TGME49_257110 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
TGME49_257110OTHER0.9996380.0001350.000228
No Results

  • Fasta :-

    >TGME49_257110 MSCTVVPAWRANSHACVVPKAEKKQPKAFIMPGKPDTQGRLTLAPRRAFLCRNRLQVSCD AIRFAASFRRCSQKLLPPACCAEPPTKLRNSEMTLSDAPTAPVALDTSWHSEWRWLSWLV KSRQTEESSFQQPDQYGNRGSSSRENVCSVPGIAAPPTSSASPSSLSTSTSACTSPASPP SSPDSRSAFLASACAAQAPLSQSSVASMSKPLSAAETQDKRIGVSATQNAAAEASSCAAL LPPSLSSCEEDRTPSAGGASPPRKKATPVSHVSPAPRGSEVETVSKSAESEESQRTASPT SPLLQFGDETLSWLQRQQMKLWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSGRG SAPPPHRGGYSPVYHTVWLCGNCFWSPFELRRVLLHELVHAFDFARAELSPENCRHVACT EIRAYNLSGQCSWWATKRWDEDQFQRIDPAFLRPRNRGLSTQGEKGDASVHAETREERCP HRDAAGSEQTAGERQLPLFGGSVAQVTRDCRTTAGEGEQQMGVSAQSFKHGGDPVFLSGN GAMPWQDTKRNRCLVHNALNSLRDHQQCKAPGIAEIAITDVFQRCLRDTWPFMVPPERDS KWRPSRIWREGSSDFFKK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_257110.fa Sequence name : TGME49_257110 Sequence length : 618 VALUES OF COMPUTED PARAMETERS Coef20 : 4.351 CoefTot : -0.839 ChDiff : 13 ZoneTo : 82 KR : 15 DE : 3 CleavSite : 71 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.794 0.166 0.631 MesoH : 0.361 0.264 -0.095 0.210 MuHd_075 : 37.483 21.590 11.621 7.157 MuHd_095 : 41.114 25.670 11.036 9.158 MuHd_100 : 42.899 24.853 10.644 9.680 MuHd_105 : 47.122 27.697 12.246 10.033 Hmax_075 : 14.500 9.800 6.812 4.950 Hmax_095 : 16.800 16.800 5.127 5.206 Hmax_100 : 16.800 16.000 3.698 5.660 Hmax_105 : 16.000 18.083 4.453 4.850 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3627 0.6373 DFMC : 0.3471 0.6529 This protein is probably imported in mitochondria. f(Ser) = 0.0610 f(Arg) = 0.1098 CMi = 0.27263 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 618 TGME49_257110 MSCTVVPAWRANSHACVVPKAEKKQPKAFIMPGKPDTQGRLTLAPRRAFLCRNRLQVSCDAIRFAASFRRCSQKLLPPAC 80 CAEPPTKLRNSEMTLSDAPTAPVALDTSWHSEWRWLSWLVKSRQTEESSFQQPDQYGNRGSSSRENVCSVPGIAAPPTSS 160 ASPSSLSTSTSACTSPASPPSSPDSRSAFLASACAAQAPLSQSSVASMSKPLSAAETQDKRIGVSATQNAAAEASSCAAL 240 LPPSLSSCEEDRTPSAGGASPPRKKATPVSHVSPAPRGSEVETVSKSAESEESQRTASPTSPLLQFGDETLSWLQRQQMK 320 LWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSGRGSAPPPHRGGYSPVYHTVWLCGNCFWSPFELRRVLLHELVH 400 AFDFARAELSPENCRHVACTEIRAYNLSGQCSWWATKRWDEDQFQRIDPAFLRPRNRGLSTQGEKGDASVHAETREERCP 480 HRDAAGSEQTAGERQLPLFGGSVAQVTRDCRTTAGEGEQQMGVSAQSFKHGGDPVFLSGNGAMPWQDTKRNRCLVHNALN 560 SLRDHQQCKAPGIAEIAITDVFQRCLRDTWPFMVPPERDSKWRPSRIWREGSSDFFKK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .......................