TGME49_233310 | peptidase D, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_233310OTHER0.9998080.0001500.000042
No Results

  • Fasta :-

    >TGME49_233310 MALPSCCPSDANCTSNPISISWCGAQSSFSAPEEEPPSLRSTLEKHMRHPTGFTHTPGQE NARIEHQAHKPWLHWPATLEDVRQSEAHRHLHAYLTSYKTIAARTRQVRDAVFKAYEKGQ MSRQTVKDTERNVAAFFQGGSAADWAFYSADCDKAVFRQEQFFRYLFGVNEADVFGLLDF SRRQAVLFVPWTSPEYQRFMGPPRAAEWYMQRYGLDGAVVYKEGLQEIREELKKRHISHL LVLRGQNSDSDRLVEPPAVARDLGISSIDDSQFLYDLLAECRVHKTELERDYLRAACLVS SQGHTFVMRNIYPGMVEGQGEALFRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRP NDGVIKCGDMLLFDMGGEYGGYSTDITLSYPVNGVCSREQRVVYEAAYEAQRAVEMAMKP GVMWTDMHRLAEKKILERLLAAGVLNGPLEACIAAHLGSVFMPHGLGHLLGVDTHDVGGF SPEYPRSSEPGLCYLRTTRKLEENMVITVEPGCYFVPFLIDKALSNPTQSRLINAASLKQ YMHLGGVRLEDVVLVTSDGIENLTVVPRRLEDVEELLATRTRNGLSVETVEQKKRKAVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_233310.fa Sequence name : TGME49_233310 Sequence length : 599 VALUES OF COMPUTED PARAMETERS Coef20 : 3.962 CoefTot : -0.341 ChDiff : -8 ZoneTo : 32 KR : 0 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.329 1.529 0.163 0.585 MesoH : -0.353 0.374 -0.250 0.259 MuHd_075 : 19.876 15.691 8.511 3.639 MuHd_095 : 13.365 18.205 6.316 4.027 MuHd_100 : 14.573 14.681 5.404 3.658 MuHd_105 : 15.094 11.493 5.469 3.302 Hmax_075 : 12.425 8.400 4.422 3.897 Hmax_095 : 12.162 11.112 2.935 2.949 Hmax_100 : 12.700 9.500 3.204 3.300 Hmax_105 : 9.917 8.200 4.869 3.605 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9759 0.0241 DFMC : 0.9528 0.0472
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 599 TGME49_233310 MALPSCCPSDANCTSNPISISWCGAQSSFSAPEEEPPSLRSTLEKHMRHPTGFTHTPGQENARIEHQAHKPWLHWPATLE 80 DVRQSEAHRHLHAYLTSYKTIAARTRQVRDAVFKAYEKGQMSRQTVKDTERNVAAFFQGGSAADWAFYSADCDKAVFRQE 160 QFFRYLFGVNEADVFGLLDFSRRQAVLFVPWTSPEYQRFMGPPRAAEWYMQRYGLDGAVVYKEGLQEIREELKKRHISHL 240 LVLRGQNSDSDRLVEPPAVARDLGISSIDDSQFLYDLLAECRVHKTELERDYLRAACLVSSQGHTFVMRNIYPGMVEGQG 320 EALFRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRPNDGVIKCGDMLLFDMGGEYGGYSTDITLSYPVNGVCSREQ 400 RVVYEAAYEAQRAVEMAMKPGVMWTDMHRLAEKKILERLLAAGVLNGPLEACIAAHLGSVFMPHGLGHLLGVDTHDVGGF 480 SPEYPRSSEPGLCYLRTTRKLEENMVITVEPGCYFVPFLIDKALSNPTQSRLINAASLKQYMHLGGVRLEDVVLVTSDGI 560 ENLTVVPRRLEDVEELLATRTRNGLSVETVEQKKRKAVL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ....................