TGME49_252440 | peptidase c13 family protein

UniProt_ID: Q8MPF3

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004197 GO:0008233
Computed_GO_Functions: cysteine-type endopeptidase activity peptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	TGME49_252440	OTHER	0.999908	0.000075	0.000017

No Results

Fasta :-
>TGME49_252440 MATSEPLAPAAASSSSSPSSFSSSSFSASLASLCAASASPVASGSSHISPRLRFFLFSLL SLCLSSPVCFSRASSAPSASSRSSSSPSLSSFFSGDFRNNWAVIVNTSRYWYNYRHTANA LSIYHTVKRLGIPDSQIILMLSDDHACSPRNFFPGRIFNDHTRTLNLYGAGDRSGGGSSV EVDYRGDEVQVATLLQLLAGRHNPATPRGKRLLTDENSQVLLYLSGHGGDGFLKFQDWEE ISSVDLADAVAQMKAQRRFREMLLIAETCQGSTLLDAMATAGVLGLASSGPKESSYSHHA DGFLGVAVIDRWTYYTLQFFEKSVRDASSSATFEQLMNSYSRKQLLSTASVRTELFGRPL GETKLTEFFATASSLHATHGLYPIKTQRRVSWRMCRDRPAQDTQHKRGNSRAGGENSSER EENSIEREETENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREE NSSEREENSIEREENSSERGGRNAVRVGTYYERHFAITREDRGEFDQRGRNAGKAGRTET DGQAEKAREEAGRPEAEGASVKQAVETLVERIWGGREEKFQSTLVAPGLMCLALGFAGVA SVLL
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_252440.fa Sequence name : TGME49_252440 Sequence length : 604 VALUES OF COMPUTED PARAMETERS Coef20 : 4.235 CoefTot : 3.907 ChDiff : -16 ZoneTo : 133 KR : 9 DE : 2 CleavSite : 117 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.212 2.235 0.484 0.762 MesoH : 0.853 0.643 0.051 0.259 MuHd_075 : 38.702 20.011 10.017 7.732 MuHd_095 : 29.691 19.765 7.302 6.212 MuHd_100 : 33.909 20.806 7.146 7.415 MuHd_105 : 35.983 22.025 9.719 9.111 Hmax_075 : 13.200 13.100 2.888 4.770 Hmax_095 : 6.400 25.200 3.408 5.644 Hmax_100 : 13.100 25.000 5.696 5.400 Hmax_105 : 11.600 11.200 2.273 4.910 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3495 0.6505 DFMC : 0.0224 0.9776 This protein is probably imported in chloroplast. f(Ser) = 0.3083 f(Arg) = 0.0602 CMi = 1.99902 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 604 TGME49_252440 MATSEPLAPAAASSSSSPSSFSSSSFSASLASLCAASASPVASGSSHISPRLRFFLFSLLSLCLSSPVCFSRASSAPSAS 80 SRSSSSPSLSSFFSGDFRNNWAVIVNTSRYWYNYRHTANALSIYHTVKRLGIPDSQIILMLSDDHACSPRNFFPGRIFND 160 HTRTLNLYGAGDRSGGGSSVEVDYRGDEVQVATLLQLLAGRHNPATPRGKRLLTDENSQVLLYLSGHGGDGFLKFQDWEE 240 ISSVDLADAVAQMKAQRRFREMLLIAETCQGSTLLDAMATAGVLGLASSGPKESSYSHHADGFLGVAVIDRWTYYTLQFF 320 EKSVRDASSSATFEQLMNSYSRKQLLSTASVRTELFGRPLGETKLTEFFATASSLHATHGLYPIKTQRRVSWRMCRDRPA 400 QDTQHKRGNSRAGGENSSEREENSIEREETENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREE 480 NSSEREENSIEREENSSERGGRNAVRVGTYYERHFAITREDRGEFDQRGRNAGKAGRTETDGQAEKAREEAGRPEAEGAS 560 VKQAVETLVERIWGGREEKFQSTLVAPGLMCLALGFAGVASVLL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................................ 