TGME49_254010 | serine carboxypeptidase s28 protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_254010SP0.4696780.5084440.021878CS pos: 48-49. VEA-TG. Pr: 0.8922
No Results

  • Fasta :-

    >TGME49_254010 MAVSRCRSASNPGRRSGVCRSARLPLRLLFTCTCVFASLFFAANPVEATGWFFRFLPIQR EEHLRLEGLKASGTPPQAGRHTREEESARARGEEKERDREASASEGGEKRRDGGDGGLRV IQEKETGRGSDERSEEGRSSSNLLPGFLRRFLPSPSFQSGQVNLSTDQERRLETDTDTNE AGDRERREQWGGEGSRSREADRGELEVQEGWFLQPLDHGNPLVFNRLGHDAWRQKFYRAK RKRRSSKEEESTEVAGHAKTERQNDSLTDDAIRPIFVYIGGEGPLSSLEVRQGLLAEMGD IFGASLYALEHRYYGDSHPRPDSSVVNLQWLTSHQALGDLAAFVAHVKQQEAEEHPQDLA PEDVPVVVFGCSYPGSLAAYARAKYPASILGAVSSSSPVEASALFQAFDRVVQRVLPAAC TAKVKAATAVVERRLFSGEEEAVKVAAKFGCGADVPMKTHDQRVALLYVIADAIAESVQY NRQPTRPWIEEVCACFSETASEREETHDNKGDKREKRDNEEDLVNALAKAVQLMLAKLKM TCKDSNLLQLTDTRLGPQASASARLWTWQSCAEYGYWQVAYKDSVRSHLIDLDWHMRMCN ALFPLPSGSKFSTDVVAETNVWSGDKLVAGVGAATNIHFTNGENDPWAPLSVTEVSPVVV DRQGLSSFTIQDGSHCNDFYAYGGTEPVAVTEAKARIQNAIRAWLEDFRERREQQKRKVD PPLTKTFSATSVGGDSEL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_254010.fa Sequence name : TGME49_254010 Sequence length : 738 VALUES OF COMPUTED PARAMETERS Coef20 : 4.920 CoefTot : 1.188 ChDiff : -13 ZoneTo : 60 KR : 9 DE : 1 CleavSite : 64 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.929 1.912 0.379 0.622 MesoH : -0.174 0.614 -0.183 0.244 MuHd_075 : 38.110 17.381 7.430 9.374 MuHd_095 : 39.876 18.268 8.502 9.627 MuHd_100 : 37.719 20.062 9.333 8.901 MuHd_105 : 37.685 21.448 10.083 8.990 Hmax_075 : -1.138 5.425 0.602 0.639 Hmax_095 : 13.900 14.400 3.363 5.060 Hmax_100 : 16.700 18.200 4.384 5.360 Hmax_105 : 14.600 14.787 5.567 4.620 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0273 0.9727 DFMC : 0.0145 0.9855 This protein is probably imported in mitochondria. f(Ser) = 0.1000 f(Arg) = 0.1500 CMi = 0.35714 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 738 TGME49_254010 MAVSRCRSASNPGRRSGVCRSARLPLRLLFTCTCVFASLFFAANPVEATGWFFRFLPIQREEHLRLEGLKASGTPPQAGR 80 HTREEESARARGEEKERDREASASEGGEKRRDGGDGGLRVIQEKETGRGSDERSEEGRSSSNLLPGFLRRFLPSPSFQSG 160 QVNLSTDQERRLETDTDTNEAGDRERREQWGGEGSRSREADRGELEVQEGWFLQPLDHGNPLVFNRLGHDAWRQKFYRAK 