TGME49_251490 | ACR, COG2135 domain-containing protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_251490OTHER0.9891520.0005380.010310
No Results

  • Fasta :-

    >TGME49_251490 MCGRMSCTLHPRRLRRVAGLAPLSRSSPSEQRDKKEGEGDAQAAASAEPLQRVKQEEATE NASSLSPSATLSPPTKTEEKKGKVDIKLESKSSAGCRSPSPSSLSSSSSLSASSRSSGVL CSGEETSSLDFLRPRFNVSPTCAVPIIEEANGIRRLRAAEWALRVPGQPKGEGKTPAYNT FNARVEGLTQSRLYRRLLDTHRCVVVADGFYEWKKPKGPGESKQPFFIRHKASVAEAAIP GGDGEAAQLGKSESSSLQDEATARPLSGKRMRDSDSKHEEGAEKKRRNQTHAPETTGFAS EDNAQWHSVLKEGEAPLLFAGLFEDDASPGGRPPATRDCSATILTMDSANTPMADIHSRM PVLLSPADASRWLNANENPFSKLFPDLLGRSKQLYRTTVDLYPVTTRVGNSRYESADCVL PLPKRGTATGSPQKPRGMHTLDFFLAPAEKKKQS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_251490.fa Sequence name : TGME49_251490 Sequence length : 454 VALUES OF COMPUTED PARAMETERS Coef20 : 4.815 CoefTot : 0.642 ChDiff : 11 ZoneTo : 29 KR : 6 DE : 0 CleavSite : 27 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.824 0.724 0.032 0.392 MesoH : -0.815 -0.089 -0.338 0.097 MuHd_075 : 29.282 17.248 6.972 6.885 MuHd_095 : 37.433 19.841 8.678 8.680 MuHd_100 : 27.532 16.217 6.327 6.759 MuHd_105 : 33.471 20.869 7.697 7.752 Hmax_075 : 8.600 9.683 -0.528 2.217 Hmax_095 : 8.400 9.100 2.691 2.888 Hmax_100 : 8.200 10.100 1.376 3.450 Hmax_105 : 10.800 10.733 1.545 3.943 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0064 0.9936 DFMC : 0.0129 0.9871 This protein is probably imported in mitochondria. f(Ser) = 0.1724 f(Arg) = 0.2069 CMi = 0.47939 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 454 TGME49_251490 MCGRMSCTLHPRRLRRVAGLAPLSRSSPSEQRDKKEGEGDAQAAASAEPLQRVKQEEATENASSLSPSATLSPPTKTEEK 80 KGKVDIKLESKSSAGCRSPSPSSLSSSSSLSASSRSSGVLCSGEETSSLDFLRPRFNVSPTCAVPIIEEANGIRRLRAAE 160 WALRVPGQPKGEGKTPAYNTFNARVEGLTQSRLYRRLLDTHRCVVVADGFYEWKKPKGPGESKQPFFIRHKASVAEAAIP 240 GGDGEAAQLGKSESSSLQDEATARPLSGKRMRDSDSKHEEGAEKKRRNQTHAPETTGFASEDNAQWHSVLKEGEAPLLFA 320 GLFEDDASPGGRPPATRDCSATILTMDSANTPMADIHSRMPVLLSPADASRWLNANENPFSKLFPDLLGRSKQLYRTTVD 400 LYPVTTRVGNSRYESADCVLPLPKRGTATGSPQKPRGMHTLDFFLAPAEKKKQS 480 ...............P................