACTGAACAGACGCTTCAGAATCCAAGAG TCTTCACACTCAGGTCACACGAAAATTGTCGAGCGCGGCATTTTGCCAACGAAAGAACAT TTTCCACACGACCCGAGATCGGGAACGGTACGCGTGGTATGAACTGCCGGCTGTGACTCA CCGCCAGGACTTCATAGAGCGATTCGAGTTCACCGCTTGTGGGGAAGTCAACAGGACTTG CGCCACAGCGAATGTAGAGGTGCACGCTACATTCACACTTTTTTCTGTGTTTCTGAATCG ATAAAATTCCAACTCCCGCGCCGCCACCGTCGGACCAGACAAACGCGCCCATAGAATCTG GGAACCCCCCCGAAAGCCAGTGTGTAGTTTCTACCTTTCTACGAAGTTGAGCGACCCCAG CGCTTCTTGCGAAGAGTGGCTGCTCTGGACGGCGAAATGTCGATCTCCCTCGCGACACTC CCCCTAGCAGGGGGGCTGGCTGTTCCGCCGCAGGAGAAAACGCAAAGATCTCAGTCTGGC GCACTGCGTGTGCCTTCTTCGCCTCCCACCCCCAAGGCGGATCCTTCGACTCCGGAGCAT ACGAGTGCTTTCGAGAAATTGAAGATTCACCAGATCGCGATGCGAGTGGTGAAAGTGGCG GAACTGCAGCGGCGCCTGCGCCATAAAAAACTGGCACCTCTGCAAGACGAAGAACAAATT GCAGCTCTCAGTGGAATTCGCCTGGAAAACGTCTTGGCTTTTCGCAACCTCGTCAGTGCA ACAAAGCGTGCGACTGCTGCCTCCGTTCCTATCGGAGAAAAAGATCCACTTCTCGGCAGA ACTACGCTAGCCTTGAGCATCTTCAACATTCCTACAGAAGTCCAAAGACGCATCACGGAC AAAGACAGGTGGAGGCGACTCTTCCCGGCCGCCCGCGGAGAACGACCCGGTGGCGGTTTG ACATTACTTTTTCTGGCGTTGATGGCTGAAGCTTGTCGTCGATTTGACGAGGCGGACGTC TACGTCATTCAGCTGCTCGTCCGCAAGGCATCTCGACTTGAGGAGCTGACAGAGGAAGAG AGAGCGTGTGTCCAGCGTGCGTTCAATCGCCGAATCCAACGAAGCAAGCATTCTTTGAAG CAGGTGACGGCGCTCGAGAGGGCCTTCGACGCTCGACGAGACGCTGGACAGCCGAACAGA ACCTACCGACTTGCGGAGGTAGCAGCGTACAAAGAGAGACTGAAGGACGACATCGTCCGG CACTGCTACGCCATCGTGTGGGCAGTGACTCACCTAATTATGCCGAGTCCTGGATCGGCC GCGACGCAGATGTTTTCTTACAAGTGGATCGCCACGGCCTTTCGGCAGGTTACGCAATTC ACTGACTCCGTCCCTCAGTACCAGTGCCTCCAGCTCGCGGAATCGAACTACCAGCAAGCA GTGAACGTCGCAAAAACAGACACGACCCTAAGGCCTTGCGACATGCTACGGATCGAGACC CTGATCAGCTGGGCAAATTTTCTGTTTTATAATTTGGAGAAGCGACAAGAAGCGTTGGCA TCGGCCCGCGAGACACTCCAGGAAGCCATTGCTCAACTCGAAACGGTGCCTGAAGAGCAT TTCGCTGAAGTTGTCGAGGCGTTGCAAATTCTCATGAAAAGCGTGTGGCGATGGAACCAA GAAAGTCGGAAAGACGCCATGTACGACTGGTGGTCAAGTTTGTGAAAGCTTGATTTTGAA TCGAATCAGCTGAAGCGACAGTAACTTGTCGCAGATTTTCGGGTATTTCCCCAGATTTTT GAGCAGGGTTTGCGACCCCGTCGGTGGGTTACACAGGGATGGGGGAGCGACTTTATACCG