TGME49_231130 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

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  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

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_IDPredictionOTHERSPmTPCS_Position
TGME49_231130OTHER0.9972230.0009590.001818
No Results

  • Fasta :-

    >TGME49_231130 MEQISRLTPRVGLCAPAEDSSTKWGRRLCDHVWPTSFGRDKTHERWTSASVASLARRQAA VLYPVVLLGIAILFARSHFLTVAQASPAVDFEAFPLLQYETFSAGMSKAAPVMLGAWGSS ALNGALAAATVIVADSGQQSEGPGGEGQAPDEKLLEHPLLQQQLRSLSKKNIYIFRATHV PVALVDALLDRAQNVLLLLPPRAPEETGESGALDEAQVSEAERKRVYALEQRLITRFSAG ACVFAFETPELATLYEELREQQTRFLANPNSLYANSLLPAFLYKGLAPTVSIQRGPLPPS HFAAGLQSASRLSAPLQGRNVFAWLPGRRPQEGGAAPTIAIVAHYDAFAAVPHLAFGAEG NGSGVAALMELARIFSRLYSGADQEDSQSAKAGSREPGNYSLLFLLADAGAADFAGAAQW LAKTEPRILESITYVLCLDDIAASPQLYLHTAKKYKEPRVRKLLQSLETAFVQSDLLLTL DPRKIVVQTPPKPFWAHEHFTMKKVIAGTLSSKPHGGGLWVRSSILDQNSSAKSRENLLR VVGALAEGLAHFVYEVDDFSVNIIEGSNRPLASFLHSWLSLASRSPRFYAFRQADKNAAK RNQTHAPSGAFADELHARLEKLVPSAQSQTFSLPASGTVFTYEPPMFLSVIETRPVLFDI LCLFTAVAYCFTIYYSIVGWHFVLPAISNLTASVGALVAGAGHERPSRKAA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_231130.fa Sequence name : TGME49_231130 Sequence length : 711 VALUES OF COMPUTED PARAMETERS Coef20 : 3.844 CoefTot : -0.236 ChDiff : 3 ZoneTo : 17 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.082 2.559 0.445 0.885 MesoH : 0.963 1.129 0.057 0.498 MuHd_075 : 11.702 3.516 3.379 3.673 MuHd_095 : 42.867 16.196 8.865 7.910 MuHd_100 : 34.396 17.498 7.491 6.979 MuHd_105 : 27.016 21.005 7.328 6.241 Hmax_075 : 0.817 5.833 0.495 2.473 Hmax_095 : 12.700 11.600 2.208 4.770 Hmax_100 : 13.500 12.600 2.053 4.070 Hmax_105 : 7.438 15.200 2.082 4.410 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9325 0.0675 DFMC : 0.9642 0.0358
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 711 TGME49_231130 MEQISRLTPRVGLCAPAEDSSTKWGRRLCDHVWPTSFGRDKTHERWTSASVASLARRQAAVLYPVVLLGIAILFARSHFL 80 TVAQASPAVDFEAFPLLQYETFSAGMSKAAPVMLGAWGSSALNGALAAATVIVADSGQQSEGPGGEGQAPDEKLLEHPLL 160 QQQLRSLSKKNIYIFRATHVPVALVDALLDRAQNVLLLLPPRAPEETGESGALDEAQVSEAERKRVYALEQRLITRFSAG 240 ACVFAFETPELATLYEELREQQTRFLANPNSLYANSLLPAFLYKGLAPTVSIQRGPLPPSHFAAGLQSASRLSAPLQGRN 320 VFAWLPGRRPQEGGAAPTIAIVAHYDAFAAVPHLAFGAEGNGSGVAALMELARIFSRLYSGADQEDSQSAKAGSREPGNY 400 SLLFLLADAGAADFAGAAQWLAKTEPRILESITYVLCLDDIAASPQLYLHTAKKYKEPRVRKLLQSLETAFVQSDLLLTL 480 DPRKIVVQTPPKPFWAHEHFTMKKVIAGTLSSKPHGGGLWVRSSILDQNSSAKSRENLLRVVGALAEGLAHFVYEVDDFS 560 VNIIEGSNRPLASFLHSWLSLASRSPRFYAFRQADKNAAKRNQTHAPSGAFADELHARLEKLVPSAQSQTFSLPASGTVF 640 TYEPPMFLSVIETRPVLFDILCLFTAVAYCFTIYYSIVGWHFVLPAISNLTASVGALVAGAGHERPSRKAA 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ....................................