TGME49_249670 | cathepsin B

_IDPredictionOTHERSPmTPCS_Position
TGME49_249670SP0.1383080.8613440.000348CS pos: 35-36. TRA-AG. Pr: 0.4969
No Results

  • Fasta :-

    >TGME49_249670 MEKMEGRKSFRVLGTPLPVAALAAILLLGCMYTRAAGTPDDSLFPLSEDTSVDPRESFSA EDVLNAFVSPESVESLFASIVAEQVVATSGNLTESAPRDRDSAPERRSDGGTLRGHPEDA GELLRLLLADSEDMELWKANFFRHLTHSMRHIVRDSVLVSEKAFPSEQADEAGRDPGDLK KALKETGEDVFWESRPASSNAAVALIKRKMEKQAGKTGEGAGHTWEPEVSLRFRYLSLKD AKKLMGTFLVNTKVEGFPTPKGMPLPAKEFENATEPVPAHFDARTAFPACKDVVGHVRDQ GDCGSCWAFASTEAFNDRLCIRSQGKGLMPLSAQHTTSCCNAIHCASFGCNGGQPGMAWR WFERKGVVTGGDFDALGKGTTCWPYEVPFCAHHAKAPFPDCDATLVPRKTPKCRKDCEEQ AYADNVHPFDQDTHKATSAYSLRSRDDVKRDMMTHGPVSGAFMVYEDFLSYKSGVYKHVS GLPVGGHAIKIIGWGTENGEEYWHAVNSWNTYWGDGGQFKIAMGQCGIDGEMVAGEAAWQ ETEGVVNGEEELPGQHASGARVGAHAEEEREM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_249670.fa Sequence name : TGME49_249670 Sequence length : 572 VALUES OF COMPUTED PARAMETERS Coef20 : 3.761 CoefTot : 0.000 ChDiff : -22 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.959 2.271 0.415 0.785 MesoH : -0.294 0.515 -0.248 0.264 MuHd_075 : 27.952 6.587 6.014 4.384 MuHd_095 : 25.927 15.353 5.881 7.437 MuHd_100 : 16.687 9.899 4.293 5.566 MuHd_105 : 13.900 9.238 4.341 4.029 Hmax_075 : 2.450 4.300 -1.916 2.345 Hmax_095 : 3.063 3.763 -0.892 3.115 Hmax_100 : 2.500 4.100 -1.179 3.080 Hmax_105 : 1.900 5.250 -1.733 2.917 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9289 0.0711 DFMC : 0.9436 0.0564
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 572 TGME49_249670 MEKMEGRKSFRVLGTPLPVAALAAILLLGCMYTRAAGTPDDSLFPLSEDTSVDPRESFSAEDVLNAFVSPESVESLFASI 80 VAEQVVATSGNLTESAPRDRDSAPERRSDGGTLRGHPEDAGELLRLLLADSEDMELWKANFFRHLTHSMRHIVRDSVLVS 160 EKAFPSEQADEAGRDPGDLKKALKETGEDVFWESRPASSNAAVALIKRKMEKQAGKTGEGAGHTWEPEVSLRFRYLSLKD 240 AKKLMGTFLVNTKVEGFPTPKGMPLPAKEFENATEPVPAHFDARTAFPACKDVVGHVRDQGDCGSCWAFASTEAFNDRLC 320 IRSQGKGLMPLSAQHTTSCCNAIHCASFGCNGGQPGMAWRWFERKGVVTGGDFDALGKGTTCWPYEVPFCAHHAKAPFPD 400 CDATLVPRKTPKCRKDCEEQAYADNVHPFDQDTHKATSAYSLRSRDDVKRDMMTHGPVSGAFMVYEDFLSYKSGVYKHVS 480 GLPVGGHAIKIIGWGTENGEEYWHAVNSWNTYWGDGGQFKIAMGQCGIDGEMVAGEAAWQETEGVVNGEEELPGQHASGA 560 RVGAHAEEEREM 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_249670 3 ----MEK|ME 0.065 . TGME49_249670 7 MEKMEGR|KS 0.109 . TGME49_249670 