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_257110 10 TVVPAWR|AN 0.101 . TGME49_257110 20 HACVVPK|AE 0.081 . TGME49_257110 23 VVPKAEK|KQ 0.056 . TGME49_257110 24 VPKAEKK|QP 0.093 . TGME49_257110 27 AEKKQPK|AF 0.071 . TGME49_257110 34 AFIMPGK|PD 0.081 . TGME49_257110 40 KPDTQGR|LT 0.106 . TGME49_257110 46 RLTLAPR|RA 0.081 . TGME49_257110 47 LTLAPRR|AF 0.085 . TGME49_257110 52 RRAFLCR|NR 0.099 . TGME49_257110 54 AFLCRNR|LQ 0.061 . TGME49_257110 63 VSCDAIR|FA 0.093 . TGME49_257110 69 RFAASFR|RC 0.112 . TGME49_257110 70 FAASFRR|CS 0.177 . TGME49_257110 74 FRRCSQK|LL 0.077 . TGME49_257110 87 CAEPPTK|LR 0.059 . TGME49_257110 89 EPPTKLR|NS 0.095 . TGME49_257110 114 SWHSEWR|WL 0.127 . TGME49_257110 121 WLSWLVK|SR 0.105 . TGME49_257110 123 SWLVKSR|QT 0.125 . TGME49_257110 139 PDQYGNR|GS 0.096 . TGME49_257110 144 NRGSSSR|EN 0.103 . TGME49_257110 186 PSSPDSR|SA 0.168 . TGME49_257110 210 SVASMSK|PL 0.086 . TGME49_257110 220 AAETQDK|RI 0.072 . TGME49_257110 221 AETQDKR|IG 0.099 . TGME49_257110 252 SSCEEDR|TP 0.121 . TGME49_257110 263 GGASPPR|KK 0.085 . TGME49_257110 264 GASPPRK|KA 0.145 . TGME49_257110 265 ASPPRKK|AT 0.100 . TGME49_257110 277 HVSPAPR|GS 0.147 . TGME49_257110 286 EVETVSK|SA 0.100 . TGME49_257110 295 ESEESQR|TA 0.094 . TGME49_257110 316 TLSWLQR|QQ 0.111 . TGME49_257110 320 LQRQQMK|LW 0.065 . TGME49_257110 328 WSFFALR|DW 0.103 . TGME49_257110 331 FALRDWR|VK 0.133 . TGME49_257110 333 LRDWRVK|TL 0.069 . TGME49_257110 359 CAQTSGR|GS 0.098 . TGME49_257110 367 SAPPPHR|GG 0.082 . TGME49_257110 391 WSPFELR|RV 0.092 . TGME49_257110 392 SPFELRR|VL 0.141 . TGME49_257110 406 HAFDFAR|AE 0.083 . TGME49_257110 415 LSPENCR|HV 0.097 . TGME49_257110 423 VACTEIR|AY 0.090 . TGME49_257110 437 CSWWATK|RW 0.065 . TGME49_257110 438 SWWATKR|WD 0.284 . TGME49_257110 446 DEDQFQR|ID 0.073 . TGME49_257110 453 IDPAFLR|PR 0.094 . TGME49_257110 455 PAFLRPR|NR 0.087 . TGME49_257110 457 FLRPRNR|GL 0.151 . TGME49_257110 465 LSTQGEK|GD 0.058 . TGME49_257110 475 SVHAETR|EE 0.078 . TGME49_257110 478 AETREER|CP 0.154 . TGME49_257110 482 EERCPHR|DA 0.184 . TGME49_257110 494 EQTAGER|QL 0.071 . TGME49_257110 508 SVAQVTR|DC 0.113 . TGME49_257110 511 QVTRDCR|TT 0.199 . TGME49_257110 529 VSAQSFK|HG 0.077 . TGME49_257110 549 MPWQDTK|RN 0.060 . TGME49_257110 550 PWQDTKR|NR 0.153 . TGME49_257110 552 QDTKRNR|CL 0.089 . TGME49_257110 563 NALNSLR|DH 0.087 . TGME49_257110 569 RDHQQCK|AP 0.092 . TGME49_257110 584 ITDVFQR|CL 0.097 . TGME49_257110 587 VFQRCLR|DT 0.232 . TGME49_257110 598 FMVPPER|DS 0.086 . TGME49_257110 601 PPERDSK|WR 0.087 . TGME49_257110 603 ERDSKWR|PS 0.118 . TGME49_257110 606 SKWRPSR|IW 0.352 . TGME49_257110 609 RPSRIWR|EG 0.369 . TGME49_257110 617 GSSDFFK|K- 0.079 . TGME49_257110 618 SSDFFKK|-- 0.142 . ____________________________^_________________