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ TGME49_251490 4 ---MCGR|MS 0.089 . TGME49_251490 12 SCTLHPR|RL 0.084 . TGME49_251490 13 CTLHPRR|LR 0.097 . TGME49_251490 15 LHPRRLR|RV 0.225 . TGME49_251490 16 HPRRLRR|VA 0.647 *ProP* TGME49_251490 25 GLAPLSR|SS 0.127 . TGME49_251490 32 SSPSEQR|DK 0.134 . TGME49_251490 34 PSEQRDK|KE 0.070 . TGME49_251490 35 SEQRDKK|EG 0.261 . TGME49_251490 52 SAEPLQR|VK 0.076 . TGME49_251490 54 EPLQRVK|QE 0.066 . TGME49_251490 76 TLSPPTK|TE 0.084 . TGME49_251490 80 PTKTEEK|KG 0.055 . TGME49_251490 81 TKTEEKK|GK 0.116 . TGME49_251490 83 TEEKKGK|VD 0.077 . TGME49_251490 87 KGKVDIK|LE 0.067 . TGME49_251490 91 DIKLESK|SS 0.066 . TGME49_251490 97 KSSAGCR|SP 0.190 . TGME49_251490 115 SLSASSR|SS 0.210 . TGME49_251490 133 SSLDFLR|PR 0.096 . TGME49_251490 135 LDFLRPR|FN 0.080 . TGME49_251490 154 EEANGIR|RL 0.097 . TGME49_251490 155 EANGIRR|LR 0.098 . TGME49_251490 157 NGIRRLR|AA 0.418 . TGME49_251490 164 AAEWALR|VP 0.073 . TGME49_251490 170 RVPGQPK|GE 0.070 . TGME49_251490 174 QPKGEGK|TP 0.062 . TGME49_251490 184 YNTFNAR|VE 0.081 . TGME49_251490 192 EGLTQSR|LY 0.079 . TGME49_251490 195 TQSRLYR|RL 0.299 . TGME49_251490 196 QSRLYRR|LL 0.194 . TGME49_251490 202 RLLDTHR|CV 0.091 . TGME49_251490 214 DGFYEWK|KP 0.056 . TGME49_251490 215 GFYEWKK|PK 0.148 . TGME49_251490 217 YEWKKPK|GP 0.082 . TGME49_251490 223 KGPGESK|QP 0.060 . TGME49_251490 229 KQPFFIR|HK 0.099 . TGME49_251490 231 PFFIRHK|AS 0.057 . TGME49_251490 251 EAAQLGK|SE 0.090 . TGME49_251490 264 QDEATAR|PL 0.113 . TGME49_251490 269 ARPLSGK|RM 0.066 . TGME49_251490 270 RPLSGKR|MR 0.117 . TGME49_251490 272 LSGKRMR|DS 0.182 . TGME49_251490 277 MRDSDSK|HE 0.071 . TGME49_251490 284 HEEGAEK|KR 0.061 . TGME49_251490 285 EEGAEKK|RR 0.075 . TGME49_251490 286 EGAEKKR|RN 0.160 . TGME49_251490 287 GAEKKRR|NQ 0.196 . TGME49_251490 311 QWHSVLK|EG 0.064 . TGME49_251490 332 DASPGGR|PP 0.085 . TGME49_251490 337 GRPPATR|DC 0.194 . TGME49_251490 359 MADIHSR|MP 0.072 . TGME49_251490 371 SPADASR|WL 0.128 . TGME49_251490 382 NENPFSK|LF 0.064 . TGME49_251490 390 FPDLLGR|SK 0.105 . TGME49_251490 392 DLLGRSK|QL 0.059 . TGME49_251490 396 RSKQLYR|TT 0.089 . TGME49_251490 407 LYPVTTR|VG 0.067 . TGME49_251490 412 TRVGNSR|YE 0.106 . TGME49_251490 424 CVLPLPK|RG 0.054 . TGME49_251490 425 VLPLPKR|GT 0.171 . TGME49_251490 434 ATGSPQK|PR 0.063 . TGME49_251490 436 GSPQKPR|GM 0.128 . TGME49_251490 450 FLAPAEK|KK 0.058 . TGME49_251490 451 LAPAEKK|KQ 0.094 . TGME49_251490 452 APAEKKK|QS 0.140 . ____________________________^_________________