8 EKMEGRK|SF 0.103 . TGME49_249670 11 EGRKSFR|VL 0.125 . TGME49_249670 34 LGCMYTR|AA 0.110 . TGME49_249670 55 DTSVDPR|ES 0.113 . TGME49_249670 98 LTESAPR|DR 0.088 . TGME49_249670 100 ESAPRDR|DS 0.129 . TGME49_249670 106 RDSAPER|RS 0.129 . TGME49_249670 107 DSAPERR|SD 0.361 . TGME49_249670 114 SDGGTLR|GH 0.078 . TGME49_249670 125 DAGELLR|LL 0.069 . TGME49_249670 138 EDMELWK|AN 0.061 . TGME49_249670 143 WKANFFR|HL 0.177 . TGME49_249670 150 HLTHSMR|HI 0.083 . TGME49_249670 154 SMRHIVR|DS 0.092 . TGME49_249670 162 SVLVSEK|AF 0.061 . TGME49_249670 174 QADEAGR|DP 0.104 . TGME49_249670 180 RDPGDLK|KA 0.060 . TGME49_249670 181 DPGDLKK|AL 0.105 . TGME49_249670 184 DLKKALK|ET 0.073 . TGME49_249670 195 DVFWESR|PA 0.081 . TGME49_249670 207 AAVALIK|RK 0.062 . TGME49_249670 208 AVALIKR|KM 0.191 . TGME49_249670 209 VALIKRK|ME 0.095 . TGME49_249670 212 IKRKMEK|QA 0.111 . TGME49_249670 216 MEKQAGK|TG 0.081 . TGME49_249670 232 EPEVSLR|FR 0.093 . TGME49_249670 234 EVSLRFR|YL 0.119 . TGME49_249670 239 FRYLSLK|DA 0.089 . TGME49_249670 242 LSLKDAK|KL 0.063 . TGME49_249670 243 SLKDAKK|LM 0.103 . TGME49_249670 253 TFLVNTK|VE 0.055 . TGME49_249670 261 EGFPTPK|GM 0.055 . TGME49_249670 268 GMPLPAK|EF 0.072 . TGME49_249670 284 PAHFDAR|TA 0.148 . TGME49_249670 291 TAFPACK|DV 0.095 . TGME49_249670 298 DVVGHVR|DQ 0.135 . TGME49_249670 318 TEAFNDR|LC 0.098 . TGME49_249670 322 NDRLCIR|SQ 0.200 . TGME49_249670 326 CIRSQGK|GL 0.071 . TGME49_249670 360 QPGMAWR|WF 0.127 . TGME49_249670 364 AWRWFER|KG 0.084 . TGME49_249670 365 WRWFERK|GV 0.180 . TGME49_249670 378 DFDALGK|GT 0.058 . TGME49_249670 395 FCAHHAK|AP 0.076 . TGME49_249670 408 DATLVPR|KT 0.081 . TGME49_249670 409 ATLVPRK|TP 0.062 . TGME49_249670 412 VPRKTPK|CR 0.083 . TGME49_249670 414 RKTPKCR|KD 0.105 . TGME49_249670 415 KTPKCRK|DC 0.112 . TGME49_249670 435 FDQDTHK|AT 0.073 . TGME49_249670 443 TSAYSLR|SR 0.204 . TGME49_249670 445 AYSLRSR|DD 0.107 . TGME49_249670 449 RSRDDVK|RD 0.059 . TGME49_249670 450 SRDDVKR|DM 0.371 . TGME49_249670 472 EDFLSYK|SG 0.071 . TGME49_249670 477 YKSGVYK|HV 0.123 . TGME49_249670 490 VGGHAIK|II 0.081 . TGME49_249670 520 GDGGQFK|IA 0.080 . TGME49_249670 561 QHASGAR|VG 0.089 . TGME49_249670 570 AHAEEER|EM 0.085 . ____________________________^_________________

