TGME49_236210 | peptidase M16 family potein, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_236210mTP0.0237760.0000470.976177CS pos: 37-38. GFF-SA. Pr: 0.4463
No Results

  • Fasta :-

    >TGME49_236210 MMFRFLPRVASGASSLSVSQRRLRASFSSSLQSRGFFSAAPAAATAGVSPLARSVDAAIP EEAFNQPPTLTTTLPNGIRVATQRLPFHQTATVGVWIDSGSRYDTKETNGAAHFLEHMTF KGTKRRSRIQLEQEIENMGAHLNAYTSREQTVYYAKAFKKDIPQCVDILSDILLNSTIDE EAVQMEKHVILREMEEVERQTEEVIFDRLHTTAFRDSPLGYTILGPEENIRNMTREHILE YINRNYTSDRMVVAAAGDVDHKELTALVEKHFAGLPQPKRSKIILPTEKPFFCGSELLHR NDDMGPTAHVAVGFEGVPWKSPDAVTFMLMQAIVGSYRKHDEGIVPGKVSANATVRNVCN KMTVGCADMFSAFNTCYSDTGLFGFYAQCDEVALEHCVMEIMFGITSLSYAVTDEEVERA KAQLKTQLLGHLDSTTAVAEDIGRQMLAYGRRMPLAEFLKRLEVIDAEEVKRVAWKYLHD AEVAVAGLGPLFGMPQLINLRRATFWLRY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_236210.fa Sequence name : TGME49_236210 Sequence length : 509 VALUES OF COMPUTED PARAMETERS Coef20 : 4.801 CoefTot : 2.602 ChDiff : -7 ZoneTo : 55 KR : 7 DE : 0 CleavSite : 31 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.588 1.406 0.218 0.592 MesoH : -0.145 0.436 -0.221 0.239 MuHd_075 : 29.071 15.783 5.684 8.006 MuHd_095 : 32.564 20.842 7.240 7.813 MuHd_100 : 32.047 21.176 6.910 8.169 MuHd_105 : 35.531 21.316 8.015 9.103 Hmax_075 : 13.200 14.583 2.214 4.632 Hmax_095 : 17.500 17.500 2.361 5.580 Hmax_100 : 17.900 17.900 2.957 6.240 Hmax_105 : 15.750 20.100 2.841 5.600 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0115 0.9885 DFMC : 0.0056 0.9944 This protein is probably imported in mitochondria. f(Ser) = 0.2364 f(Arg) = 0.1273 CMi = 0.95238 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 509 TGME49_236210 MMFRFLPRVASGASSLSVSQRRLRASFSSSLQSRGFFSAAPAAATAGVSPLARSVDAAIPEEAFNQPPTLTTTLPNGIRV 80 ATQRLPFHQTATVGVWIDSGSRYDTKETNGAAHFLEHMTFKGTKRRSRIQLEQEIENMGAHLNAYTSREQTVYYAKAFKK 160 DIPQCVDILSDILLNSTIDEEAVQMEKHVILREMEEVERQTEEVIFDRLHTTAFRDSPLGYTILGPEENIRNMTREHILE 240 YINRNYTSDRMVVAAAGDVDHKELTALVEKHFAGLPQPKRSKIILPTEKPFFCGSELLHRNDDMGPTAHVAVGFEGVPWK 320 SPDAVTFMLMQAIVGSYRKHDEGIVPGKVSANATVRNVCNKMTVGCADMFSAFNTCYSDTGLFGFYAQCDEVALEHCVME 400 IMFGITSLSYAVTDEEVERAKAQLKTQLLGHLDSTTAVAEDIGRQMLAYGRRMPLAEFLKRLEVIDAEEVKRVAWKYLHD 480 