240 RKRRSSKEEESTEVAGHAKTERQNDSLTDDAIRPIFVYIGGEGPLSSLEVRQGLLAEMGDIFGASLYALEHRYYGDSHPR 320 PDSSVVNLQWLTSHQALGDLAAFVAHVKQQEAEEHPQDLAPEDVPVVVFGCSYPGSLAAYARAKYPASILGAVSSSSPVE 400 ASALFQAFDRVVQRVLPAACTAKVKAATAVVERRLFSGEEEAVKVAAKFGCGADVPMKTHDQRVALLYVIADAIAESVQY 480 NRQPTRPWIEEVCACFSETASEREETHDNKGDKREKRDNEEDLVNALAKAVQLMLAKLKMTCKDSNLLQLTDTRLGPQAS 560 ASARLWTWQSCAEYGYWQVAYKDSVRSHLIDLDWHMRMCNALFPLPSGSKFSTDVVAETNVWSGDKLVAGVGAATNIHFT 640 NGENDPWAPLSVTEVSPVVVDRQGLSSFTIQDGSHCNDFYAYGGTEPVAVTEAKARIQNAIRAWLEDFRERREQQKRKVD 720 PPLTKTFSATSVGGDSEL 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...P............................................................................ 320 ................................................................................ 400 ................................................................................ 480 ....................................P........................................... 560 ................................................................................ 640 ................................................................................ 720 .................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ TGME49_254010 5 --MAVSR|CR 0.107 . TGME49_254010 7 MAVSRCR|SA 0.156 . TGME49_254010 14 SASNPGR|RS 0.126 . TGME49_254010 15 ASNPGRR|SG 0.144 . TGME49_254010 20 RRSGVCR|SA 0.280 . TGME49_254010 23 GVCRSAR|LP 0.207 . TGME49_254010 27 SARLPLR|LL 0.093 . TGME49_254010 54 ATGWFFR|FL 0.132 . TGME49_254010 60 RFLPIQR|EE 0.069 . TGME49_254010 65 QREEHLR|LE 0.095 . TGME49_254010 70 LRLEGLK|AS 0.068 . TGME49_254010 80 TPPQAGR|HT 0.128 . TGME49_254010 83 QAGRHTR|EE 0.340 . TGME49_254010 89 REEESAR|AR 0.101 . TGME49_254010 91 EESARAR|GE 0.153 . TGME49_254010 95 RARGEEK|ER 0.063 . TGME49_254010 97 RGEEKER|DR 0.107 . TGME49_254010 99 EEKERDR|EA 0.140 . TGME49_254010 109 ASEGGEK|RR 0.063 . TGME49_254010 110 SEGGEKR|RD 0.182 . TGME49_254010 111 EGGEKRR|DG 0.315 . TGME49_254010 119 GGDGGLR|VI 0.081 . TGME49_254010 124 LRVIQEK|ET 0.083 . TGME49_254010 128 QEKETGR|GS 0.085 . TGME49_254010 133 GRGSDER|SE 0.141 . TGME49_254010 138 ERSEEGR|SS 0.282 . TGME49_254010 149 LLPGFLR|RF 0.071 . TGME49_254010 150 LPGFLRR|FL 0.140 . TGME49_254010 170 LSTDQER|RL 0.098 . TGME49_254010 171 STDQERR|LE 0.107 . TGME49_254010 184 TNEAGDR|ER 0.083 . TGME49_254010 186 EAGDRER|RE 0.086 . TGME49_254010 187 AGDRERR|EQ 0.450 . TGME49_254010 196 WGGEGSR|SR 0.109 . TGME49_254010 198 GEGSRSR|EA 0.156 . TGME49_254010 202 RSREADR|GE 0.107 . TGME49_254010 226 NPLVFNR|LG 0.107 . TGME49_254010 233 LGHDAWR|QK 0.081 . TGME49_254010 235 HDAWRQK|FY 0.084 . TGME49_254010 238 WRQKFYR|AK 0.150 . TGME49_254010 240 QKFYRAK|RK 0.067 . TGME49_254010 241 KFYRAKR|KR 0.368 . TGME49_254010 242 FYRAKRK|RR 0.098 . TGME49_254010 243 YRAKRKR|RS 0.466 . TGME49_254010 244 RAKRKRR|SS 0.827 *ProP* TGME49_254010 247 RKRRSSK|EE 0.203 . TGME49_254010 259 EVAGHAK|TE 0.066 . TGME49_254010 262 GHAKTER|QN 0.106 . TGME49_254010 273 LTDDAIR|PI 0.094 . TGME49_254010 291 LSSLEVR|QG 0.100 . TGME49_254010 312 LYALEHR|YY 0.137 . TGME49_254010 320 YGDSHPR|PD 0.092 . TGME49_254010 348 AFVAHVK|QQ 0.070 . TGME49_254010 382 SLAAYAR|AK 0.108 . TGME49_254010 384 AAYARAK|YP 0.078 . TGME49_254010 410 LFQAFDR|VV 0.128 . TGME49_254010 414 FDRVVQR|VL 0.100 . TGME49_254010 423 PAACTAK|VK 0.064 . TGME49_254010 425 ACTAKVK|AA 0.075 . TGME49_254010 433 ATAVVER|RL 0.104 . TGME49_254010 434 TAVVERR|LF 0.214 . TGME49_254010 444 GEEEAVK|VA 0.062 . TGME49_254010 448 AVKVAAK|FG 0.074 . TGME49_254010 458 GADVPMK|TH 0.061 . TGME49_254010 463 MKTHDQR|VA 0.082 . TGME49_254010 482 ESVQYNR|QP 0.068 . TGME49_254010 486 YNRQPTR|PW 0.105 . TGME49_254010 503 SETASER|EE 0.075 . TGME49_254010 510 EETHDNK|GD 0.060 . TGME49_254010 513 HDNKGDK|RE 0.059 . TGME49_254010 514 DNKGDKR|EK 0.199 . TGME49_254010 516 KGDKREK|RD 0.056 . TGME49_254010 517 GDKREKR|DN 0.730 *ProP* TGME49_254010 529 LVNALAK|AV 0.090 . TGME49_254010 537 VQLMLAK|LK 0.059 . TGME49_254010 539 LMLAKLK|MT 0.064 . TGME49_254010 543 KLKMTCK|DS 0.068 . TGME49_254010 554 LQLTDTR|LG 0.067 . TGME49_254010 564 QASASAR|LW 0.145 . TGME49_254010 582 YWQVAYK|DS 0.070 . TGME49_254010 586 AYKDSVR|SH 0.100 . TGME49_254010 597 DLDWHMR|MC 0.088 . TGME49_254010 610 