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_252440 51 SSHISPR|LR 0.099 . TGME49_252440 53 HISPRLR|FF 0.114 . TGME49_252440 72 SPVCFSR|AS 0.108 . TGME49_252440 82 APSASSR|SS 0.171 . TGME49_252440 98 FFSGDFR|NN 0.099 . TGME49_252440 109 VIVNTSR|YW 0.102 . TGME49_252440 115 RYWYNYR|HT 0.097 . TGME49_252440 128 SIYHTVK|RL 0.074 . TGME49_252440 129 IYHTVKR|LG 0.129 . TGME49_252440 150 DHACSPR|NF 0.118 . TGME49_252440 156 RNFFPGR|IF 0.133 . TGME49_252440 163 IFNDHTR|TL 0.096 . TGME49_252440 173 LYGAGDR|SG 0.105 . TGME49_252440 185 SVEVDYR|GD 0.113 . TGME49_252440 201 LQLLAGR|HN 0.077 . TGME49_252440 208 HNPATPR|GK 0.084 . TGME49_252440 210 PATPRGK|RL 0.064 . TGME49_252440 211 ATPRGKR|LL 0.469 . TGME49_252440 234 GGDGFLK|FQ 0.070 . TGME49_252440 254 DAVAQMK|AQ 0.065 . TGME49_252440 257 AQMKAQR|RF 0.086 . TGME49_252440 258 QMKAQRR|FR 0.168 . TGME49_252440 260 KAQRRFR|EM 0.217 . TGME49_252440 292 LASSGPK|ES 0.070 . TGME49_252440 311 GVAVIDR|WT 0.096 . TGME49_252440 322 TLQFFEK|SV 0.152 . TGME49_252440 325 FFEKSVR|DA 0.126 . TGME49_252440 342 LMNSYSR|KQ 0.075 . TGME49_252440 343 MNSYSRK|QL 0.101 . TGME49_252440 352 LSTASVR|TE 0.076 . TGME49_252440 358 RTELFGR|PL 0.101 . TGME49_252440 364 RPLGETK|LT 0.062 . TGME49_252440 385 HGLYPIK|TQ 0.059 . TGME49_252440 388 YPIKTQR|RV 0.116 . TGME49_252440 389 PIKTQRR|VS 0.107 . TGME49_252440 393 QRRVSWR|MC 0.152 . TGME49_252440 396 VSWRMCR|DR 0.322 . TGME49_252440 398 WRMCRDR|PA 0.148 . TGME49_252440 406 AQDTQHK|RG 0.056 . TGME49_252440 407 QDTQHKR|GN 0.251 . TGME49_252440 411 HKRGNSR|AG 0.098 . TGME49_252440 420 GENSSER|EE 0.107 . TGME49_252440 427 EENSIER|EE 0.071 . TGME49_252440 436 TENSSER|EE 0.107 . TGME49_252440 443 EENSSER|EE 0.095 . TGME49_252440 450 EENSSER|EE 0.095 . TGME49_252440 457 EENSSER|EE 0.095 . TGME49_252440 464 EENSSER|EE 0.095 . TGME49_252440 471 EENSSER|EE 0.095 . TGME49_252440 478 EENSSER|EE 0.095 . TGME49_252440 485 EENSSER|EE 0.098 . TGME49_252440 492 EENSIER|EE 0.090 . TGME49_252440 499 EENSSER|GG 0.096 . TGME49_252440 502 SSERGGR|NA 0.357 . TGME49_252440 506 GGRNAVR|VG 0.103 . TGME49_252440 513 VGTYYER|HF 0.072 . TGME49_252440 519 RHFAITR|ED 0.084 . TGME49_252440 522 AITREDR|GE 0.243 . TGME49_252440 528 RGEFDQR|GR 0.098 . TGME49_252440 530 EFDQRGR|NA 0.146 . TGME49_252440 534 RGRNAGK|AG 0.075 . TGME49_252440 537 NAGKAGR|TE 0.097 . TGME49_252440 546 TDGQAEK|AR 0.067 . TGME49_252440 548 GQAEKAR|EE 0.105 . TGME49_252440 553 AREEAGR|PE 0.102 . TGME49_252440 562 AEGASVK|QA 0.066 . TGME49_252440 571 VETLVER|IW 0.089 . TGME49_252440 576 ERIWGGR|EE 0.073 . TGME49_252440 579 WGGREEK|FQ 0.131 . ____________________________^_________________