AEVAVAGLGPLFGMPQLINLRRATFWLRY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_236210 4 ---MMFR|FL 0.096 . TGME49_236210 8 MFRFLPR|VA 0.113 . TGME49_236210 21 SLSVSQR|RL 0.176 . TGME49_236210 22 LSVSQRR|LR 0.093 . TGME49_236210 24 VSQRRLR|AS 0.228 . TGME49_236210 34 SSSLQSR|GF 0.143 . TGME49_236210 53 GVSPLAR|SV 0.476 . TGME49_236210 79 TLPNGIR|VA 0.097 . TGME49_236210 84 IRVATQR|LP 0.109 . TGME49_236210 102 WIDSGSR|YD 0.073 . TGME49_236210 106 GSRYDTK|ET 0.077 . TGME49_236210 121 LEHMTFK|GT 0.071 . TGME49_236210 124 MTFKGTK|RR 0.064 . TGME49_236210 125 TFKGTKR|RS 0.210 . TGME49_236210 126 FKGTKRR|SR 0.327 . TGME49_236210 128 GTKRRSR|IQ 0.236 . TGME49_236210 148 LNAYTSR|EQ 0.091 . TGME49_236210 156 QTVYYAK|AF 0.066 . TGME49_236210 159 YYAKAFK|KD 0.064 . TGME49_236210 160 YAKAFKK|DI 0.167 . TGME49_236210 187 EAVQMEK|HV 0.067 . TGME49_236210 192 EKHVILR|EM 0.141 . TGME49_236210 199 EMEEVER|QT 0.095 . TGME49_236210 208 EEVIFDR|LH 0.085 . TGME49_236210 215 LHTTAFR|DS 0.085 . TGME49_236210 231 GPEENIR|NM 0.079 . TGME49_236210 235 NIRNMTR|EH 0.076 . TGME49_236210 244 ILEYINR|NY 0.085 . TGME49_236210 250 RNYTSDR|MV 0.166 . TGME49_236210 262 AGDVDHK|EL 0.061 . TGME49_236210 270 LTALVEK|HF 0.058 . TGME49_236210 279 AGLPQPK|RS 0.071 . TGME49_236210 280 GLPQPKR|SK 0.226 . TGME49_236210 282 PQPKRSK|II 0.062 . TGME49_236210 289 IILPTEK|PF 0.058 . TGME49_236210 300 GSELLHR|ND 0.092 . TGME49_236210 320 FEGVPWK|SP 0.108 . TGME49_236210 338 AIVGSYR|KH 0.088 . TGME49_236210 339 IVGSYRK|HD 0.093 . TGME49_236210 348 EGIVPGK|VS 0.060 . TGME49_236210 356 SANATVR|NV 0.145 . TGME49_236210 361 VRNVCNK|MT 0.087 . TGME49_236210 419 TDEEVER|AK 0.097 . TGME49_236210 421 EEVERAK|AQ 0.059 . TGME49_236210 425 RAKAQLK|TQ 0.058 . TGME49_236210 444 VAEDIGR|QM 0.079 . TGME49_236210 451 QMLAYGR|RM 0.066 . TGME49_236210 452 MLAYGRR|MP 0.118 . TGME49_236210 460 PLAEFLK|RL 0.065 . TGME49_236210 461 LAEFLKR|LE 0.101 . TGME49_236210 471 IDAEEVK|RV 0.071 . TGME49_236210 472 DAEEVKR|VA 0.236 . TGME49_236210 476 VKRVAWK|YL 0.110 . TGME49_236210 501 PQLINLR|RA 0.071 . TGME49_236210 502 QLINLRR|AT 0.142 . TGME49_236210 508 RATFWLR|Y- 0.088 . ____________________________^_________________