  • Fasta :-

    >TGME49_251490 CTCTCGGAGAAGAGTCGCAGAGGCGAGAGGAAAAACAGCAAAGCGCCAAATGAACAGACA GAGCTTTGACTGTACACAAAACGCGAGGGATGTATGGATAACCGACCCAGTCGCTGGTCT GGACAGCTCTGCCGTGTCTAGCCGTTGCGCGACCGAGTGTGTAGACTCGTTCTTGTCCAG CGAACGAAGTCAGCGGCGAGCTTTGCATCTTCCTCCTCTTGTTCTCTCTGGTTCATTTTT TATTGTGTAGAAACGCGCTCTTTCCTCCTTCCTCGTTGTTCCGCTCCGGTGGCTCTTTCG AGAGCGACTCTTTCAAACCGCTTCACGACACCCCGTTGAGACTCTGCGCCTCAACGCTGT TCTTTTGAGTCGCTTTTCCGCCTCTTTATTTCTCCCAAACTCTTCCTTGCTTTGTGAAAG CGCGGCGCCCAAGTTGTCTCTCTTTTCGTCCTGTCGGTCAGAAGGCGTCCTCCCGGTCTT GCTTCTTCCGCCCTCAGGTCTGTCGAGTTGAGCTTGAGGGCGTCTGAGCTGGCAGCCACG GCTAAAGGGAGTCTCTTCTCTCGTTCCTTTCCTGTCTCCTCCCTCTCCTCCCTCTGCTCC TCTGCTCTCCGTCGTTGCTCGGCTGTCTGCCCGCCATACATGCGAGTTCGCAGGTTTGCT GGCATTTGCAACTCTGGGAGCTCTGCCGGAGCTTGCATGCGATGCGCGTCTCCGCAAGGC TTCGCTGCTCGCCGAGATGTGCGGACGCATGAGCTGCACTTTGCATCCACGGCGTCTCCG TCGGGTCGCTGGTCTCGCGCCTTTGTCTCGGTCGTCGCCTTCTGAGCAGCGAGACAAGAA AGAGGGAGAGGGAGACGCCCAGGCCGCTGCGAGCGCGGAGCCTCTCCAGCGCGTTAAACA GGAGGAAGCGACTGAAAATGCCTCTTCTCTCTCTCCCTCCGCCACACTCTCTCCTCCGAC AAAAACTGAGGAAAAGAAAGGAAAAGTCGACATCAAACTCGAGTCCAAAAGTTCCGCAGG CTGTCGCTCTCCTTCCCCGTCATCTCTCTCTTCTTCGTCCTCTCTCTCTGCTTCTTCTCG CTCCTCTGGGGTACTGTGTTCGGGAGAAGAAACGTCTTCTCTCGACTTCCTCCGGCCGCG CTTCAACGTTTCGCCGACCTGTGCAGTGCCGATCATCGAAGAGGCGAATGGCATCCGTCG CCTGCGAGCAGCTGAATGGGCGCTTCGCGTTCCTGGACAGCCGAAAGGCGAGGGGAAGAC TCCCGCGTACAACACGTTCAACGCCCGCGTGGAGGGCCTCACGCAGTCCAGACTGTATCG GAGACTTCTGGATACGCACCGGTGCGTGGTGGTTGCGGACGGCTTCTACGAATGGAAGAA ACCGAAAGGGCCAGGCGAGTCGAAGCAGCCTTTCTTCATTCGGCACAAAGCCTCTGTAGC AGAGGCGGCGATTCCGGGGGGTGACGGCGAGGCTGCCCAGCTCGGAAAAAGCGAGAGCAG CAGTCTGCAGGACGAGGCGACGGCGAGGCCTCTCAGTGGCAAGCGCATGAGAGACTCAGA TTCGAAACATGAGGAGGGCGCAGAGAAAAAAAGACGAAACCAGACGCATGCTCCAGAGAC GACTGGGTTCGCGTCCGAGGACAATGCGCAGTGGCATAGTGTGTTGAAGGAAGGCGAGGC GCCGCTGCTCTTTGCAGGTCTCTTCGAGGACGACGCGTCTCCAGGGGGGCGGCCGCCTGC AACGCGAGACTGCTCCGCGACGATTCTAACCATGGACAGTGCAAACACACCTATGGCTGA CATTCACAGCAGGATGCCCGTCCTCCTCTCTCCTGCGGACGCCTCGCGGTGGCTGAACGC CAATGAAAATCCGTTTTCAAAACTCTTTCCGGACCTTCTTGGCCGTTCTAAGCAGCTCTA TCGCACGACTGTGGATCTGTACCCGGTGACGACGCGCGTTGGGAACAGTCGCTACGAAAG CGCAGACTGCGTTCTTCCTCTCCCAAAAAGAGGCACTGCTACAGGGTCTCCCCAAAAGCC GCGAGGAATGCACACTCTTGATTTCTTCCTCGCACCTGCAGAGAAGAAGAAACAGAGTTA ACCGCACAGGGAGGAAGAGAAGAAAGACACAGAAATAGGCGTCCGAGCCGACGCAGAGAG AGAGAGACAGAAAGACGCACAAAAGAGAAGGAGACAGGAAGAGAGAAGGAGACAGGAAGA GAGAAGGAGACAGGAAGACACATCACAGTGCAGTTGACACAGGCCTTCATCCTCGCTCTC TAGGTAAAACGTTTAGCCATTTTTTTCCGGTGCTTCGCGTCTCAGCGTCATGGAATTCTC CCTGAAAGTGCCGAGGCTCGGGGAATACAGAGGCGATGGGCGTCGCTTTCGACCCTCCGG TTTCCTCGCGCTGTCGTGCATGCGCGTCATCTCGTCAAGAAACGACAGAGGAAAGGCGGT CTCCGCATGAGAAGAGAGACAGCAAGGCCTTTTAGATCTTTCTCAAGAATTCCAGATATC TGTAGACGCGTGCGTCCTGTATTGTCAAGTGTGTGGATGGACAGGAACGATCAAACAAAC GCGACGACGCGCCCAGGCGCTAAGCGAATGAAAAGGAATATCCAGCACTGTTTCTTTTTT CGAGGTCTCAACAGATGCGGTCATCTCTCTCCCTAGAGACAACATTACGATCAAAGAGTG CCATCCTGCGATGCGGTCAAAAACTCTCCTTTGATACCTTCACCCTGTGACCGTCCGTCG CGTAGATTTTCCGCGTTTTTGTCTGGTGTGGCTGCAGCGCTTGGC
  • Download Fasta