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_231130 6 -MEQISR|LT 0.074 . TGME49_231130 10 ISRLTPR|VG 0.084 . TGME49_231130 23 AEDSSTK|WG 0.061 . TGME49_231130 26 SSTKWGR|RL 0.108 . TGME49_231130 27 STKWGRR|LC 0.162 . TGME49_231130 39 WPTSFGR|DK 0.138 . TGME49_231130 41 TSFGRDK|TH 0.068 . TGME49_231130 45 RDKTHER|WT 0.136 . TGME49_231130 56 SVASLAR|RQ 0.086 . TGME49_231130 57 VASLARR|QA 0.166 . TGME49_231130 76 IAILFAR|SH 0.121 . TGME49_231130 108 FSAGMSK|AA 0.078 . TGME49_231130 153 GQAPDEK|LL 0.066 . TGME49_231130 165 LLQQQLR|SL 0.196 . TGME49_231130 169 QLRSLSK|KN 0.066 . TGME49_231130 170 LRSLSKK|NI 0.201 . TGME49_231130 176 KNIYIFR|AT 0.100 . TGME49_231130 191 VDALLDR|AQ 0.079 . TGME49_231130 202 LLLLPPR|AP 0.086 . TGME49_231130 223 QVSEAER|KR 0.086 . TGME49_231130 224 VSEAERK|RV 0.112 . TGME49_231130 225 SEAERKR|VY 0.151 . TGME49_231130 232 VYALEQR|LI 0.071 . TGME49_231130 236 EQRLITR|FS 0.090 . TGME49_231130 259 TLYEELR|EQ 0.074 . TGME49_231130 264 LREQQTR|FL 0.101 . TGME49_231130 284 LPAFLYK|GL 0.075 . TGME49_231130 294 PTVSIQR|GP 0.062 . TGME49_231130 311 GLQSASR|LS 0.076 . TGME49_231130 319 SAPLQGR|NV 0.153 . TGME49_231130 328 FAWLPGR|RP 0.075 . TGME49_231130 329 AWLPGRR|PQ 0.110 . TGME49_231130 373 ALMELAR|IF 0.095 . TGME49_231130 377 LARIFSR|LY 0.097 . TGME49_231130 391 EDSQSAK|AG 0.085 . TGME49_231130 395 SAKAGSR|EP 0.077 . TGME49_231130 423 AAQWLAK|TE 0.070 . TGME49_231130 427 LAKTEPR|IL 0.106 . TGME49_231130 453 LYLHTAK|KY 0.057 . TGME49_231130 454 YLHTAKK|YK 0.123 . TGME49_231130 456 HTAKKYK|EP 0.066 . TGME49_231130 459 KKYKEPR|VR 0.079 . TGME49_231130 461 YKEPRVR|KL 0.107 . TGME49_231130 462 KEPRVRK|LL 0.215 . TGME49_231130 483 LLTLDPR|KI 0.075 . TGME49_231130 484 LTLDPRK|IV 0.083 . TGME49_231130 492 VVQTPPK|PF 0.068 . TGME49_231130 503 HEHFTMK|KV 0.101 . TGME49_231130 504 EHFTMKK|VI 0.095 . TGME49_231130 513 AGTLSSK|PH 0.068 . TGME49_231130 522 GGGLWVR|SS 0.119 . TGME49_231130 533 DQNSSAK|SR 0.095 . TGME49_231130 535 NSSAKSR|EN 0.091 . TGME49_231130 540 SRENLLR|VV 0.174 . TGME49_231130 569 IIEGSNR|PL 0.095 . TGME49_231130 584 WLSLASR|SP 0.110 . TGME49_231130 587 LASRSPR|FY 0.369 . TGME49_231130 592 PRFYAFR|QA 0.132 . TGME49_231130 596 AFRQADK|NA 0.066 . TGME49_231130 600 ADKNAAK|RN 0.066 . TGME49_231130 601 DKNAAKR|NQ 0.179 . TGME49_231130 618 ADELHAR|LE 0.085 . TGME49_231130 621 LHARLEK|LV 0.154 . TGME49_231130 654 LSVIETR|PV 0.097 . TGME49_231130 705 AGAGHER|PS 0.091 . TGME49_231130 708 GHERPSR|KA 0.234 . TGME49_231130 709 HERPSRK|AA 0.139 . ____________________________^_________________