  • Fasta :-

    >TGME49_236210 GAACTTTTACTTTTCGCGGACTTGGTCTTTTTTGGTTCGAACGACAGCCGGGAGAACGCG CTGCGAGCTCGAGGATTCCACCTCCACTCCGCCTCCGCAAACGCGGCTCTGCGCGCCTGC TGTGCGAATCCAGAGTCGTTCCCTCTCTAGGGAAAACAGGCTCTGCTCTTGTGCGTTTCT CCTCGTCTGTCTCCGACATTTCTCTTCTTTTCTCTCCTTCTCCTCTCTTCTTTTTCTGCC CTCTCCCACCTCCCGTCGCTCTCGCAGCCGGTGCATGCGGTCACCCTAGCGCGCTGCTTG GGTACTCAAGGACATCCATACAAACGAATAAAAACTACCCAGAGTGCCTCCTCTCCCGAT CTCTTCCTTCTTCTCTCACTCCTGCTCGGTTTCTTTCTGTCTTCTCTCGTCTCCACCGGC GACTTGCTGATCTCTCTCCCCTTCTTCTCCATGATGTTCCGCTTCCTGCCGCGGGTCGCC TCTGGGGCCTCGTCCCTGAGCGTTTCTCAGAGGCGCCTGCGCGCTTCCTTCTCTTCTTCT CTCCAGTCTCGCGGCTTCTTCAGCGCAGCTCCAGCCGCAGCGACAGCTGGAGTTAGTCCT CTGGCTCGCTCCGTAGACGCGGCGATCCCTGAAGAAGCGTTTAACCAGCCGCCCACGCTC ACCACGACTCTCCCCAATGGCATTCGCGTTGCGACGCAGCGCCTGCCCTTCCACCAGACG GCGACGGTCGGCGTCTGGATCGACAGTGGAAGTCGCTACGATACGAAGGAGACCAACGGA GCTGCCCATTTCCTCGAGCACATGACTTTCAAGGGGACAAAGCGAAGGTCTCGAATCCAA CTCGAACAAGAGATCGAAAACATGGGTGCCCACCTCAATGCCTACACGTCCCGCGAACAG ACAGTCTACTACGCGAAGGCCTTCAAGAAAGATATCCCCCAGTGCGTTGACATTCTCTCG GACATCTTGCTGAACTCGACGATCGACGAAGAGGCGGTCCAGATGGAGAAACACGTAATC CTCCGCGAGATGGAGGAAGTCGAACGGCAAACCGAAGAGGTCATCTTCGATCGCCTCCAC ACCACGGCGTTTCGAGACAGCCCCCTGGGGTATACGATTCTGGGTCCCGAGGAGAACATC CGGAACATGACGCGCGAGCACATTTTGGAGTACATCAACCGCAATTATACGAGCGACCGG ATGGTAGTTGCAGCAGCGGGTGACGTCGATCACAAAGAGTTGACGGCGTTGGTGGAGAAG CATTTCGCTGGCTTGCCGCAGCCGAAGAGAAGCAAGATCATTCTTCCGACCGAGAAACCG TTCTTCTGCGGCTCGGAACTTCTTCACAGAAACGACGACATGGGACCGACTGCTCACGTC GCTGTCGGCTTCGAAGGCGTTCCCTGGAAGTCGCCCGACGCCGTGACCTTCATGTTGATG CAGGCGATCGTGGGCAGCTACCGGAAGCACGACGAAGGCATCGTGCCTGGAAAAGTTTCG GCCAACGCGACTGTGCGAAACGTCTGCAACAAAATGACGGTCGGATGCGCAGACATGTTC TCTGCGTTCAACACCTGCTACAGCGACACTGGCCTCTTCGGCTTCTACGCCCAGTGCGAC GAAGTAGCTCTCGAGCACTGCGTCATGGAAATCATGTTCGGCATCACTTCTCTCTCATAC GCTGTAACTGACGAAGAAGTCGAGCGCGCGAAAGCACAGCTGAAAACGCAGCTGCTCGGT CACCTGGACTCCACGACGGCAGTGGCAGAAGACATCGGTCGGCAGATGCTGGCGTACGGA CGCCGCATGCCGCTCGCCGAATTCTTGAAGAGACTGGAGGTGATCGACGCCGAAGAGGTC AAGCGCGTTGCGTGGAAGTACCTGCACGATGCTGAGGTGGCGGTCGCCGGCCTAGGCCCT CTGTTCGGGATGCCTCAGCTCATCAACCTCCGCCGCGCTACCTTCTGGCTGCGTTACTAA AAGACGACGCAGCCTTCTGCAGACGCAGCGTTTTCCAGCGTCTCGGCAGCTAAAGCTCAC ACGACGGCGACGCATGCGACAGAAGCCGCGGAAGACTGAACGTTCTCGCGTTTCGAAAGG ACCGAGCTCCCGTCGCTCCGAAGAGAACGGGGGGAAGCCGGGGAGACTGTATCCCGTTGC TCTCCTCGCCTCGAGGTCTGCAGAACTTTGAAGAAGAGGTCATGTTCGTTTTATGCGTTC GCCGTTGCGCAGACGGAGGACGGAGGGGCAAGGCGGCGTTGACAGAGGGAGCTGGGCGGA CCCAGGGGAGAGACGTTTCGAATGAGAAGTACATCGGAGCGCGCGACAGCGACCGGGAGA AGCAGTGTACAGACAGCTCGACGCCAGGCGTCGGTGTGCGCGCAGTTCTGTTGCTTTCCG TTTCTTATCTGTTTCGCCTCCCCGGCTTCTTCCACGCGTTTTTCCACCTGTCGTGTGGTG TTTCTTCTCTCCTTTGAACCTCGCCGCCTACGCGTTCCTCAAGGGTCGCTGTCGCGCTCA GTTTCGCGTGTGGTTTCGAGTTCCTCGCGATCTCTTCTTGCGTTCTCGAAATTGCCGAGA GGGCAAATGTGACGACGCTTCTCGTTCAACTCAACACTGTCGACATCTGGACGGACGCCG CGCCGGACACGCAAGACGCACTGGGGGCAGTAAACGTTCACTCGAGACCGCTGCAGCCTC TACGGTCGCGGGGGGCGTCGTTCGCAGGCGCTTCGGACGCCTCGCGAGACTCCCTGAGCC GTGACTCAGCGCGATCCTCTGACTTAACTGTGCGTCGCTGACAGCCGGTCGCGGAGGACT CCTGGGTCCTCCCAAGGAGCGCTTCTTCAGCGAAAGTGAACTCTTTCGCGCTCCCCTCGC GCAGAAGGCGCGCGGGCGGCAAACGCTGCTGTGAGACAACGCCGAGTCGCTTCCAAGAAA GCCATTCTTGAGAGACAGTCGTCACACACCAACATCGAAACTCAGCAAAGTCGCCGCAAA CCACAACGCTGAAAAAGGCGACGCGTGCGTCCCTACCCCGTCCTGCCCAAAGAGATTGTT AGACCCAAC
  • Download Fasta

