TGME49_240830 | hydrolase, alpha/beta fold family protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_240830SP0.1008450.8990690.000087CS pos: 27-28. SCA-SL. Pr: 0.3915
No Results

  • Fasta :-

    >TGME49_240830 MKQSPSFSHFARLLFAFLFLLFSPSCASLLPSSLPLGRLPSETRVSLHAGAKHKFHRSAL AFADPCFLPFLAPRSETVFRLPNVSTLLRDTPKMRLSACSSLPRSLSSAFVVPLSSLSSL SSLSSLFPLSSPSPLSSCFSRARLSREVDWSCSVRRAGQRDSSEPRNHATPLQSVPVSSL SHSLCSPSFARAGISSLRATEGCRRAEEAADQEREESSAFFSADAPALSFEVLQSRAKPV REDAPALLVVHGLLGSRRNMRSFSALLNSPKIVAVDLRNHGDSPWRDQMRVSDLGRDLLY MLHSKPDLFSSSALASSSSLLSAPRDVVLVGHSLGGLAAMYAALRAEEASRGRDALPRVK GLVVLDVAPVDYSGSRQAQQPVSSQTVVNLLCDLPMSAFEDRRQLERTLGATDPPLPRAM IQWLMTAVRERREKKPLDGGSIAWRAAGRPSRTADKTLKKDEKIRLEWRMNLLAIKQMLK TKQLRWPSEEFDAERRRKSRVSGCRDTAADAPVDAEGELGRSTAAEGEQRAAHAFEGPAL FLRGSNSQYVDVKRDWDTILRYFPNAEHRTVQNAGHWLHAEQPVQTAELINQFLAKV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_240830.fa Sequence name : TGME49_240830 Sequence length : 597 VALUES OF COMPUTED PARAMETERS Coef20 : 4.583 CoefTot : 0.916 ChDiff : 19 ZoneTo : 63 KR : 7 DE : 1 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.259 2.124 0.410 0.736 MesoH : 0.148 0.595 -0.137 0.256 MuHd_075 : 33.546 22.357 10.627 8.121 MuHd_095 : 24.501 18.488 6.859 6.550 MuHd_100 : 29.378 19.505 8.195 6.657 MuHd_105 : 32.850 21.105 8.886 7.449 Hmax_075 : 13.900 13.200 1.401 4.940 Hmax_095 : 22.487 23.600 4.399 8.100 Hmax_100 : 12.000 21.600 1.762 7.520 Hmax_105 : 18.900 17.000 2.675 6.240 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2404 0.7596 DFMC : 0.2115 0.7885 This protein is probably imported in chloroplast. f(Ser) = 0.1746 f(Arg) = 0.0635 CMi = 1.09890 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 597 TGME49_240830 MKQSPSFSHFARLLFAFLFLLFSPSCASLLPSSLPLGRLPSETRVSLHAGAKHKFHRSALAFADPCFLPFLAPRSETVFR 80 LPNVSTLLRDTPKMRLSACSSLPRSLSSAFVVPLSSLSSLSSLSSLFPLSSPSPLSSCFSRARLSREVDWSCSVRRAGQR 160 DSSEPRNHATPLQSVPVSSLSHSLCSPSFARAGISSLRATEGCRRAEEAADQEREESSAFFSADAPALSFEVLQSRAKPV 240 REDAPALLVVHGLLGSRRNMRSFSALLNSPKIVAVDLRNHGDSPWRDQMRVSDLGRDLLYMLHSKPDLFSSSALASSSSL 320 LSAPRDVVLVGHSLGGLAAMYAALRAEEASRGRDALPRVKGLVVLDVAPVDYSGSRQAQQPVSSQTVVNLLCDLPMSAFE 400 DRRQLERTLGATDPPLPRAMIQWLMTAVRERREKKPLDGGSIAWRAAGRPSRTADKTLKKDEKIRLEWRMNLLAIKQMLK 480 TKQLRWPSEEFDAERRRKSRVSGCRDTAADAPVDAEGELGRSTAAEGEQRAAHAFEGPALFLRGSNSQYVDVKRDWDTIL 560 RYFPNAEHRTVQNAGHWLHAEQPVQTAELINQFLAKV 640 ................................................................................ 80 .................................................................P.............. 160 ................................................................................ 240 ....................P........................................................... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ..................