TGME49_247240 | ubiquitin carboxyl-terminal hydrolase, family 1 protein

_IDPredictionOTHERSPmTPCS_Position
TGME49_247240OTHER0.9999860.0000130.000001
No Results

  • Fasta :-

    >TGME49_247240 MGAEDGSSGANARNADGSNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFEALK QRHRKIFGFVFLFNWTKDAAGAATGDAADSSQDVAMDDALGAAQCPPDLFFAKQVIENAC ASQAILSVLVNKREEIQDVGSTINALVDFTKDFVDPQMRGEAIGNSELIRAAHNSFRSSS PFDWTDDDDDKEKEDAFHFVSYIFFKGHAYEMDGLKPGPQNLGSCGEDSWTELVRKRLQS RIAKIQTAASGELRFNLMAVTEDNLSKVQQDLLRERVVIQRAKIKLISSGQDIELDDEVD DDQAPSGTPTMEELPDDIAALEKVVREAEDRKKLLKEQEEEELDKRARWKKENARRRHDF VPFLLTVIKHLARKGELVKSVTAAQETIARRQHERKKAKTGATGVST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_247240.fa Sequence name : TGME49_247240 Sequence length : 407 VALUES OF COMPUTED PARAMETERS Coef20 : 3.348 CoefTot : -0.109 ChDiff : -20 ZoneTo : 3 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.612 1.265 -0.020 0.518 MesoH : -0.647 0.330 -0.381 0.225 MuHd_075 : 13.800 6.136 3.322 3.256 MuHd_095 : 17.267 4.231 3.408 1.624 MuHd_100 : 10.440 1.039 1.816 0.261 MuHd_105 : 4.664 2.972 1.917 1.202 Hmax_075 : -2.800 -2.217 -1.687 0.940 Hmax_095 : 2.275 -2.363 -1.060 1.347 Hmax_100 : 1.600 -2.300 -1.372 1.060 Hmax_105 : 0.000 0.400 -1.432 1.760 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9794 0.0206 DFMC : 0.9745 0.0255
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 407 TGME49_247240 MGAEDGSSGANARNADGSNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFEALKQRHRKIFGFVFLFNWTKDAA 80 GAATGDAADSSQDVAMDDALGAAQCPPDLFFAKQVIENACASQAILSVLVNKREEIQDVGSTINALVDFTKDFVDPQMRG 160 EAIGNSELIRAAHNSFRSSSPFDWTDDDDDKEKEDAFHFVSYIFFKGHAYEMDGLKPGPQNLGSCGEDSWTELVRKRLQS 240 RIAKIQTAASGELRFNLMAVTEDNLSKVQQDLLRERVVIQRAKIKLISSGQDIELDDEVDDDQAPSGTPTMEELPDDIAA 320 LEKVVREAEDRKKLLKEQEEEELDKRARWKKENARRRHDFVPFLLTVIKHLARKGELVKSVTAAQETIARRQHERKKAKT 400 GATGVST 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_247240 13 SSGANAR|NA 0.188 . TGME49_247240 20 NADGSNR|WC 0.074 . TGME49_247240 37 FTELVEK|VG 0.053 . TGME49_247240 41 VEKVGVK|GV 0.081 . TGME49_247240 60 ESFEALK|QR 0.062 . TGME49_247240 62 FEALKQR|HR 0.103 . TGME49_247240 64 ALKQRHR|KI 0.088 . TGME49_247240 65 LKQRHRK|IF 0.397 . TGME49_247240 77 FLFNWTK|DA 0.076 . TGME49_247240 113 PDLFFAK|QV 0.082 . TGME49_247240 132 LSVLVNK|RE 0.065 . TGME49_247240 133 SVLVNKR|EE 0.141 . TGME49_247240 151 ALVDFTK|DF 0.071 . TGME49_247240 159 FVDPQMR|GE 0.081 . TGME49_247240 170 GNSELIR|AA 0.178 . TGME49_247240 177 AAHNSFR|SS 0.201 . TGME49_247240 191 TDDDDDK|EK 0.071 . TGME49_247240 193 DDDDKEK|ED 0.058 . TGME49_247240 206 VSYIFFK|GH 0.073 . TGME49_247240 216 YEMDGLK|PG 0.059 . TGME49_247240 235 SWTELVR|KR 0.077 . TGME49_247240 236 WTELVRK|RL 0.069 . TGME49_247240 237 TELVRKR|LQ 0.178 . TGME49_247240 241 RKRLQSR|IA 0.127 . TGME49_247240 244 LQSRIAK|IQ 0.160 . TGME49_247240 254 AASGELR|FN 0.098 . TGME49_247240 267 TEDNLSK|VQ 0.061 . TGME49_247240 274 VQQDLLR|ER 0.078 . TGME49_247240 276 QDLLRER|VV 0.087 . TGME49_247240 281 ERVVIQR|AK 0.105 . TGME49_247240 283 VVIQRAK|IK 0.059 . TGME49_247240 285 IQRAKIK|LI 0.095 . TGME49_247240 323 DIAALEK|VV 0.079 . TGME49_247240 326 ALEKVVR|EA 0.107 . TGME49_247240 331 VREAEDR|KK 0.079 . TGME49_247240 332 REAEDRK|KL 0.084 . TGME49_247240 333 EAEDRKK|LL 0.104 . TGME49_247240 336 DRKKLLK|EQ 0.072 . TGME49_247240 345 EEEELDK|RA 0.063 . TGME49_247240 346 EEELDKR|AR 0.150 . TGME49_247240 348 ELDKRAR|WK 0.085 . TGME49_247240 350 DKRARWK|KE 0.070 . TGME49_247240 351 KRARWKK|EN 0.433 . TGME49_247240 355 WKKENAR|RR 0.089 . TGME49_247240 356 KKENARR|RH 0.132 . TGME49_247240 357 KENARRR|HD 0.146 . TGME49_247240 369 FLLTVIK|HL 0.064 . TGME49_247240 373 VIKHLAR|KG 0.080 . TGME49_247240 374 IKHLARK|GE 0.077 . TGME49_247240 379 RKGELVK|SV 0.135 . TGME49_247240 390 AQETIAR|RQ 0.073 . TGME49_247240 391 QETIARR|QH 0.107 . TGME49_247240 395 ARRQHER|KK 0.124 . TGME49_247240 396 RRQHERK|KA 0.176 . TGME49_247240 397 RQHERKK|AK 0.131 . TGME49_247240 399 HERKKAK|TG 0.088 . ____________________________^_________________