PLPSGSK|FS 0.060 . TGME49_254010 626 NVWSGDK|LV 0.070 . TGME49_254010 662 SPVVVDR|QG 0.101 . TGME49_254010 694 VAVTEAK|AR 0.066 . TGME49_254010 696 VTEAKAR|IQ 0.111 . TGME49_254010 702 RIQNAIR|AW 0.083 . TGME49_254010 709 AWLEDFR|ER 0.072 . TGME49_254010 711 LEDFRER|RE 0.077 . TGME49_254010 712 EDFRERR|EQ 0.286 . TGME49_254010 716 ERREQQK|RK 0.064 . TGME49_254010 717 RREQQKR|KV 0.418 . TGME49_254010 718 REQQKRK|VD 0.091 . TGME49_254010 725 VDPPLTK|TF 0.060 . ____________________________^_________________

  • Fasta :-

    >TGME49_254010 CCTCTCTGAGAGAAACCCTCGAGTTTCCTTCTCTCGCTGCAGATTCGTGACCGTTCGTGC ATGTCGTCGAAAGCGGCTTCTTCCGGGGTTTCTCTGGCCACTGCGAGGAAGAAAAATCTG CAGTCGATGCGCAGCGCCTGCTCTCGAAGCGCTCGTCCGGTGCCCGACTGACACGAGAGA AACCGTGAAGTCCCAGCGTTCTGCGAAACATCTGCTGTCCAGATCTGTCGACAGTCAACG GAAGAACCAGAAGAAGAAAACGAGGAAGTCGAAGCGAAGAGAAAACAAGACAGAAGAAGA GAAAGAAGAAAGAATAAGGAAGAAGACGCGATTAAGAAAACCGAAGGATCGTTGTTTGAC GTTTGCGTTTCCTTCGCCTTCGGTCTGTGGGTGGCATCAACGAAGACGGCTTCTTCAAGA GAAGAGAAGAAACGAAAAAGGCATGCGTCAGGATTGAGAACGCCCTACTTTCTCTTTCTT CTTCTCGGATAATGGTCTCTTTCTTTCCACTTCCCGTTCCGTCCCCTGCGTCGCTCGACT TCAAGCAAATGCATCTGAAACTCCAACAAGTTGCGCACATGTGACCGCACACGTATACAT GCACACACACGTACCCATTTATATATATATATATATAAATATTTATATATTTATAAATAT ATATATATATGTATGTGTGTACGTGAGTACTCGAGTACTTCGATGTATGTACGCAGACCG TTGTGCAAGTTGAGTTGTCGAGGAAAGGGAGACTAAGAGAGAAGAAAGAAGAACTCAGGC GCTGGCCAAGAAGGCGCGAAGCCAGCAACGATGGCTGTTTCCCGTTGTCGTTCTGCCTCG AACCCAGGGAGACGCTCCGGCGTCTGCCGCTCCGCTCGCCTTCCTCTCCGTCTGCTGTTC ACTTGTACATGCGTTTTCGCGTCTCTGTTCTTCGCGGCGAATCCAGTGGAAGCTACAGGG TGGTTCTTCCGCTTCCTCCCCATCCAACGCGAAGAGCACTTGCGTCTCGAAGGCCTCAAG GCGTCAGGGACTCCGCCCCAAGCAGGCCGTCACACGCGAGAAGAAGAGAGCGCGAGAGCG AGAGGAGAAGAAAAGGAGAGAGACAGAGAAGCAAGCGCAAGCGAGGGAGGAGAGAAGCGG AGAGATGGCGGAGACGGCGGCTTGAGAGTGATTCAAGAGAAGGAAACAGGACGAGGAAGT GACGAGCGCTCCGAGGAAGGACGCAGCTCCTCGAACCTTCTGCCCGGTTTTCTGAGGCGC TTCCTTCCCTCTCCGAGCTTCCAGTCAGGCCAGGTGAATTTGTCTACCGACCAAGAAAGG AGGCTCGAGACAGACACAGACACGAACGAGGCAGGAGACCGCGAGCGCCGCGAACAGTGG GGAGGCGAAGGAAGCAGAAGCAGAGAAGCCGACAGAGGAGAACTCGAGGTTCAGGAAGGG TGGTTTCTCCAGCCCTTGGATCACGGCAACCCCCTCGTGTTCAACAGGCTCGGCCATGAC GCATGGCGACAGAAGTTTTACCGCGCAAAACGGAAGCGGCGGTCTTCAAAGGAAGAAGAG