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_233310 40 EEPPSLR|ST 0.110 . TGME49_233310 45 LRSTLEK|HM 0.079 . TGME49_233310 48 TLEKHMR|HP 0.124 . TGME49_233310 63 PGQENAR|IE 0.100 . TGME49_233310 70 IEHQAHK|PW 0.067 . TGME49_233310 83 ATLEDVR|QS 0.086 . TGME49_233310 89 RQSEAHR|HL 0.149 . TGME49_233310 99 AYLTSYK|TI 0.062 . TGME49_233310 104 YKTIAAR|TR 0.072 . TGME49_233310 106 TIAARTR|QV 0.175 . TGME49_233310 109 ARTRQVR|DA 0.376 . TGME49_233310 114 VRDAVFK|AY 0.098 . TGME49_233310 118 VFKAYEK|GQ 0.054 . TGME49_233310 123 EKGQMSR|QT 0.086 . TGME49_233310 127 MSRQTVK|DT 0.095 . TGME49_233310 131 TVKDTER|NV 0.116 . TGME49_233310 154 YSADCDK|AV 0.103 . TGME49_233310 158 CDKAVFR|QE 0.080 . TGME49_233310 164 RQEQFFR|YL 0.126 . TGME49_233310 182 GLLDFSR|RQ 0.070 . TGME49_233310 183 LLDFSRR|QA 0.129 . TGME49_233310 198 TSPEYQR|FM 0.132 . TGME49_233310 204 RFMGPPR|AA 0.131 . TGME49_233310 212 AEWYMQR|YG 0.084 . TGME49_233310 222 DGAVVYK|EG 0.068 . TGME49_233310 229 EGLQEIR|EE 0.073 . TGME49_233310 233 EIREELK|KR 0.057 . TGME49_233310 234 IREELKK|RH 0.085 . TGME49_233310 235 REELKKR|HI 0.296 . TGME49_233310 244 SHLLVLR|GQ 0.071 . TGME49_233310 252 QNSDSDR|LV 0.156 . TGME49_233310 261 EPPAVAR|DL 0.181 . TGME49_233310 282 DLLAECR|VH 0.068 . TGME49_233310 285 AECRVHK|TE 0.080 . TGME49_233310 290 HKTELER|DY 0.088 . TGME49_233310 294 LERDYLR|AA 0.090 . TGME49_233310 309 GHTFVMR|NI 0.114 . TGME49_233310 325 QGEALFR|AF 0.094 . TGME49_233310 335 HYAGGAR|HV 0.097 . TGME49_233310 359 HYGHAGR|PN 0.117 . TGME49_233310 366 PNDGVIK|CG 0.063 . TGME49_233310 398 VNGVCSR|EQ 0.086 . TGME49_233310 401 VCSREQR|VV 0.395 . TGME49_233310 412 AAYEAQR|AV 0.119 . TGME49_233310 419 AVEMAMK|PG 0.061 . TGME49_233310 429 MWTDMHR|LA 0.096 . TGME49_233310 433 MHRLAEK|KI 0.062 . TGME49_233310 434 HRLAEKK|IL 0.128 . TGME49_233310 438 EKKILER|LL 0.081 . TGME49_233310 486 FSPEYPR|SS 0.172 . TGME49_233310 496 PGLCYLR|TT 0.073 . TGME49_233310 499 CYLRTTR|KL 0.173 . TGME49_233310 500 YLRTTRK|LE 0.078 . TGME49_233310 522 VPFLIDK|AL 0.064 . TGME49_233310 531 SNPTQSR|LI 0.088 . TGME49_233310 539 INAASLK|QY 0.071 . TGME49_233310 548 MHLGGVR|LE 0.084 . TGME49_233310 568 NLTVVPR|RL 0.120 . TGME49_233310 569 LTVVPRR|LE 0.134 . TGME49_233310 580 EELLATR|TR 0.059 . TGME49_233310 582 LLATRTR|NG 0.090 . TGME49_233310 593 VETVEQK|KR 0.061 . TGME49_233310 594 ETVEQKK|RK 0.072 . TGME49_233310 595 TVEQKKR|KA 0.176 . TGME49_233310 596 VEQKKRK|AV 0.145 . ____________________________^_________________