  • Fasta :-

    >TGME49_247240 TCGCTGAAAAGGTGCATGAGTTGTTCTACATATCTTATGTTGTCAAAACAGCCGAAGTGA CCCGGCGCCTGCTCGAGGAGGAGTGCGACACGACGCTTCGTCGGTCAGAACCTGGACTGT CACCGGCAAACATGGTTCCAGAGGAGGAGCAAAGAAAATAGACGAAGCCAAAAAAAATCA ATGTGAATGGTAGGATACACACTGTAAGTCCTCCGGAAGAGTGCAACGTAGGCAGTCTCA GATGTGCCTCAGCACGACTTTCCACCACTGTGACAGAAACAGAGGCTGTGGACTTCAGAA CACATTTGGAAGCGATTCGCGATGTCTAAAGCTTCTAAGCCTTGTTGCGAGATGTTGCTA GATCTTCTGCCACTTCGATGATGTACACAGAAGGGAACTTTTCCCCTCAATCCAATACCC CAGTTGAAAACCGCAGTTTGTGTGTCGGCGACTTGTCTTCGTTATGCACATGCAATTGCA TGCACAGAGGACGCCGTCTATTTGAGGTCCACTACAAGCTTGCTCTGAGGGTCACCCGGA CGACTTGCAGGCAGCCTCTTTTTGCAGAAGCTGTAAGATTGGTGCTTTCTTTTCCTACTC TCCTGCCTGTTCCTCTCTCCTTCGGCTTCCTCGGATTTCCGTGCCGACCCTGCAGTTCTA GGTCGTCTGCGTAGACCGCCATCATACGCTGCACAACCGGACAACTTTGTGGTTTTCGTT CCCTGTGTTTGTTTTCGTAGGCCTTTTCTGCATGCGATCGTGTCATCGTGTTACAGTCGT TTCTGCGTCACTTCCATTCCATTTTTCAGCCACACCTTTTGTCCCGCACTCGCGACCCAA ACTGCTTGTCTCAAGCCTGTGCTCACGCAGAGTGGGTGGCTTGCGTGCCTTGCCGCTCCC TCTCTGTTCTCGAATTTGCAATTTGTGCGCTTATGCTTTAATATGTAACTGGTGGTTGGT CTTCCCGTCAAGTCCCTACCGATCTTTGTCCAGCCGGAAGTGAGTCTACGGTTCCCGTGT TCAGACCTTAGGTTTTCGACTCGTCAACCCGCAGGCGATCCGAGGTGTGTACACACCCCG GACATTTGCGTCTCAGTGTCACTGTTTCTGTATCGTTGACCCCCGGCATATTTGGAGTCG AAAAATCTCTTTCCAACCAGTAAAGCGAAGAGATTTTCGAATTTTCCGTTTCGTTACTCG AGCAGCACCGCGTCGGAGAAAACCTTTCATTTCCCCGCGCGGACACTTGGCGGTCTCTAC GGCAGTTGCCGTTCATCGCATTCAAAACAAGTCGCTATGGGTGCCGAAGACGGGAGCAGC GGCGCAAATGCGCGGAACGCAGACGGCAGCAATCGGTGGTGTTTGATCGAAAGTGACCCG GGCGTCTTCACGGAGCTCGTGGAGAAGGTGGGGGTGAAAGGCGTGGAGTTCGACGAGATT TTCGGCGTCGATGAGGAGTCGTTCGAGGCACTGAAACAGAGGCATCGAAAGATCTTCGGC TTCGTTTTCCTCTTCAACTGGACCAAGGATGCTGCGGGAGCGGCGACTGGAGATGCAGCT GACTCGAGCCAAGACGTAGCCATGGACGATGCCCTCGGTGCTGCTCAGTGTCCACCAGAC CTCTTCTTCGCGAAACAGGTAATCGAGAACGCATGCGCGAGCCAGGCGATCTTGTCCGTT CTTGTCAACAAACGAGAAGAAATCCAAGATGTCGGATCGACAATCAATGCCCTTGTTGAC TTCACCAAGGACTTTGTCGATCCTCAAATGCGTGGAGAGGCCATAGGCAACTCGGAACTC ATTCGAGCTGCGCACAACTCTTTCAGAAGCTCCAGTCCGTTCGACTGGACAGACGACGAC GATGACAAGGAGAAGGAGGACGCCTTCCACTTTGTGTCGTACATCTTTTTCAAAGGCCAT GCGTACGAAATGGACGGCCTGAAGCCCGGTCCCCAAAATTTGGGTTCCTGCGGTGAGGAT