TGME49_257730 | methionine aminopeptidase, type i, putative

_IDPredictionOTHERSPmTPCS_Position
TGME49_257730OTHER0.8388680.0005700.160562
No Results

  • Fasta :-

    >TGME49_257730 MWSFTRASGRSVRSSLSESFHRSSVAEPRANPSLRLLSAWSASLSSASRIVSPFPSKSEP SGSSVSSAFGSRATVPRRTQQSRVSTARKPVPAARPPPSSCLISEGGIARKQLRTNSLEP AQACRSQLFVKPLRPRTCDRSRQINLTRPFHRCFFSTASSPTKPGGGSASSGPLLTPKLV LRRDESVKRRFPHTLVEGQYAVLPAHPIPPSIPRPPYARCSTGQADRGFDTSDTPGEVQT PDALKKIRAAATVAANALKLGLDAAREGVTTEDLDKIVHEYIVSVGAYPAAVNFHNFPKA VCASVNEAVCHGIPDLRPLQDGDIVTLDCTAYVDGFFGDCAGTAMVGSVTEAHRTLVETT KDCLDEAIKLLYPGLPIKEVGRCITALAEQRGFSVVREFCGHFIGRKMHLPPLICHAYPN DTQGVFRVGQTFTIEPILCEGASDLFTWNDGWTIVTQDGGRAAQFEHTILMTPEGAEVLT KPTL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_257730.fa Sequence name : TGME49_257730 Sequence length : 484 VALUES OF COMPUTED PARAMETERS Coef20 : 5.092 CoefTot : 1.090 ChDiff : 12 ZoneTo : 17 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.776 1.059 0.085 0.475 MesoH : -0.327 0.462 -0.227 0.282 MuHd_075 : 11.579 9.301 2.007 3.268 MuHd_095 : 43.056 24.264 10.504 9.048 MuHd_100 : 39.114 19.345 8.311 8.498 MuHd_105 : 31.971 11.296 5.432 6.985 Hmax_075 : 10.700 6.500 0.379 3.090 Hmax_095 : 15.300 10.800 1.865 4.290 Hmax_100 : 14.900 10.400 1.586 3.900 Hmax_105 : 11.783 6.067 0.498 3.803 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0538 0.9462 DFMC : 0.1229 0.8771 This protein is probably imported in chloroplast. f(Ser) = 0.3529 f(Arg) = 0.1765 CMi = 1.11317 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 484 TGME49_257730 MWSFTRASGRSVRSSLSESFHRSSVAEPRANPSLRLLSAWSASLSSASRIVSPFPSKSEPSGSSVSSAFGSRATVPRRTQ 80 QSRVSTARKPVPAARPPPSSCLISEGGIARKQLRTNSLEPAQACRSQLFVKPLRPRTCDRSRQINLTRPFHRCFFSTASS 160 PTKPGGGSASSGPLLTPKLVLRRDESVKRRFPHTLVEGQYAVLPAHPIPPSIPRPPYARCSTGQADRGFDTSDTPGEVQT 240 PDALKKIRAAATVAANALKLGLDAAREGVTTEDLDKIVHEYIVSVGAYPAAVNFHNFPKAVCASVNEAVCHGIPDLRPLQ 320 DGDIVTLDCTAYVDGFFGDCAGTAMVGSVTEAHRTLVETTKDCLDEAIKLLYPGLPIKEVGRCITALAEQRGFSVVREFC 400 GHFIGRKMHLPPLICHAYPNDTQGVFRVGQTFTIEPILCEGASDLFTWNDGWTIVTQDGGRAAQFEHTILMTPEGAEVLT 480 KPTL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_257730 