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ TGME49_240830 2 -----MK|QS 0.060 . TGME49_240830 12 SFSHFAR|LL 0.165 . TGME49_240830 38 SSLPLGR|LP 0.084 . TGME49_240830 44 RLPSETR|VS 0.077 . TGME49_240830 52 SLHAGAK|HK 0.065 . TGME49_240830 54 HAGAKHK|FH 0.080 . TGME49_240830 57 AKHKFHR|SA 0.242 . TGME49_240830 74 LPFLAPR|SE 0.103 . TGME49_240830 80 RSETVFR|LP 0.082 . TGME49_240830 89 NVSTLLR|DT 0.110 . TGME49_240830 93 LLRDTPK|MR 0.063 . TGME49_240830 95 RDTPKMR|LS 0.072 . TGME49_240830 104 ACSSLPR|SL 0.170 . TGME49_240830 141 LSSCFSR|AR 0.105 . TGME49_240830 143 SCFSRAR|LS 0.091 . TGME49_240830 146 SRARLSR|EV 0.596 *ProP* TGME49_240830 155 DWSCSVR|RA 0.147 . TGME49_240830 156 WSCSVRR|AG 0.108 . TGME49_240830 160 VRRAGQR|DS 0.135 . TGME49_240830 166 RDSSEPR|NH 0.101 . TGME49_240830 191 CSPSFAR|AG 0.099 . TGME49_240830 198 AGISSLR|AT 0.105 . TGME49_240830 204 RATEGCR|RA 0.092 . TGME49_240830 205 ATEGCRR|AE 0.109 . TGME49_240830 214 EAADQER|EE 0.095 . TGME49_240830 236 FEVLQSR|AK 0.078 . TGME49_240830 238 VLQSRAK|PV 0.075 . TGME49_240830 241 SRAKPVR|ED 0.135 . TGME49_240830 257 HGLLGSR|RN 0.068 . TGME49_240830 258 GLLGSRR|NM 0.092 . TGME49_240830 261 GSRRNMR|SF 0.633 *ProP* TGME49_240830 271 ALLNSPK|IV 0.076 . TGME49_240830 278 IVAVDLR|NH 0.118 . TGME49_240830 286 HGDSPWR|DQ 0.089 . TGME49_240830 290 PWRDQMR|VS 0.112 . TGME49_240830 296 RVSDLGR|DL 0.140 . TGME49_240830 305 LYMLHSK|PD 0.055 . TGME49_240830 325 SLLSAPR|DV 0.149 . TGME49_240830 345 AMYAALR|AE 0.081 . TGME49_240830 351 RAEEASR|GR 0.088 . TGME49_240830 353 EEASRGR|DA 0.109 . TGME49_240830 358 GRDALPR|VK 0.103 . TGME49_240830 360 DALPRVK|GL 0.057 . TGME49_240830 376 VDYSGSR|QA 0.092 . TGME49_240830 402 MSAFEDR|RQ 0.076 . TGME49_240830 403 SAFEDRR|QL 0.161 . TGME49_240830 407 DRRQLER|TL 0.108 . TGME49_240830 418 TDPPLPR|AM 0.107 . TGME49_240830 429 WLMTAVR|ER 0.076 . TGME49_240830 431 MTAVRER|RE 0.089 . TGME49_240830 432 TAVRERR|EK 0.388 . TGME49_240830 434 VRERREK|KP 0.130 . TGME49_240830 435 RERREKK|PL 0.478 . TGME49_240830 445 GGSIAWR|AA 0.142 . TGME49_240830 449 AWRAAGR|PS 0.120 . TGME49_240830 452 AAGRPSR|TA 0.391 . TGME49_240830 456 PSRTADK|TL 0.066 . TGME49_240830 459 TADKTLK|KD 0.068 . TGME49_240830 460 ADKTLKK|DE 0.101 . TGME49_240830 463 TLKKDEK|IR 0.061 . TGME49_240830 465 KKDEKIR|LE 0.078 . TGME49_240830 469 KIRLEWR|MN 0.091 . TGME49_240830 476 MNLLAIK|QM 0.054 . TGME49_240830 480 AIKQMLK|TK 0.053 . TGME49_240830 482 KQMLKTK|QL 0.067 . TGME49_240830 485 LKTKQLR|WP 0.108 . TGME49_240830 495 EEFDAER|RR 0.064 . TGME49_240830 496 EFDAERR|RK 0.092 . TGME49_240830 497 FDAERRR|KS 0.147 . TGME49_240830 498 DAERRRK|SR 0.295 . TGME49_240830 500 ERRRKSR|VS 0.379 . TGME49_240830 505 SRVSGCR|DT 0.114 . TGME49_240830 521 AEGELGR|ST 0.161 . TGME49_240830 530 AAEGEQR|AA 0.117 . TGME49_240830 543 GPALFLR|GS 0.111 . TGME49_240830 553 SQYVDVK|RD 0.061 . TGME49_240830 554 QYVDVKR|DW 0.390 . TGME49_240830 561 DWDTILR|YF 0.078 . TGME49_240830 569 FPNAEHR|TV 0.183 . TGME49_240830 596 INQFLAK|V- 0.075 . ____________________________^_________________