  • Fasta :-

    >TGME49_231130 ATGGAACAAATCTCTCGCCTTACCCCTCGAGTTGGGCTCTGCGCTCCGGCAGAGGATTCG TCCACCAAATGGGGCCGAAGACTCTGTGATCATGTTTGGCCGACCTCATTTGGCCGAGAT AAAACGCATGAACGTTGGACGAGTGCATCTGTCGCCTCTCTCGCACGCCGTCAAGCTGCT GTCCTTTATCCCGTGGTGCTTCTCGGAATCGCCATTCTCTTCGCTCGTAGTCACTTCCTC ACAGTCGCTCAGGCGTCACCCGCCGTCGACTTTGAAGCGTTTCCCCTCCTCCAGTATGAA ACGTTTAGTGCAGGCATGTCAAAAGCTGCGCCTGTGATGCTGGGGGCTTGGGGCTCCTCG GCGTTGAACGGCGCCTTGGCGGCGGCGACGGTAATCGTGGCCGACTCAGGGCAGCAGTCT GAGGGCCCCGGGGGCGAGGGACAGGCCCCGGACGAGAAACTGCTGGAGCACCCGCTGCTT CAGCAGCAACTGCGGAGCTTGTCGAAGAAGAACATTTACATCTTTCGCGCGACTCATGTC CCTGTCGCCCTCGTCGACGCGCTCCTCGACCGCGCCCAAAATGTGCTTCTTCTCCTTCCG CCTCGCGCACCCGAGGAGACCGGAGAGTCCGGCGCGCTCGATGAGGCGCAGGTCTCCGAG GCAGAGCGCAAACGCGTGTACGCTCTCGAGCAGCGCCTGATCACCAGGTTCTCGGCGGGC GCCTGTGTCTTTGCCTTCGAAACCCCCGAGCTGGCTACTCTGTATGAAGAACTCCGGGAA CAGCAAACGCGCTTTCTCGCAAATCCAAACTCGCTCTACGCCAACTCCCTCCTGCCCGCC TTTCTCTACAAAGGCCTCGCCCCCACTGTCTCCATCCAGCGCGGGCCTCTGCCGCCCTCG CACTTCGCTGCGGGTCTGCAGAGCGCGAGCCGCCTCTCGGCGCCCCTGCAGGGACGGAAT GTCTTTGCATGGCTTCCTGGCCGCAGGCCCCAAGAGGGAGGAGCGGCCCCCACGATTGCC ATCGTGGCGCACTATGATGCATTTGCTGCTGTTCCGCATCTCGCATTCGGCGCCGAAGGA AACGGAAGTGGAGTCGCAGCGCTCATGGAGCTGGCGCGAATCTTCTCTCGTCTGTACTCG GGAGCGGATCAAGAAGACTCTCAGAGTGCGAAGGCAGGTTCTCGTGAGCCTGGGAACTAC TCGCTTCTTTTCCTTTTGGCGGACGCCGGCGCTGCAGATTTTGCCGGGGCGGCCCAGTGG CTGGCGAAGACAGAACCGAGGATTCTGGAGTCGATCACCTACGTCTTGTGCCTCGACGAC ATCGCCGCCTCGCCCCAGCTGTATCTCCACACGGCGAAAAAGTACAAAGAACCCCGTGTG CGGAAGCTTCTCCAAAGTCTGGAAACGGCGTTCGTGCAATCGGATTTGCTTCTCACCCTC GACCCGAGGAAGATCGTCGTCCAGACACCTCCCAAGCCTTTCTGGGCGCACGAACATTTC ACGATGAAGAAGGTGATTGCAGGAACTTTGTCCTCGAAGCCTCACGGCGGTGGCCTCTGG GTACGGAGCTCGATTCTCGATCAAAATTCCTCGGCGAAGTCGCGGGAGAATCTTCTGCGC GTCGTGGGAGCCCTCGCAGAAGGCCTGGCTCATTTCGTTTACGAAGTGGACGACTTTTCA GTGAACATCATTGAAGGTTCGAATCGACCTCTTGCCTCCTTCCTCCACTCCTGGCTGTCT CTTGCCTCTCGTTCTCCTCGATTCTACGCCTTCCGTCAGGCGGACAAGAACGCAGCGAAA AGAAACCAAACGCATGCACCTAGTGGAGCTTTCGCAGACGAACTGCATGCGCGGCTGGAG AAACTCGTGCCTTCTGCCCAGTCGCAAACGTTCTCGCTCCCCGCTTCTGGAACTGTCTTC ACCTATGAGCCACCGATGTTTTTGAGTGTCATCGAAACTCGCCCCGTTCTCTTTGACATC CTTTGCCTCTTCACCGCCGTCGCCTACTGCTTCACGATCTATTACTCTATTGTCGGCTGG CACTTTGTTCTGCCTGCCATCAGCAACTTGACAGCTTCAGTCGGTGCTCTCGTCGCAGGC GCAGGCCACGAGCGCCCGTCTCGAAAAGCGGCCTAG
  • Download Fasta