  • Fasta :-

    MMFRFLPRVASGASSLSVSQRRLRASFSSSLQSRGFFSAAPAAATAGVSPLARSVDAAIP EEAFNQPPTLTTTLPNGIRVATQRLPFHQTATVGVWIDSGSRYDTKETNGAAHFLEHMTF KGTKRRSRIQLEQEIENMGAHLNAYTSREQTVYYAKAFKKDIPQCVDILSDILLNSTIDE EAVQMEKHVILREMEEVERQTEEVIFDRLHTTAFRDSPLGYTILGPEENIRNMTREHILE YINRNYTSDRMVVAAAGDVDHKELTALVEKHFAGLPQPKRSKIILPTEKPFFCGSELLHR NDDMGPTAHVAVGFEGVPWKSPDAVTFMLMQAIVGSYRKHDEGIVPGKVSANATVRNVCN KMTVGCADMFSAFNTCYSDTGLFGFYAQCDEVALEHCVMEIMFGITSLSYAVTDEEVERA KAQLKTQLLGHLDSTTAVAEDIGRQMLAYGRRMPLAEFLKRLEVIDAEEVKRVAWKYLHD AEVAVAGLGPLFGMPQLINLRRATFWLRY

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_236210101 SIDSGSRYDT0.99unspTGME49_236210101 SIDSGSRYDT0.99unspTGME49_236210101 SIDSGSRYDT0.99unspTGME49_236210127 STKRRSRIQL0.996unspTGME49_236210217 SAFRDSPLGY0.993unspTGME49_23621019 SSLSVSQRRL0.995unspTGME49_23621026 SRLRASFSSS0.991unsp

TGME49_036210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India