Fasta :-
>TGME49_252440 ATGGCGACGTCGGAGCCTCTCGCGCCCGCCGCGGCTTCTTCTTCTTCTTCTCCTTCTTCT TTTTCTTCTTCTTCTTTTTCTGCTTCACTCGCGTCTCTCTGCGCAGCTTCTGCCTCGCCT GTAGCCTCTGGCTCTTCTCACATCTCGCCTCGTCTCCGTTTCTTTCTCTTTTCTCTCCTC TCTCTCTGTCTGTCGTCACCTGTCTGCTTCTCTCGCGCCTCGTCTGCTCCCTCCGCCTCC TCGCGTTCTTCTTCTTCTCCGTCTTTGTCGTCGTTTTTCTCCGGCGACTTTCGGAACAAC TGGGCAGTGATCGTGAACACCTCGCGGTACTGGTACAACTACCGGCACACAGCGAACGCG TTGTCGATTTACCACACCGTGAAGCGCCTGGGGATCCCCGACAGCCAGATCATCTTGATG CTTTCTGACGATCACGCCTGCTCGCCGCGGAACTTCTTTCCAGGGCGGATCTTCAACGAT CACACGCGGACCTTGAATCTCTACGGAGCAGGCGACAGGTCCGGAGGCGGCAGCAGCGTC GAGGTCGACTACCGCGGAGACGAAGTCCAGGTCGCGACTCTTCTGCAGCTGCTCGCAGGG CGCCACAATCCCGCGACGCCGCGCGGGAAGCGCCTGTTGACCGACGAGAACAGTCAGGTG TTGCTGTACCTCTCAGGTCACGGCGGAGACGGCTTCTTGAAGTTCCAGGACTGGGAGGAG ATCTCCAGTGTCGACTTGGCAGATGCTGTGGCGCAGATGAAGGCCCAGCGGCGCTTCCGA GAGATGCTGCTGATCGCGGAAACCTGCCAAGGCAGTACGCTGCTGGACGCGATGGCGACG GCAGGCGTCCTGGGTCTCGCGTCTTCCGGTCCAAAAGAGAGCAGCTACTCGCACCATGCA GACGGCTTCCTCGGCGTCGCCGTCATCGACCGGTGGACCTACTACACTCTCCAGTTCTTC GAAAAGTCGGTGAGAGACGCCTCGTCTTCCGCCACCTTCGAGCAACTCATGAACAGCTAC TCGCGGAAGCAGCTGCTCTCGACGGCTTCCGTGCGAACCGAGCTGTTCGGCAGGCCGCTC GGGGAAACCAAGCTCACAGAGTTCTTCGCCACTGCCTCCAGTCTGCATGCGACTCACGGC CTCTACCCAATAAAAACGCAGAGACGAGTCTCCTGGAGAATGTGCAGAGACAGACCGGCG CAAGACACTCAGCACAAGCGAGGGAACTCGCGCGCGGGAGGAGAGAACTCGAGCGAGAGA GAAGAGAACTCGATCGAGAGAGAAGAGACCGAGAACTCGAGCGAGAGAGAAGAGAACTCG AGCGAGAGAGAAGAGAACTCGAGCGAGAGAGAAGAGAACTCGAGCGAGAGAGAAGAGAAC TCGAGCGAGAGAGAAGAGAACTCGAGCGAGAGAGAAGAGAACTCGAGCGAGAGAGAAGAG AACTCGAGCGAGAGAGAAGAGAACTCGATCGAGAGAGAAGAGAACTCGAGCGAGAGAGGA GGGCGGAATGCAGTGCGTGTGGGGACCTACTACGAAAGACACTTTGCGATCACGCGTGAG GACAGAGGAGAGTTCGACCAGAGAGGGAGAAACGCTGGCAAGGCAGGAAGGACAGAGACG GACGGACAGGCCGAGAAGGCAAGAGAAGAAGCAGGAAGGCCAGAGGCAGAAGGTGCGTCA GTGAAGCAAGCTGTCGAGACCCTTGTGGAGAGGATTTGGGGAGGACGCGAAGAGAAGTTC CAGTCGACGCTTGTGGCTCCCGGATTGATGTGCCTAGCGCTGGGCTTCGCGGGGGTCGCC TCTGTTCTTCTGTAG
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Fasta :-