  • Fasta :-

    >TGME49_257110 ATGTCGTGCACGGTCGTACCTGCGTGGCGAGCGAATTCCCATGCCTGTGTAGTTCCTAAA GCAGAAAAAAAACAACCGAAGGCCTTTATCATGCCTGGGAAACCCGATACTCAGGGGCGG CTCACGCTCGCCCCTCGTCGCGCCTTTCTCTGTAGAAACCGGCTCCAGGTTTCCTGCGAT GCCATTCGCTTCGCTGCTTCCTTTCGTCGGTGTTCGCAAAAGCTCTTGCCTCCGGCCTGT TGTGCGGAACCTCCCACAAAGTTGAGAAACTCTGAAATGACTCTTTCTGACGCTCCCACG GCCCCCGTGGCGCTCGACACCTCCTGGCACTCCGAGTGGAGGTGGCTTTCATGGCTTGTT AAATCGCGTCAGACTGAAGAGAGCTCCTTTCAACAGCCCGATCAATATGGAAATCGTGGT TCATCAAGCCGTGAGAATGTCTGCAGTGTCCCAGGAATCGCTGCCCCGCCGACGTCGTCT GCCTCTCCCTCTTCTCTGTCTACATCAACTTCTGCCTGCACCTCTCCTGCCTCCCCGCCT TCTTCACCAGACAGCCGTTCCGCTTTCCTCGCGAGCGCCTGCGCAGCTCAGGCACCACTT TCTCAGTCCTCTGTTGCATCCATGTCAAAACCTCTCTCGGCCGCGGAAACGCAAGACAAG CGAATCGGCGTCTCTGCGACGCAGAACGCAGCAGCAGAGGCGTCCTCCTGTGCCGCTCTC TTGCCTCCGTCTTTGTCGAGCTGCGAGGAGGATCGTACCCCCTCCGCAGGTGGCGCATCA CCTCCTAGGAAGAAGGCAACACCGGTTTCGCATGTTTCACCTGCGCCTCGGGGCTCGGAG GTGGAGACCGTTTCCAAGTCCGCAGAAAGCGAGGAGTCGCAGCGGACAGCTTCGCCGACT TCCCCGCTTCTCCAGTTTGGCGACGAGACGCTGTCGTGGCTGCAGCGTCAACAAATGAAA CTTTGGAGTTTCTTCGCGCTTCGCGACTGGCGAGTCAAGACGCTCGTCCACGCACTCTCC GCCATGGGAGCTCCCGTCGACCTCATCGTGGTGGACTGTGCCCAAACCTCAGGTCGCGGA TCTGCTCCCCCTCCACACCGGGGAGGGTACTCGCCAGTCTACCACACAGTGTGGCTTTGC GGCAACTGCTTTTGGTCTCCCTTCGAGCTGCGGCGGGTCCTGCTTCACGAGCTCGTGCAT GCATTTGACTTCGCACGGGCTGAACTGTCCCCAGAGAACTGCAGACACGTCGCATGTACG GAGATCCGCGCGTACAACCTCAGCGGCCAGTGCAGCTGGTGGGCTACGAAGCGGTGGGAC GAAGACCAGTTTCAGCGCATCGATCCAGCGTTTCTTCGTCCGCGAAACCGGGGTCTCTCG ACGCAAGGGGAAAAGGGCGACGCGTCTGTGCATGCAGAAACGCGTGAGGAGAGATGCCCA CACCGCGACGCCGCGGGGAGCGAGCAGACGGCTGGAGAGCGACAGCTGCCGCTCTTTGGG GGGAGCGTGGCGCAGGTGACAAGAGACTGTAGGACCACCGCGGGAGAAGGCGAACAGCAG ATGGGGGTTTCCGCTCAAAGCTTCAAACATGGGGGGGACCCGGTGTTCCTTTCGGGGAAC GGGGCAATGCCCTGGCAAGACACGAAGCGAAATCGGTGTCTTGTTCACAACGCGCTGAAC TCGCTGCGAGATCACCAACAATGCAAAGCCCCAGGGATCGCGGAAATCGCGATCACAGAC GTCTTCCAGCGGTGCTTGAGGGATACGTGGCCTTTCATGGTACCTCCCGAGCGCGACAGC AAGTGGCGACCATCTCGCATTTGGCGTGAGGGTTCGTCTGACTTTTTCAAGAAATGA
  • Download Fasta

  • Fasta :-

    MSCTVVPAWRANSHACVVPKAEKKQPKAFIMPGKPDTQGRLTLAPRRAFLCRNRLQVSCD AIRFAASFRRCSQKLLPPACCAEPPTKLRNSEMTLSDAPTAPVALDTSWHSEWRWLSWLV KSRQTEESSFQQPDQYGNRGSSSRENVCSVPGIAAPPTSSASPSSLSTSTSACTSPASPP SSPDSRSAFLASACAAQAPLSQSSVASMSKPLSAAETQDKRIGVSATQNAAAEASSCAAL LPPSLSSCEEDRTPSAGGASPPRKKATPVSHVSPAPRGSEVETVSKSAESEESQRTASPT SPLLQFGDETLSWLQRQQMKLWSFFALRDWRVKTLVHALSAMGAPVDLIVVDCAQTSGRG SAPPPHRGGYSPVYHTVWLCGNCFWSPFELRRVLLHELVHAFDFARAELSPENCRHVACT EIRAYNLSGQCSWWATKRWDEDQFQRIDPAFLRPRNRGLSTQGEKGDASVHAETREERCP HRDAAGSEQTAGERQLPLFGGSVAQVTRDCRTTAGEGEQQMGVSAQSFKHGGDPVFLSGN GAMPWQDTKRNRCLVHNALNSLRDHQQCKAPGIAEIAITDVFQRCLRDTWPFMVPPERDS KWRPSRIWREGSSDFFKK

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_257110181 SASPPSSPDS0.995unspTGME49_257110181 SASPPSSPDS0.995unspTGME49_257110181 SASPPSSPDS0.995unspTGME49_257110213 SSKPLSAAET0.99unspTGME49_257110247 SPSLSSCEED0.995unspTGME49_257110279 SAPRGSEVET0.996unspTGME49_257110287 STVSKSAESE0.994unspTGME49_257110290 SKSAESEESQ0.997unspTGME49_257110298 SQRTASPTSP0.996unspTGME49_257110460 SNRGLSTQGE0.993unspTGME49_25711072 SFRRCSQKLL0.994unspTGME49_257110142 SNRGSSSREN0.998unsp

TGME49_057110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India