  • Fasta :-

    MCGRMSCTLHPRRLRRVAGLAPLSRSSPSEQRDKKEGEGDAQAAASAEPLQRVKQEEATE NASSLSPSATLSPPTKTEEKKGKVDIKLESKSSAGCRSPSPSSLSSSSSLSASSRSSGVL CSGEETSSLDFLRPRFNVSPTCAVPIIEEANGIRRLRAAEWALRVPGQPKGEGKTPAYNT FNARVEGLTQSRLYRRLLDTHRCVVVADGFYEWKKPKGPGESKQPFFIRHKASVAEAAIP GGDGEAAQLGKSESSSLQDEATARPLSGKRMRDSDSKHEEGAEKKRRNQTHAPETTGFAS EDNAQWHSVLKEGEAPLLFAGLFEDDASPGGRPPATRDCSATILTMDSANTPMADIHSRM PVLLSPADASRWLNANENPFSKLFPDLLGRSKQLYRTTVDLYPVTTRVGNSRYESADCVL PLPKRGTATGSPQKPRGMHTLDFFLAPAEKKKQS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_251490256 SSESSSLQDE0.994unspTGME49_251490256 SSESSSLQDE0.994unspTGME49_251490256 SSESSSLQDE0.994unspTGME49_251490267 SARPLSGKRM0.998unspTGME49_251490274 SRMRDSDSKH0.995unspTGME49_251490276 SRDSDSKHEE0.995unspTGME49_251490411 SRVGNSRYES0.995unspTGME49_25149027 SLSRSSPSEQ0.998unspTGME49_251490100 SCRSPSPSSL0.994unsp

TGME49_051490      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India