  • Fasta :-

    >TGME49_240830 ATGAAGCAGTCACCGTCCTTCTCCCATTTCGCGCGCTTGCTTTTCGCTTTCCTCTTTCTG CTCTTCTCTCCGAGTTGTGCGTCTCTTCTTCCCTCCTCTCTCCCGCTCGGCAGGCTTCCG AGTGAGACACGGGTGTCTCTACACGCGGGCGCGAAGCACAAGTTTCACCGAAGCGCGCTC GCTTTTGCAGATCCCTGTTTCTTGCCGTTTCTGGCTCCTCGCTCGGAAACCGTTTTCAGG CTCCCAAACGTCTCCACACTGCTGCGCGACACCCCAAAAATGAGGCTCTCTGCATGCAGT AGCCTTCCTCGTTCTCTCTCTTCTGCCTTTGTGGTTCCTCTCTCCTCTCTCTCTTCTCTC TCTTCTCTCTCTTCTCTCTTTCCTCTCTCTTCTCCTTCACCTCTTTCTTCTTGCTTTTCC AGAGCGCGTCTTTCGCGAGAAGTAGATTGGAGCTGCTCTGTCCGGCGCGCAGGTCAGCGC GATTCCTCAGAGCCCAGAAATCATGCAACGCCTCTGCAGAGCGTTCCTGTCTCTTCTCTC TCTCATTCGCTCTGCTCTCCTTCTTTCGCGCGCGCCGGCATCTCTTCGTTGCGAGCGACG GAAGGCTGTCGGAGAGCAGAGGAGGCGGCCGACCAAGAGCGAGAAGAGTCGAGTGCTTTC TTCTCCGCAGACGCACCTGCCTTGAGTTTTGAAGTTCTCCAAAGTCGCGCGAAGCCTGTG CGCGAAGACGCGCCTGCTCTCCTTGTCGTTCACGGCCTCCTTGGGAGCAGGCGCAACATG AGGAGTTTTTCTGCTCTCTTGAATTCCCCGAAGATCGTTGCCGTCGACTTGCGGAACCAC GGCGACTCTCCTTGGAGAGACCAAATGCGAGTCTCAGATCTCGGCCGCGATCTCCTCTAC ATGCTCCACTCCAAACCGGACCTCTTCTCTTCTTCTGCTCTCGCTTCTTCTTCCTCGCTT CTTTCTGCGCCTCGAGACGTTGTGCTCGTTGGCCACAGCTTGGGGGGTCTGGCGGCGATG TACGCAGCGTTGCGCGCAGAGGAAGCCTCGCGCGGAAGAGACGCGCTCCCGCGAGTGAAA GGTCTCGTCGTTCTGGACGTCGCGCCGGTGGACTACTCAGGTTCTCGGCAGGCGCAGCAG CCGGTCAGTTCGCAGACGGTGGTGAATCTGCTCTGCGACCTGCCGATGAGTGCGTTCGAG GACCGGCGTCAGCTGGAGCGAACTTTGGGCGCAACCGATCCACCCTTGCCGCGGGCAATG ATTCAGTGGCTGATGACTGCCGTGAGAGAGCGCCGGGAGAAGAAGCCTCTGGACGGCGGG AGCATCGCCTGGCGAGCGGCAGGTCGGCCGTCGCGCACCGCCGACAAGACGCTGAAGAAA GACGAGAAAATCAGGCTCGAGTGGCGAATGAACCTCCTCGCCATCAAGCAAATGCTCAAG ACCAAGCAACTCAGATGGCCGAGCGAAGAGTTCGATGCAGAGCGGAGGCGAAAAAGCCGC GTCTCGGGGTGTCGAGACACCGCAGCCGACGCTCCCGTCGACGCGGAAGGGGAACTGGGG AGAAGCACCGCGGCGGAAGGCGAGCAGAGAGCCGCGCATGCGTTTGAGGGACCTGCGCTG TTTCTCCGAGGATCGAACTCGCAGTACGTCGACGTAAAGCGCGACTGGGATACGATTTTG CGGTACTTTCCGAACGCTGAGCACAGAACGGTGCAGAACGCCGGACACTGGCTTCATGCA GAGCAGCCTGTACAGACAGCGGAACTCATCAACCAGTTCCTGGCGAAAGTGTGA
  • Download Fasta