AGCACCGAAGTTGCAGGCCATGCAAAAACAGAAAGGCAGAACGACTCTCTGACAGATGAT GCCATTCGACCGATCTTCGTTTACATCGGCGGAGAGGGACCTCTGTCTTCCCTCGAAGTC AGACAAGGCCTCTTGGCAGAGATGGGCGACATTTTCGGTGCGTCTCTGTACGCCCTCGAG CATCGATACTACGGAGACTCTCACCCGCGCCCGGACTCGAGTGTCGTCAATCTTCAGTGG CTTACATCTCACCAGGCTCTCGGTGATCTGGCTGCCTTCGTCGCCCATGTGAAGCAGCAA GAAGCGGAAGAGCATCCGCAGGACCTCGCCCCTGAAGACGTCCCCGTCGTTGTCTTTGGA TGCTCCTATCCAGGCTCGCTGGCGGCGTACGCGCGCGCAAAGTATCCAGCGTCAATTCTC GGGGCTGTTTCTTCTTCATCGCCTGTCGAGGCCTCGGCTTTATTTCAAGCGTTTGATCGC GTTGTTCAGCGCGTCTTGCCCGCTGCATGCACTGCAAAGGTCAAGGCAGCGACGGCGGTC GTCGAACGGCGGCTCTTCTCCGGCGAAGAAGAAGCTGTTAAAGTTGCCGCGAAGTTTGGC TGTGGTGCCGACGTTCCCATGAAGACGCACGATCAACGTGTGGCGCTTCTGTATGTCATT GCAGACGCCATCGCCGAATCGGTGCAGTACAATCGCCAGCCGACGCGTCCGTGGATAGAG GAAGTCTGCGCTTGCTTCTCTGAGACGGCGAGCGAGAGAGAAGAGACACATGACAACAAG GGGGACAAACGCGAGAAGCGCGACAACGAAGAAGACCTCGTTAACGCGTTGGCAAAGGCT GTCCAGCTCATGCTGGCGAAACTGAAGATGACCTGCAAAGACTCCAACTTACTGCAGCTG ACAGATACTCGTCTAGGGCCTCAAGCCTCGGCGAGCGCGCGCCTCTGGACTTGGCAAAGC TGTGCCGAGTACGGTTACTGGCAAGTGGCTTACAAGGACAGCGTGCGGTCGCATCTGATT GACCTGGACTGGCACATGCGCATGTGCAACGCGCTCTTTCCTCTTCCCTCCGGAAGCAAA TTCAGCACGGACGTCGTCGCCGAGACGAATGTTTGGTCAGGAGACAAGCTGGTGGCTGGC GTCGGAGCGGCCACGAACATCCACTTCACAAATGGAGAAAACGATCCGTGGGCGCCACTG TCGGTTACAGAAGTTTCTCCCGTTGTCGTTGATCGTCAGGGATTGTCTTCCTTCACCATA CAGGACGGTAGCCACTGTAACGACTTTTACGCCTATGGAGGAACGGAGCCGGTGGCAGTG ACAGAGGCGAAGGCACGTATCCAAAATGCCATTCGCGCTTGGCTGGAAGATTTTCGAGAG AGACGCGAGCAGCAAAAACGAAAAGTAGACCCGCCGCTAACAAAGACATTTTCTGCAACC TCCGTGGGGGGGGACAGCGAGCTCTGACGGGTGTTGCCTTTCCCAAAAGCCACTGGCCTT TGCGAGTGGAAGCCAGCGAAGCTCGAGAACGGAGAAACGCGTCCTTCGCGCTCTCGCACT TGTCTCGGCTCTCGAACTCACGAGAAAGATCCGCGCACAGGTCAAACACGAGGCTCTCGA GAACTCTGCGGCGTCCTAGGCAAGGCTCTCCGGCAGGTGCAGCATGCAGGGCGCCTGTGT CTGGATCGGAGTGTTTGCGGGAGTTCTCAGTTGCTTCTATAGGAGAGCGCGAGAAGCTAG ATTCGAAGATGCCCGGGAGATAGGGCGATCTGAGGTTCAGATTTTTCAGTGCGTCTTTCA CTTTGGCATTCGTGGAGACAGGCTTTTCCTTCCCGTCGATCTATGCACCCTTTCGGGGGA GCGTCTGTGTCACTTCGCGTCCCTTGTCGAGGGCTTCCTTCCACTCGAAAAAATGGCATG CTTTTACACCACATTGACTTCGCTGAAGACAGCCGTAAATGTTGAGTGAGTATCATATCC TGCGGGCTTCACGTTTGCCTGGGTTCTTCGGCCGCTAGAACTTCTGAGTGAAAGAGAAAC