  • Fasta :-

    MEQISRLTPRVGLCAPAEDSSTKWGRRLCDHVWPTSFGRDKTHERWTSASVASLARRQAA VLYPVVLLGIAILFARSHFLTVAQASPAVDFEAFPLLQYETFSAGMSKAAPVMLGAWGSS ALNGALAAATVIVADSGQQSEGPGGEGQAPDEKLLEHPLLQQQLRSLSKKNIYIFRATHV PVALVDALLDRAQNVLLLLPPRAPEETGESGALDEAQVSEAERKRVYALEQRLITRFSAG ACVFAFETPELATLYEELREQQTRFLANPNSLYANSLLPAFLYKGLAPTVSIQRGPLPPS HFAAGLQSASRLSAPLQGRNVFAWLPGRRPQEGGAAPTIAIVAHYDAFAAVPHLAFGAEG NGSGVAALMELARIFSRLYSGADQEDSQSAKAGSREPGNYSLLFLLADAGAADFAGAAQW LAKTEPRILESITYVLCLDDIAASPQLYLHTAKKYKEPRVRKLLQSLETAFVQSDLLLTL DPRKIVVQTPPKPFWAHEHFTMKKVIAGTLSSKPHGGGLWVRSSILDQNSSAKSRENLLR VVGALAEGLAHFVYEVDDFSVNIIEGSNRPLASFLHSWLSLASRSPRFYAFRQADKNAAK RNQTHAPSGAFADELHARLEKLVPSAQSQTFSLPASGTVFTYEPPMFLSVIETRPVLFDI LCLFTAVAYCFTIYYSIVGWHFVLPAISNLTASVGALVAGAGHERPSRKAA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_231130168 SLRSLSKKNI0.993unspTGME49_231130168 SLRSLSKKNI0.993unspTGME49_231130168 SLRSLSKKNI0.993unspTGME49_231130380 SSRLYSGADQ0.996unspTGME49_231130534 SSSAKSRENL0.993unspTGME49_231130707 SHERPSRKAA0.997unspTGME49_2311308 TISRLTPRVG0.994unspTGME49_23113021 SAEDSSTKWG0.995unsp

TGME49_031130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India