TGME49_237894 | OTU family cysteine protease

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_IDPredictionOTHERSPmTPCS_Position
TGME49_237894OTHER0.8457780.0004460.153776
No Results

  • Fasta :-

    >TGME49_237894 MLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSVSY ALLGTEDAHAEIRQEVAHYLRGNFSRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYK GYPLAEDELKLNWVIRLGDARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSH AVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVVEKVKPR
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_237894.fa Sequence name : TGME49_237894 Sequence length : 219 VALUES OF COMPUTED PARAMETERS Coef20 : 3.798 CoefTot : -1.527 ChDiff : 0 ZoneTo : 32 KR : 4 DE : 1 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.600 1.406 0.116 0.585 MesoH : -1.208 0.196 -0.461 0.142 MuHd_075 : 38.387 20.251 9.210 7.657 MuHd_095 : 36.745 24.430 9.200 9.113 MuHd_100 : 43.530 27.836 12.087 10.313 MuHd_105 : 42.180 26.836 12.766 9.565 Hmax_075 : 11.200 7.700 2.072 4.457 Hmax_095 : 15.663 14.600 2.942 5.840 Hmax_100 : 15.500 14.700 3.698 5.340 Hmax_105 : 13.400 14.117 3.616 3.439 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2701 0.7299 DFMC : 0.6103 0.3897
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 219 TGME49_237894 MLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSVSYALLGTEDAHAEIRQEVAHYL 80 RGNFSRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYKGYPLAEDELKLNWVIRLGDARYRIWGDECTLAVMAEMYNI 160 RIVVEQQEGDGRRATKMGSHAVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVVEKVKPR 240 ................................................................................ 80 ................................................................................ 160 ........................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_237894 13 PHPQWCR|RF 0.072 . TGME49_237894 14 HPQWCRR|FA 0.274 . TGME49_237894 20 RFAYDFK|TP 0.066 . TGME49_237894 24 DFKTPAK|SL 0.094 . TGME49_237894 44 DAVVVER|HR 0.075 . TGME49_237894 46 VVVERHR|VA 0.089 . TGME49_237894 56 DGNCQFR|SV 0.312 . TGME49_237894 73 DAHAEIR|QE 0.076 . TGME49_237894 81 EVAHYLR|GN 0.088 . TGME49_237894 86 LRGNFSR|LS 0.114 . TGME49_237894 102 LEEDEGR|MA 0.083 . TGME49_237894 105 DEGRMAR|LD 0.245 . TGME49_237894 108 RMARLDK|KY 0.130 . TGME49_237894 109 MARLDKK|YR 0.089 . TGME49_237894 111 RLDKKYR|VR 0.082 . TGME49_237894 113 DKKYRVR|IP 0.084 . TGME49_237894 117 RVRIPYK|TY 0.065 . TGME49_237894 120 IPYKTYK|GY 0.079 . TGME49_237894 130 LAEDELK|LN 0.062 . TGME49_237894 136 KLNWVIR|LG 0.106 . TGME49_237894 141 IRLGDAR|YR 0.100 . TGME49_237894 143 LGDARYR|IW 0.104 . TGME49_237894 161 AEMYNIR|IV 0.120 . TGME49_237894 172 QQEGDGR|RA 0.096 . TGME49_237894 173 QEGDGRR|AT 0.163 . TGME49_237894 176 DGRRATK|MG 0.201 . TGME49_237894 207 LIYDLQR|QH 0.093 . TGME49_237894 215 HYDVVEK|VK 0.058 . TGME49_237894 217 DVVEKVK|PR 0.063 . TGME49_237894 219 VEKVKPR|-- 0.108 . ____________________________^_________________

  • Fasta :-

    >TGME49_237894 ATGTTGCCCTTTATCGCCCCTCATCCGCAATGGTGCCGTCGCTTCGCCTATGACTTTAAA ACGCCAGCGAAGAGTCTGTCCATGGTGCCGCAACCCGAGCTGTCATTCTACGACGCGGTG GTTGTGGAGCGGCACCGGGTTGCTCCTGACGGAAATTGTCAATTCCGTTCCGTCAGCTAC GCGTTGCTAGGCACAGAGGATGCCCATGCGGAAATCCGGCAAGAGGTGGCGCACTATCTG AGGGGCAACTTTAGTCGGCTTAGCTGGCTGATAAACCCGGACACACTGGAGGAAGACGAG GGGAGAATGGCTCGACTCGACAAGAAATACAGAGTCAGAATTCCGTACAAAACCTACAAA GGTTATCCCTTGGCAGAAGACGAGCTCAAACTTAATTGGGTTATCAGGCTTGGAGACGCA CGATACAGGATCTGGGGTGACGAGTGCACTCTCGCTGTGATGGCGGAGATGTACAACATC CGGATCGTTGTTGAGCAACAAGAAGGCGACGGGCGTCGGGCAACCAAAATGGGTTCGCAT GCAGTCCAGGTTATCATACCATACGATGTGGTTCCTGAGGCATGCATCCCGACGATTTTC CTGATCTACGACCTTCAGCGTCAACACTACGACGTGGTCGAAAAGGTCAAACCAAGGTGA AAAACGTCACATGCCCTAGCTCAACAACCTCCT
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  • Fasta :-

    MLPFIAPHPQWCRRFAYDFKTPAKSLSMVPQPELSFYDAVVVERHRVAPDGNCQFRSVSY ALLGTEDAHAEIRQEVAHYLRGNFSRLSWLINPDTLEEDEGRMARLDKKYRVRIPYKTYK GYPLAEDELKLNWVIRLGDARYRIWGDECTLAVMAEMYNIRIVVEQQEGDGRRATKMGSH AVQVIIPYDVVPEACIPTIFLIYDLQRQHYDVVEKVKPR

    No Results
No Results
No Results
IDSitePeptideScoreMethod
TGME49_23789435 SQPELSFYDA0.993unsp

TGME49_037894      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India