  • Fasta :-

    MKQSPSFSHFARLLFAFLFLLFSPSCASLLPSSLPLGRLPSETRVSLHAGAKHKFHRSAL AFADPCFLPFLAPRSETVFRLPNVSTLLRDTPKMRLSACSSLPRSLSSAFVVPLSSLSSL SSLSSLFPLSSPSPLSSCFSRARLSREVDWSCSVRRAGQRDSSEPRNHATPLQSVPVSSL SHSLCSPSFARAGISSLRATEGCRRAEEAADQEREESSAFFSADAPALSFEVLQSRAKPV REDAPALLVVHGLLGSRRNMRSFSALLNSPKIVAVDLRNHGDSPWRDQMRVSDLGRDLLY MLHSKPDLFSSSALASSSSLLSAPRDVVLVGHSLGGLAAMYAALRAEEASRGRDALPRVK GLVVLDVAPVDYSGSRQAQQPVSSQTVVNLLCDLPMSAFEDRRQLERTLGATDPPLPRAM IQWLMTAVRERREKKPLDGGSIAWRAAGRPSRTADKTLKKDEKIRLEWRMNLLAIKQMLK TKQLRWPSEEFDAERRRKSRVSGCRDTAADAPVDAEGELGRSTAAEGEQRAAHAFEGPAL FLRGSNSQYVDVKRDWDTILRYFPNAEHRTVQNAGHWLHAEQPVQTAELINQFLAKV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_240830499 SRRRKSRVSG0.997unspTGME49_240830499 SRRRKSRVSG0.997unspTGME49_240830499 SRRRKSRVSG0.997unspTGME49_240830502 SKSRVSGCRD0.998unspTGME49_240830549 YSNSQYVDVK0.991unspTGME49_240830145 SRARLSREVD0.991unspTGME49_240830163 SQRDSSEPRN0.994unsp

TGME49_040830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India