  • Fasta :-

    >TGME49_233310 ATGGCGCTCCCTTCCTGTTGTCCCTCCGACGCAAACTGCACCTCCAACCCTATTTCGATC TCTTGGTGCGGTGCCCAGAGTAGCTTTTCTGCCCCTGAAGAGGAGCCCCCGTCTCTGCGG TCGACTCTCGAGAAACACATGCGGCACCCCACGGGATTTACACACACTCCAGGACAAGAG AATGCGCGAATCGAGCACCAGGCACACAAGCCCTGGCTGCATTGGCCCGCGACTCTGGAA GATGTCCGGCAGAGCGAGGCTCACAGACACCTTCATGCGTATCTGACGAGTTACAAAACA ATAGCTGCGAGGACGCGTCAAGTTCGCGACGCTGTATTCAAGGCCTATGAGAAGGGGCAG ATGTCCAGACAAACTGTGAAAGACACCGAGCGGAATGTGGCTGCTTTCTTCCAGGGTGGC TCTGCTGCTGATTGGGCGTTTTACTCAGCTGACTGCGACAAAGCCGTGTTTCGACAAGAG CAGTTCTTCCGATATCTCTTTGGCGTCAATGAAGCCGACGTATTCGGATTGCTCGACTTC AGCCGACGCCAGGCGGTGCTGTTTGTGCCGTGGACTTCACCCGAGTACCAAAGATTCATG GGACCCCCGCGGGCGGCTGAGTGGTACATGCAGCGGTACGGCCTTGACGGAGCCGTCGTC TACAAAGAGGGTCTCCAGGAAATTCGAGAGGAGCTGAAAAAAAGACACATTAGTCACCTC CTTGTTCTGCGTGGACAAAACAGCGACAGCGATCGACTAGTGGAGCCTCCAGCTGTCGCG CGTGACCTCGGCATTTCTTCGATCGATGATTCTCAGTTTCTCTACGATCTCCTGGCAGAA TGTCGGGTTCATAAGACAGAACTGGAACGCGACTATCTTCGAGCTGCGTGCCTCGTTTCG TCTCAAGGACACACGTTTGTGATGCGGAATATTTACCCTGGGATGGTAGAAGGCCAGGGA GAGGCCCTTTTCCGTGCCTTCGTGCACTACGCTGGCGGAGCTAGACACGTGGCCTACGAC TGTATTTGTTGCGCCGGGCCTCACGGAGCGATACTACACTACGGCCACGCTGGGCGCCCG AACGACGGAGTGATCAAGTGCGGCGATATGCTTTTGTTCGACATGGGGGGAGAGTACGGT GGATACTCGACAGATATCACACTCAGCTACCCCGTGAACGGCGTATGCAGCCGGGAACAG CGCGTGGTGTATGAGGCCGCCTACGAGGCCCAGAGAGCTGTGGAAATGGCCATGAAGCCG GGAGTCATGTGGACGGACATGCACCGGTTGGCGGAGAAGAAAATTCTGGAGAGGCTTTTG GCTGCGGGAGTTCTCAATGGGCCTTTGGAAGCATGCATTGCCGCGCATTTGGGAAGTGTG TTCATGCCCCACGGCTTAGGGCACCTTCTCGGCGTGGACACGCATGACGTGGGCGGCTTC TCGCCTGAGTATCCCCGAAGCTCGGAACCCGGTCTCTGCTACCTGCGAACTACGCGAAAA CTCGAAGAAAACATGGTCATCACGGTGGAGCCAGGTTGTTATTTTGTACCATTTCTCATT GACAAAGCTCTTAGCAACCCGACCCAAAGTCGCTTGATCAACGCAGCCTCCTTGAAGCAG TACATGCATCTCGGAGGAGTTAGGCTTGAAGACGTCGTCCTTGTCACTTCTGATGGCATC GAGAACCTCACGGTCGTGCCGCGTCGCTTGGAAGATGTCGAAGAGCTTCTGGCTACCCGA ACAAGAAACGGACTCTCAGTTGAAACAGTGGAACAGAAAAAGCGAAAGGCAGTTTTGTAG
  • Download Fasta

  • Fasta :-

    MALPSCCPSDANCTSNPISISWCGAQSSFSAPEEEPPSLRSTLEKHMRHPTGFTHTPGQE NARIEHQAHKPWLHWPATLEDVRQSEAHRHLHAYLTSYKTIAARTRQVRDAVFKAYEKGQ MSRQTVKDTERNVAAFFQGGSAADWAFYSADCDKAVFRQEQFFRYLFGVNEADVFGLLDF SRRQAVLFVPWTSPEYQRFMGPPRAAEWYMQRYGLDGAVVYKEGLQEIREELKKRHISHL LVLRGQNSDSDRLVEPPAVARDLGISSIDDSQFLYDLLAECRVHKTELERDYLRAACLVS SQGHTFVMRNIYPGMVEGQGEALFRAFVHYAGGARHVAYDCICCAGPHGAILHYGHAGRP NDGVIKCGDMLLFDMGGEYGGYSTDITLSYPVNGVCSREQRVVYEAAYEAQRAVEMAMKP GVMWTDMHRLAEKKILERLLAAGVLNGPLEACIAAHLGSVFMPHGLGHLLGVDTHDVGGF SPEYPRSSEPGLCYLRTTRKLEENMVITVEPGCYFVPFLIDKALSNPTQSRLINAASLKQ YMHLGGVRLEDVVLVTSDGIENLTVVPRRLEDVEELLATRTRNGLSVETVEQKKRKAVL

  • title: active site
  • coordinates: H353,D374,D385,H468,E510,E550
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_233310266 SDLGISSIDD0.991unspTGME49_233310266 SDLGISSIDD0.991unspTGME49_233310266 SDLGISSIDD0.991unspTGME49_233310481 SVGGFSPEYP0.992unspTGME49_23331030 SQSSFSAPEE0.992unspTGME49_233310125 TMSRQTVKDT0.995unsp

TGME49_033310      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India