6 -MWSFTR|AS 0.109 . TGME49_257730 10 FTRASGR|SV 0.283 . TGME49_257730 13 ASGRSVR|SS 0.409 . TGME49_257730 22 LSESFHR|SS 0.131 . TGME49_257730 29 SSVAEPR|AN 0.090 . TGME49_257730 35 RANPSLR|LL 0.127 . TGME49_257730 49 SLSSASR|IV 0.145 . TGME49_257730 57 VSPFPSK|SE 0.065 . TGME49_257730 72 SSAFGSR|AT 0.103 . TGME49_257730 77 SRATVPR|RT 0.179 . TGME49_257730 78 RATVPRR|TQ 0.105 . TGME49_257730 83 RRTQQSR|VS 0.094 . TGME49_257730 88 SRVSTAR|KP 0.095 . TGME49_257730 89 RVSTARK|PV 0.147 . TGME49_257730 95 KPVPAAR|PP 0.083 . TGME49_257730 110 SEGGIAR|KQ 0.073 . TGME49_257730 111 EGGIARK|QL 0.080 . TGME49_257730 114 IARKQLR|TN 0.107 . TGME49_257730 125 EPAQACR|SQ 0.109 . TGME49_257730 131 RSQLFVK|PL 0.069 . TGME49_257730 134 LFVKPLR|PR 0.070 . TGME49_257730 136 VKPLRPR|TC 0.089 . TGME49_257730 140 RPRTCDR|SR 0.142 . TGME49_257730 142 RTCDRSR|QI 0.092 . TGME49_257730 148 RQINLTR|PF 0.103 . TGME49_257730 152 LTRPFHR|CF 0.100 . TGME49_257730 163 TASSPTK|PG 0.084 . TGME49_257730 178 GPLLTPK|LV 0.067 . TGME49_257730 182 TPKLVLR|RD 0.094 . TGME49_257730 183 PKLVLRR|DE 0.151 . TGME49_257730 188 RRDESVK|RR 0.064 . TGME49_257730 189 RDESVKR|RF 0.129 . TGME49_257730 190 DESVKRR|FP 0.255 . TGME49_257730 214 IPPSIPR|PP 0.087 . TGME49_257730 219 PRPPYAR|CS 0.130 . TGME49_257730 227 STGQADR|GF 0.106 . TGME49_257730 245 QTPDALK|KI 0.064 . TGME49_257730 246 TPDALKK|IR 0.104 . TGME49_257730 248 DALKKIR|AA 0.113 . TGME49_257730 259 VAANALK|LG 0.059 . TGME49_257730 266 LGLDAAR|EG 0.075 . TGME49_257730 276 TTEDLDK|IV 0.079 . TGME49_257730 299 NFHNFPK|AV 0.117 . TGME49_257730 317 HGIPDLR|PL 0.086 . TGME49_257730 354 SVTEAHR|TL 0.072 . TGME49_257730 361 TLVETTK|DC 0.068 . TGME49_257730 369 CLDEAIK|LL 0.065 . TGME49_257730 378 YPGLPIK|EV 0.093 . TGME49_257730 382 PIKEVGR|CI 0.107 . TGME49_257730 391 TALAEQR|GF 0.101 . TGME49_257730 397 RGFSVVR|EF 0.095 . TGME49_257730 406 CGHFIGR|KM 0.080 . TGME49_257730 407 GHFIGRK|MH 0.067 . TGME49_257730 427 DTQGVFR|VG 0.078 . TGME49_257730 461 VTQDGGR|AA 0.084 . TGME49_257730 481 GAEVLTK|PT 0.066 . ____________________________^_________________