ACCTGTTTGGGGGTTCCAAAGTCGTCTTACCAAGAACTAATGCGATCTCTTATTTCCTCG CATCACTTTAAGAAGGGATGTCTAAAAACAACAGACCTAGGCAGGGTTCAGATTTTTTGG AATGACACCTCATGAATCTGTTCATGACGACCCGTTGACGTGCATGACGCAGAGTGACAG CATCGTCCATTTGAGAAACGAACACTTGCACACAAGGTGTTTCTCAATGATTTTAACACA CGCCAACAACAGAGACGCTTTCATCAAGGAAACTCTACTTGTAAAAAAATTCACAACAGG ACACGCTTCGATCTGTGCCGTCACTTTACCGGCTACTCCCGCGTAAGTCGGCTCTGTGTT ACGCGCCGCTGCCTTCTGTTTTGAAGCCACTATTCCCCTCCCTAGGAATCTCGATGCCCA GTTTGATTGAGGGCGCCACACGGAGAACCCTCTTTTTCATTTTTGTCGGGGTCGATTCGA TCGAAGGAAAGCTCACTAAGTGACTCCGCAACCGCGTGTCGTCGTTCGTCGCTCTGCATG CAAAGAATGCCGCTCTAGTCCCGAAGTCGATTTTCTCGCTTCCTCCCTTGTGTCGATGAC CACACGCGCACTTTCCTCGCGGATCTGTCGAAGTTTTCTCTTGACTTTGTGCGTGCGGTT TTTCTGCCGTTCAACGAACCCACAAGGGAATCTTGCCGCTAGACTTTGAGGCTGAAGTGC GATTGCTGCCACGGAACGCCGTGTAATAATAGCGTGCCGAGGGACTGAGGGGCACTCTGA AACGTTTCTTTGTGGCCTCTGCGACGTCTTCCGCCTCGATTTCTAACTGTTTCTCTACAG TTTTGTAGTTTATCACTCCAACATCCAGACGCCACACCGGGAAAGAGTGTGGGGGTGCAC TACGTTTGAGGTAGGTTCCGCGTTTCACCGAAGTTCCGGTGGCTAGCGCCGTTTCTCGGC GTCACCCCGTCACGCATCGCACGATAGAGTCCTCCCTTTTTTGCAGCGGGCATGTAGCTT GTGGATTTTTCTCTCGTTTTCGCTTCTGGTCACGAGATTCCCGGTTTGCTGGTTCGCGAG ATCCTGACGTCGCCGGGATGCGCCGCGTTCGTACACTTCGCCGGCGCATTTCTCGCCGTC GACAAGAAAGCGCGTTCTGGTCGCAGAGACAGCGTTGAAAAGGAGAGATGGCGAGGTTGA GAGATTCGCATGCAGCACCGGAAACGCAGTTTACTCATGACCGACCTACAACCGTGGTGT CTTGGTCGCATGAACGACAAAGCTTGGCAGCTGGCCCGCAGCCGCCTTTCTCGCAGTCGC CGCGGATGGCGCGAATTCCACATGTCGATCGCCCGTGTTCCCCGCCATAAAAAATTGCTA CGATTGTCACCATTTGTTTTCTGAACATTTGAAGCCTCACTGCAAGCAACCACGCACGCA TCTTTGTTCCCCTGCGCCGCTGCTGCCGCG
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  • Fasta :-

  • title: peptide binding site
  • coordinates: N217,K224,K296,R303,Q304,E347,I350,S351,N354,F357,Y358,A395,I398
No Results
No Results
IDSitePeptideScoreMethod
TGME49_227952410 SWNQESRKDA0.996unsp

TGME49_027950      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India