GGTTCCCCTTCCTCTGCGTAGAGCAACCGAACTCAGACTTCGACTCGTGAGCATGTAGCA CGTCAACAGGTATATGCGGCTGTACTGAGTAGATGCGTCGAACCACTCACACACGGAACC GTACGTTTTTCGGTACACTAGTCCTTGTGTGGGGCACTTTAAAAAGCGATTTGAATGTGT ACATATCAATGAGTATTTCTTTGTCGACAGTTGAGCTTATGCGTACGTCTGTGTATCGAC GAGAACATGACTTGTGTCGATTTGCAGGCAGCAAGGACTGGATTTTTCCGGCGTTCAGTC ATCCACTTAACCCACTGGAGGCTTGCGTCTCCTCTAGCAACTGTCTTCTGTGTCTCAAAA CTGTTACAACGAGTCTGACTCGGTCGTGTTGTTCGTATGCAAACAAATTGACCTGCATGC AGAGCGAAAGTTCGTGTCTGCAGCTTCTTCCAGAATCGATTCGCCTAGCCAACGGCGGAC TGTGAAATCTTCGAGTGGTGTACAGTTGCGGAGCCACAAATCAAGTGGAGGGAGAGGTTC TGTCGCCAGCCAGGTTTTGTCTTGTGCACAAGTGACAGTGACATTCGAAATTTACAGCCA TGCCCTGCCACCACCAGGGTCGCACCTGGCAGATTCGTGTTTCTAGCCGCTTGCTAAGCA CAGAATCTGGTACCCCAAAGAAAGCAGGCATTTCTGTGTCCCCTCCGGTCTGTTTCTTCC GTGGATAATTCGAGCAACATGACTTTCCGTGTTTTCTGCTTGTAGTCGAGACGCGTCGGT GAGTATATTACTGTTCGATAAATAAATAAATAAATAAGTCTTTCAGATGTC
  • Download Fasta

  • Fasta :-

    MAVSRCRSASNPGRRSGVCRSARLPLRLLFTCTCVFASLFFAANPVEATGWFFRFLPIQR EEHLRLEGLKASGTPPQAGRHTREEESARARGEEKERDREASASEGGEKRRDGGDGGLRV IQEKETGRGSDERSEEGRSSSNLLPGFLRRFLPSPSFQSGQVNLSTDQERRLETDTDTNE AGDRERREQWGGEGSRSREADRGELEVQEGWFLQPLDHGNPLVFNRLGHDAWRQKFYRAK RKRRSSKEEESTEVAGHAKTERQNDSLTDDAIRPIFVYIGGEGPLSSLEVRQGLLAEMGD IFGASLYALEHRYYGDSHPRPDSSVVNLQWLTSHQALGDLAAFVAHVKQQEAEEHPQDLA PEDVPVVVFGCSYPGSLAAYARAKYPASILGAVSSSSPVEASALFQAFDRVVQRVLPAAC TAKVKAATAVVERRLFSGEEEAVKVAAKFGCGADVPMKTHDQRVALLYVIADAIAESVQY NRQPTRPWIEEVCACFSETASEREETHDNKGDKREKRDNEEDLVNALAKAVQLMLAKLKM TCKDSNLLQLTDTRLGPQASASARLWTWQSCAEYGYWQVAYKDSVRSHLIDLDWHMRMCN ALFPLPSGSKFSTDVVAETNVWSGDKLVAGVGAATNIHFTNGENDPWAPLSVTEVSPVVV DRQGLSSFTIQDGSHCNDFYAYGGTEPVAVTEAKARIQNAIRAWLEDFRERREQQKRKVD PPLTKTFSATSVGGDSEL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_254010197 SEGSRSREAD0.995unspTGME49_254010197 SEGSRSREAD0.995unspTGME49_254010197 SEGSRSREAD0.995unspTGME49_254010245 SRKRRSSKEE0.998unspTGME49_254010246 SKRRSSKEEE0.998unspTGME49_254010397 SVSSSSPVEA0.997unspTGME49_254010437 SRRLFSGEEE0.997unspTGME49_254010501 SSETASEREE0.995unspTGME49_254010102 SDREASASEG0.997unspTGME49_254010130 STGRGSDERS0.998unsp

TGME49_054010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India