  • Fasta :-

    >TGME49_257730 ATGTGGAGCTTTACCAGAGCGTCTGGACGGTCCGTCCGTTCGTCCTTATCCGAATCTTTT CATCGCAGCAGCGTGGCAGAGCCCCGTGCAAACCCTTCACTGCGGCTGTTGTCCGCGTGG TCTGCTTCGCTTTCCTCCGCTTCGAGAATCGTTTCGCCGTTTCCGAGCAAGTCAGAGCCC TCAGGAAGTTCCGTTTCGTCGGCATTCGGTTCACGAGCAACCGTACCACGAAGAACTCAA CAGTCGCGTGTTTCGACAGCTAGAAAGCCCGTCCCCGCCGCTCGTCCTCCACCCTCCAGC TGCTTGATCAGCGAAGGCGGCATTGCGAGGAAACAACTCCGCACAAATTCTCTCGAACCT GCCCAAGCTTGCAGGAGCCAGCTGTTTGTCAAGCCCTTGCGGCCTCGAACTTGCGACCGC AGTAGGCAGATTAACCTTACACGTCCATTCCACCGATGTTTCTTCTCGACTGCTTCCTCG CCAACAAAGCCAGGAGGAGGCTCCGCTTCCAGCGGGCCGCTCCTCACTCCCAAGCTCGTC TTGCGTCGAGACGAATCAGTCAAACGCCGTTTTCCGCACACTCTCGTTGAAGGCCAGTAT GCGGTGCTTCCAGCACATCCAATTCCCCCCTCGATTCCGCGCCCTCCGTACGCAAGATGT TCCACGGGACAAGCCGACAGAGGATTCGACACATCCGACACACCGGGAGAAGTTCAGACA CCGGACGCTCTTAAGAAAATCCGAGCAGCTGCCACCGTGGCGGCAAATGCTCTGAAGCTC GGTCTCGACGCTGCGCGAGAGGGGGTGACTACTGAGGACCTCGACAAGATTGTGCACGAG TACATTGTTAGTGTAGGGGCCTATCCTGCAGCAGTGAACTTCCACAACTTCCCCAAAGCT GTCTGCGCCTCCGTCAATGAGGCTGTTTGCCATGGAATTCCCGACCTCCGTCCCCTCCAA GATGGAGACATCGTCACACTCGACTGCACTGCATATGTCGATGGCTTCTTCGGAGACTGC GCAGGGACTGCGATGGTCGGCAGTGTCACTGAAGCTCACCGTACGCTCGTTGAAACGACA AAAGACTGTTTGGACGAGGCCATCAAGCTTCTGTACCCGGGGTTGCCCATCAAGGAGGTC GGCCGATGCATCACAGCTCTTGCGGAGCAGAGAGGATTCTCCGTTGTTCGCGAGTTCTGC GGCCACTTTATCGGGAGAAAAATGCACCTTCCACCTTTGATTTGTCACGCCTATCCAAAC GATACACAGGGTGTTTTCCGTGTCGGTCAAACTTTCACCATCGAGCCAATTCTCTGCGAG GGTGCCTCGGACCTCTTCACGTGGAACGACGGCTGGACCATTGTGACCCAAGACGGCGGT CGAGCAGCACAGTTTGAACACACGATCCTAATGACACCCGAGGGAGCGGAGGTGTTAACG AAGCCGACCCTTTGA
  • Download Fasta

  • Fasta :-

    MWSFTRASGRSVRSSLSESFHRSSVAEPRANPSLRLLSAWSASLSSASRIVSPFPSKSEP SGSSVSSAFGSRATVPRRTQQSRVSTARKPVPAARPPPSSCLISEGGIARKQLRTNSLEP AQACRSQLFVKPLRPRTCDRSRQINLTRPFHRCFFSTASSPTKPGGGSASSGPLLTPKLV LRRDESVKRRFPHTLVEGQYAVLPAHPIPPSIPRPPYARCSTGQADRGFDTSDTPGEVQT PDALKKIRAAATVAANALKLGLDAAREGVTTEDLDKIVHEYIVSVGAYPAAVNFHNFPKA VCASVNEAVCHGIPDLRPLQDGDIVTLDCTAYVDGFFGDCAGTAMVGSVTEAHRTLVETT KDCLDEAIKLLYPGLPIKEVGRCITALAEQRGFSVVREFCGHFIGRKMHLPPLICHAYPN DTQGVFRVGQTFTIEPILCEGASDLFTWNDGWTIVTQDGGRAAQFEHTILMTPEGAEVLT KPTL

    No Results
  • title: active site
  • coordinates: H311,D328,D339,H402,E435,E466
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_25773024 SFHRSSVAEP0.996unspTGME49_25773024 SFHRSSVAEP0.996unspTGME49_25773024 SFHRSSVAEP0.996unspTGME49_25773085 SQSRVSTARK0.991unspTGME49_257730186 SRRDESVKRR0.996unspTGME49_257730394 SQRGFSVVRE0.993unspTGME49_25773011 SASGRSVRSS0.991unspTGME49_25773015 SSVRSSLSES0.998unsp

TGME49_057730      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India