  • Fasta :-

    >TGME49_249670 CGGTCTGGTTGCTTCCTTTTACGGCTTCTCAGCGTTTTCCTTTCCGGATGAAGCGCCTTT TTGTGCCCAGCTGAACGCCGACAACCGTCGACTTTCGCCGGAAAAACCAACCGCGCGTGT CTCTCCTGCGAACGCTTGTTCTTGACGCGAGTGCTGAGAGGCTGGTCTTGTGGCACCAAG CGCGGACGCCGTGCTTTCGCTCTCCTGTCAGAAACAGAGAAACAGACACTTCCAGAATCT CGTAGGATTCTGGCATCCAAACTCTCTTTTTGAATGGGGTCGTGAGTTTTTTTTTCGGTG TCTGTCAACGGCACGCGCGGCAACGTGACTTGTTCTAGGCCCTCCATACATCCTTCCTCC CTTGCTTTTACGGACGGCGAAAACCCAGAGGTTTTGCGTCTTCAAAAACAAGATTGACGG AATATCAGTCCTGCACCATCAGCTTTTTTTCACCATGGAAAAAATGGAGGGGCGAAAGTC TTTTCGCGTTCTGGGCACCCCGCTGCCCGTCGCCGCGCTCGCGGCAATCCTTCTTCTCGG GTGTATGTACACACGAGCCGCAGGCACCCCGGACGACTCGTTGTTTCCGCTTTCTGAAGA CACATCCGTGGATCCTCGCGAGTCCTTCAGCGCGGAGGACGTCCTGAACGCGTTTGTTTC TCCAGAGTCCGTGGAGTCGTTGTTTGCCAGCATCGTTGCAGAGCAGGTAGTCGCTACCTC CGGCAACCTGACAGAAAGCGCGCCGCGGGACCGCGATTCCGCGCCAGAGCGACGATCCGA CGGAGGCACTTTGCGTGGTCACCCAGAAGATGCAGGGGAACTGCTCCGCCTCCTGCTGGC TGACAGCGAAGACATGGAGCTGTGGAAGGCGAATTTCTTTCGGCACCTCACCCACAGCAT GCGTCACATCGTGCGAGATTCGGTTCTCGTCTCCGAGAAAGCTTTTCCGTCAGAGCAGGC GGACGAAGCGGGCCGGGACCCCGGCGACCTGAAGAAGGCGCTGAAAGAGACTGGCGAAGA CGTCTTCTGGGAAAGTCGCCCCGCCAGCTCGAATGCGGCCGTCGCACTCATCAAAAGAAA GATGGAAAAACAAGCAGGAAAAACAGGAGAAGGTGCTGGACACACATGGGAGCCGGAGGT CTCCCTTCGCTTCAGGTACTTGAGTTTGAAGGACGCGAAGAAACTCATGGGGACCTTCCT CGTCAACACCAAAGTCGAGGGGTTCCCGACTCCCAAAGGCATGCCGCTTCCCGCGAAAGA GTTCGAAAACGCAACAGAGCCGGTACCTGCTCACTTCGATGCCCGGACCGCCTTCCCTGC ATGCAAAGACGTCGTCGGACATGTCAGAGACCAGGGCGACTGCGGATCCTGCTGGGCCTT CGCCAGCACAGAAGCCTTCAACGACCGCCTCTGCATTCGCAGCCAAGGCAAAGGACTCAT GCCCCTGTCTGCTCAACATACGACGTCGTGTTGCAACGCGATTCACTGCGCTTCCTTCGG TTGCAACGGCGGGCAGCCGGGCATGGCGTGGAGATGGTTCGAACGCAAAGGCGTCGTCAC TGGAGGCGATTTCGACGCTCTCGGCAAAGGAACGACTTGCTGGCCATACGAAGTACCCTT CTGTGCTCATCATGCGAAAGCACCCTTCCCCGACTGTGACGCGACCCTCGTACCTCGAAA GACTCCCAAGTGTCGAAAAGACTGCGAAGAACAAGCCTATGCAGACAACGTCCATCCCTT TGATCAGGACACACACAAAGCGACCTCTGCGTATTCACTCCGGTCTCGCGACGACGTCAA GAGAGATATGATGACTCATGGACCTGTGTCGGGGGCCTTCATGGTCTACGAAGATTTTCT CAGCTACAAATCCGGTGTTTACAAGCACGTCTCTGGCCTCCCTGTTGGTGGACACGCAAT CAAAATCATCGGGTGGGGCACTGAAAACGGCGAGGAGTACTGGCATGCCGTGAACAGCTG GAATACGTACTGGGGAGACGGTGGCCAGTTCAAAATTGCGATGGGGCAGTGTGGCATCGA CGGCGAGATGGTGGCTGGCGAGGCTGCGTGGCAGGAGACCGAAGGCGTGGTGAACGGCGA GGAGGAGCTCCCGGGCCAGCATGCATCTGGCGCGAGGGTCGGCGCGCATGCAGAGGAGGA GAGAGAAATGTAGTGGTTTTTCCATTGACGAAAAGACTTCCTGTTTGCGGAAAGAGGCGG CTCGAGCACGTGGGGGTGGCGGTCTGTTTCTAAGAAAAGTACCGGACCTGCGCGGTGCGT TTTACATGCAAATTCCTGTGGGGGTACGTCCAAGCGTGGCGTAGCCTTGGATGACCTAAA TGCTGCCTCAGAGCGTTTCTACCAATTCCGTACCGGCGACCTCATGATCTTTGTCTAAAA TCTTGATGCAGGTTTGTGTTTGCTGAATGGGCTTCAAGTGCGTGTGTTTGATTATGACGA TCGAATCATCCGAGGCAGGTTTCAGCGATTTGCTAGCTGGACGTTGGTTTCTCTGGCGGT GCCGGTACCATTCGCGATTCTGTTTGTTTTACACCGGGTACGCGAGAGCACATGGAGAAG GAGGTACAGTGGGTTTGCTTCTTGGCAGTGTAACTCGTTTGCGCTGAGGACGCACAAGAG AGAACATGAGAACACTGCGAGCGCGTGGTTTGGTGGACAACCCAGTTGGCTTCTCGAATA TGCAGTGTTTGTGTTTTTACCGGGAGTGTAGCGGTCGGGGCTGATGACGCGACGTGGGAA TACAGCGACGATGGCTTCTTTTCCTGTTGTGTGGAGGAGCTACCATCATTAAGGTCCTAC TCAGCTCCTCGACAGAATAATCTCAACACACTGACTCTTGACACAGTGCCGACGTTCCTC TAAAAGCGATCCTGAGGGCGAAAACGATGCGTGGCCACAACAGTAGCGGGAAATAGTCCA GCTGTGGTGGCTGCCGCCAGGGTGTTGTGTCTTTTTCGGGGTCCTGAGGTCCTTGAACGT ATTCATGGTTGGCCACGTGAATGTTCTCATTTTTTGTACACAAATGCGTGTTACACACGC GGTGAAATGGGGAAAATGCTAATATACGTCCGTCCCAGCTTCTGCACAGTGCTTTGGTTG TAAGTGGGATAAGCTTGCAGCGTGTCGTGCCGAATGCTACGCGCAACGTGGTGACAAAAC TCTTGAAAACCTTTTGGCGGTTCACTCATATACGCTGAACCGCCCGCGGGTGTGGATATC CATATGTATTCCACGCGACGATACCGTGTTTACCACATTCGGTTTTGGCAAGAATAATGC ACGCCTGCAGACGGCGTGGACGAGACTTGGGGACGTGCTTGACAGTCACGAGTCCGTCGC GAATGAACAAACGTAACGATGAATTCAATAAAGAACGCTCTTCAATATCTGAACCAGACC TAATATCCATTTACTGGGTCAAGTGATTTCAAGTGTGGA
  • Download Fasta