AGCTGGACGGAACTTGTCAGGAAGCGGCTGCAAAGCAGAATTGCCAAGATTCAGACGGCC GCAAGTGGAGAGCTGCGTTTCAACCTGATGGCTGTGACGGAAGACAATTTGTCGAAAGTG CAGCAAGACCTGTTGCGCGAGAGGGTGGTTATTCAGCGGGCAAAGATCAAGCTGATTAGT TCTGGCCAGGACATCGAACTGGACGATGAGGTGGACGACGACCAAGCGCCTTCAGGGACG CCCACGATGGAGGAACTCCCCGACGACATCGCCGCTCTGGAAAAAGTTGTTCGGGAAGCG GAGGACAGAAAGAAGCTGCTGAAAGAGCAGGAAGAAGAAGAACTGGACAAACGAGCTCGA TGGAAGAAGGAGAATGCCCGGCGACGTCACGACTTCGTTCCCTTCCTTCTGACCGTCATC AAGCATCTCGCGAGAAAGGGGGAACTGGTCAAATCCGTCACGGCAGCACAGGAGACGATC GCGAGGCGGCAGCACGAGAGGAAAAAGGCGAAAACGGGTGCCACGGGTGTCTCTACATAA CTGCATGCAGTCGACACACCAACCTGGATTCACCTCTACATATGCACATACACAAAAATA TATACACATAAATATATATATATATATATATATGTATACATATATATATATATATATATA TGTATTGTATGCATGTGTAGGCGTACAGTGTGTGAGTCTGTACACCTAAAGACATACGGC ACATGAGTCCAGACGTCTTTGTGTGTATGCTATGTGAAGCGGTTCGCGTTGATAAATTTG TATCCAGACCTGGTTCCATTGCGATTGTTGTTCTTTTCAAAGAGGAAGAAAACTTTTCGG CGAAGGAAAACGACGCCGGTGTCTCTCTCGAATGGCGACACAACGCGCGGCGGCTGCGCT AATCCTCGCGCGTTCGCCGCCGATTTTGACATTTCAGCAATCGTCAAAAGAGACGCGCAT TTTCCAACGTCTCATATAACCGTAAATATTCATATAACCGTGAGTAGCGTATGCGGTTAC CAATCCATATATATATATATATATATATACGTATGTTGTATGATATACATGCGGTATCTA AATAGGGTGATGTGTGGAGACAGATATGTTAGAGTTGAAATTCATTAATAGAGATAAATG CCTATATATATATATAGAGAGAGAGAGATAGATATACAGACATATATATAGGTGGATAAA GATATATATATATATATATATATGTATAGGTAGATATACATACCTATAGATAGGTAGATA GATAGATAAACGCATGAGAGACAAGCGTAGGCATAAGTCGCTACATGTAGATAGATCCAC AGATAAGCAGATGCACGGAAGTATTGGTTTAAGG
  • Download Fasta

  • Fasta :-

    MGAEDGSSGANARNADGSNRWCLIESDPGVFTELVEKVGVKGVEFDEIFGVDEESFEALK QRHRKIFGFVFLFNWTKDAAGAATGDAADSSQDVAMDDALGAAQCPPDLFFAKQVIENAC ASQAILSVLVNKREEIQDVGSTINALVDFTKDFVDPQMRGEAIGNSELIRAAHNSFRSSS PFDWTDDDDDKEKEDAFHFVSYIFFKGHAYEMDGLKPGPQNLGSCGEDSWTELVRKRLQS RIAKIQTAASGELRFNLMAVTEDNLSKVQQDLLRERVVIQRAKIKLISSGQDIELDDEVD DDQAPSGTPTMEELPDDIAALEKVVREAEDRKKLLKEQEEEELDKRARWKKENARRRHDF VPFLLTVIKHLARKGELVKSVTAAQETIARRQHERKKAKTGATGVST

    No Results
  • title: catalytic site
  • coordinates: Q114,C120,H198,D213
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_247240180 SFRSSSPFDW0.997unspTGME49_247240229 SCGEDSWTEL0.99unsp

TGME49_047240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India