MATSEPLAPAAASSSSSPSSFSSSSFSASLASLCAASASPVASGSSHISPRLRFFLFSLL SLCLSSPVCFSRASSAPSASSRSSSSPSLSSFFSGDFRNNWAVIVNTSRYWYNYRHTANA LSIYHTVKRLGIPDSQIILMLSDDHACSPRNFFPGRIFNDHTRTLNLYGAGDRSGGGSSV EVDYRGDEVQVATLLQLLAGRHNPATPRGKRLLTDENSQVLLYLSGHGGDGFLKFQDWEE ISSVDLADAVAQMKAQRRFREMLLIAETCQGSTLLDAMATAGVLGLASSGPKESSYSHHA DGFLGVAVIDRWTYYTLQFFEKSVRDASSSATFEQLMNSYSRKQLLSTASVRTELFGRPL GETKLTEFFATASSLHATHGLYPIKTQRRVSWRMCRDRPAQDTQHKRGNSRAGGENSSER EENSIEREETENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREENSSEREE NSSEREENSIEREENSSERGGRNAVRVGTYYERHFAITREDRGEFDQRGRNAGKAGRTET DGQAEKAREEAGRPEAEGASVKQAVETLVERIWGGREEKFQSTLVAPGLMCLALGFAGVA SVLL

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	TGME49_252440	86 S	RSSSSPSLS	0.991	unsp	TGME49_252440	86 S	RSSSSPSLS	0.991	unsp	TGME49_252440	86 S	RSSSSPSLS	0.991	unsp	TGME49_252440	323 S	FFEKSVRDA	0.99	unsp	TGME49_252440	328 S	VRDASSSAT	0.994	unsp	TGME49_252440	391 S	QRRVSWRMC	0.998	unsp	TGME49_252440	424 S	REENSIERE	0.992	unsp	TGME49_252440	440 S	REENSSERE	0.992	unsp	TGME49_252440	441 S	EENSSEREE	0.996	unsp	TGME49_252440	447 S	REENSSERE	0.992	unsp	TGME49_252440	448 S	EENSSEREE	0.996	unsp	TGME49_252440	454 S	REENSSERE	0.992	unsp	TGME49_252440	455 S	EENSSEREE	0.996	unsp	TGME49_252440	461 S	REENSSERE	0.992	unsp	TGME49_252440	462 S	EENSSEREE	0.996	unsp	TGME49_252440	468 S	REENSSERE	0.992	unsp	TGME49_252440	469 S	EENSSEREE	0.996	unsp	TGME49_252440	475 S	REENSSERE	0.992	unsp	TGME49_252440	476 S	EENSSEREE	0.996	unsp	TGME49_252440	482 S	REENSSERE	0.992	unsp	TGME49_252440	483 S	EENSSEREE	0.996	unsp	TGME49_252440	489 S	REENSIERE	0.992	unsp	TGME49_252440	497 S	EENSSERGG	0.996	unsp	TGME49_252440	17 S	SSSSSPSSF	0.993	unsp	TGME49_252440	84 S	SSRSSSSPS	0.995	unsp

TGME49_252440 | peptidase c13 family protein

ID's

UniProt_ID: Q8MPF3

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004197 GO:0008233

Computed_GO_Functions: cysteine-type endopeptidase activity peptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

TGME49_052440

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India