  • Fasta :-

    MEKMEGRKSFRVLGTPLPVAALAAILLLGCMYTRAAGTPDDSLFPLSEDTSVDPRESFSA EDVLNAFVSPESVESLFASIVAEQVVATSGNLTESAPRDRDSAPERRSDGGTLRGHPEDA GELLRLLLADSEDMELWKANFFRHLTHSMRHIVRDSVLVSEKAFPSEQADEAGRDPGDLK KALKETGEDVFWESRPASSNAAVALIKRKMEKQAGKTGEGAGHTWEPEVSLRFRYLSLKD AKKLMGTFLVNTKVEGFPTPKGMPLPAKEFENATEPVPAHFDARTAFPACKDVVGHVRDQ GDCGSCWAFASTEAFNDRLCIRSQGKGLMPLSAQHTTSCCNAIHCASFGCNGGQPGMAWR WFERKGVVTGGDFDALGKGTTCWPYEVPFCAHHAKAPFPDCDATLVPRKTPKCRKDCEEQ AYADNVHPFDQDTHKATSAYSLRSRDDVKRDMMTHGPVSGAFMVYEDFLSYKSGVYKHVS GLPVGGHAIKIIGWGTENGEEYWHAVNSWNTYWGDGGQFKIAMGQCGIDGEMVAGEAAWQ ETEGVVNGEEELPGQHASGARVGAHAEEEREM

  • title: active site
  • coordinates: Q300,C306,H487,N507
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_24967072 SVSPESVESL0.995unspTGME49_24967072 SVSPESVESL0.995unspTGME49_24967072 SVSPESVESL0.995unspTGME49_249670102 SRDRDSAPER0.996unspTGME49_249670108 SPERRSDGGT0.993unspTGME49_249670237 SFRYLSLKDA0.998unspTGME49_249670410 TVPRKTPKCR0.992unspTGME49_249670438 SHKATSAYSL0.992unspTGME49_2496709 SEGRKSFRVL0.991unspTGME49_24967059 SRESFSAEDV0.995unsp

TGME49_049670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India