TGME49_258780 | OTU family cysteine protease

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_IDPredictionOTHERSPmTPCS_Position
TGME49_258780OTHER0.9999590.0000060.000036
No Results

  • Fasta :-

    >TGME49_258780 MPLCRNSAPSPHDGERAESPRDDTHEITHRFSRLRLPSSLASHERTDAVPAMLPPSPRDL IVVDRLSRKVNVSSFATVMKAYLILKNRVAAQRANKEFQEGQRRVLPLWGRRSSRVALES PSHSRGKLGSLKGLSETATRGRTDRETQRGSRLGPREYAESLPRDPASPKPPQRPLSDGE SFDAWTPDAPDGVRAVGAVGRMKACQSLLEQRLGFLGFKSVHIAGDGNCQFRSCSWNMFG SEEHHRVVRARAVQHMREHREEYGVFFEADDFEKYLKNMSRSGTWGDELSVRAIADSFQC TIHIITSTDTNWYLRYDPQGAAGKNVEAVRHIFLTYISPIHYNAFTIDDLSASDSETTGA QRG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/TGME49_258780.fa Sequence name : TGME49_258780 Sequence length : 363 VALUES OF COMPUTED PARAMETERS Coef20 : 3.120 CoefTot : -0.510 ChDiff : 7 ZoneTo : 12 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.871 1.065 -0.081 0.500 MesoH : -0.891 -0.069 -0.467 0.129 MuHd_075 : 12.443 11.417 4.832 4.405 MuHd_095 : 18.165 8.061 4.796 4.375 MuHd_100 : 26.029 12.817 7.496 5.675 MuHd_105 : 31.707 17.186 9.880 5.941 Hmax_075 : -5.800 1.300 -2.233 1.110 Hmax_095 : -4.400 -1.000 -2.505 0.810 Hmax_100 : -1.400 -0.800 -0.542 1.220 Hmax_105 : 10.033 7.117 3.054 2.485 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9261 0.0739 DFMC : 0.9181 0.0819
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 363 TGME49_258780 MPLCRNSAPSPHDGERAESPRDDTHEITHRFSRLRLPSSLASHERTDAVPAMLPPSPRDLIVVDRLSRKVNVSSFATVMK 80 AYLILKNRVAAQRANKEFQEGQRRVLPLWGRRSSRVALESPSHSRGKLGSLKGLSETATRGRTDRETQRGSRLGPREYAE 160 SLPRDPASPKPPQRPLSDGESFDAWTPDAPDGVRAVGAVGRMKACQSLLEQRLGFLGFKSVHIAGDGNCQFRSCSWNMFG 240 SEEHHRVVRARAVQHMREHREEYGVFFEADDFEKYLKNMSRSGTWGDELSVRAIADSFQCTIHIITSTDTNWYLRYDPQG 320 AAGKNVEAVRHIFLTYISPIHYNAFTIDDLSASDSETTGAQRG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ TGME49_258780 5 --MPLCR|NS 0.092 . TGME49_258780 16 SPHDGER|AE 0.122 . TGME49_258780 21 ERAESPR|DD 0.183 . TGME49_258780 30 THEITHR|FS 0.098 . TGME49_258780 33 ITHRFSR|LR 0.193 . TGME49_258780 35 HRFSRLR|LP 0.087 . TGME49_258780 45 SLASHER|TD 0.081 . TGME49_258780 58 MLPPSPR|DL 0.129 . TGME49_258780 65 DLIVVDR|LS 0.094 . TGME49_258780 68 VVDRLSR|KV 0.183 . TGME49_258780 69 VDRLSRK|VN 0.079 . TGME49_258780 80 SFATVMK|AY 0.066 . TGME49_258780 86 KAYLILK|NR 0.058 . TGME49_258780 88 YLILKNR|VA 0.088 . TGME49_258780 93 NRVAAQR|AN 0.100 . TGME49_258780 96 AAQRANK|EF 0.146 . TGME49_258780 103 EFQEGQR|RV 0.080 . TGME49_258780 104 FQEGQRR|VL 0.089 . TGME49_258780 111 VLPLWGR|RS 0.078 . TGME49_258780 112 LPLWGRR|SS 0.208 . TGME49_258780 115 WGRRSSR|VA 0.320 . TGME49_258780 125 ESPSHSR|GK 0.100 . TGME49_258780 127 PSHSRGK|LG 0.071 . TGME49_258780 132 GKLGSLK|GL 0.066 . TGME49_258780 140 LSETATR|GR 0.097 . TGME49_258780 142 ETATRGR|TD 0.087 . TGME49_258780 145 TRGRTDR|ET 0.395 . TGME49_258780 149 TDRETQR|GS 0.101 . TGME49_258780 152 ETQRGSR|LG 0.119 . TGME49_258780 156 GSRLGPR|EY 0.100 . TGME49_258780 164 YAESLPR|DP 0.072 . TGME49_258780 170 RDPASPK|PP 0.062 . TGME49_258780 174 SPKPPQR|PL 0.193 . TGME49_258780 194 DAPDGVR|AV 0.156 . TGME49_258780 201 AVGAVGR|MK 0.083 . TGME49_258780 203 GAVGRMK|AC 0.068 . TGME49_258780 212 QSLLEQR|LG 0.077 . TGME49_258780 219 LGFLGFK|SV 0.108 . TGME49_258780 232 DGNCQFR|SC 0.192 . TGME49_258780 246 GSEEHHR|VV 0.125 . TGME49_258780 249 EHHRVVR|AR 0.255 . TGME49_258780 251 HRVVRAR|AV 0.274 . TGME49_258780 257 RAVQHMR|EH 0.094 . TGME49_258780 260 QHMREHR|EE 0.265 . TGME49_258780 274 EADDFEK|YL 0.061 . TGME49_258780 277 DFEKYLK|NM 0.064 . TGME49_258780 281 YLKNMSR|SG 0.128 . TGME49_258780 292 GDELSVR|AI 0.120 . TGME49_258780 315 DTNWYLR|YD 0.095 . TGME49_258780 324 PQGAAGK|NV 0.099 . TGME49_258780 330 KNVEAVR|HI 0.086 . TGME49_258780 362 ETTGAQR|G- 0.079 . ____________________________^_________________

  • Fasta :-

    >TGME49_258780 ATGCCGCTCTGTCGGAACTCGGCGCCGTCACCTCACGACGGGGAGCGGGCGGAGAGTCCG AGAGATGACACACACGAAATAACGCATAGATTTTCCCGGCTGCGGCTGCCCTCGTCACTG GCGAGCCACGAACGGACAGACGCAGTGCCGGCGATGTTGCCGCCGAGCCCGCGAGACCTG ATTGTGGTGGATCGACTGTCGCGGAAAGTGAATGTGAGTAGTTTCGCCACAGTCATGAAG GCGTACCTGATTCTGAAGAATCGCGTAGCTGCGCAGAGAGCGAACAAGGAATTTCAGGAG GGGCAGAGGCGCGTACTTCCGCTCTGGGGCAGGAGAAGCAGTCGCGTGGCTCTGGAGAGC CCGTCGCATAGCCGCGGCAAGCTCGGTAGTCTAAAGGGTTTGTCAGAGACGGCAACGCGC GGAAGGACAGACCGAGAAACGCAGCGCGGGTCCCGTCTTGGCCCACGCGAGTACGCTGAG AGCTTGCCCCGGGATCCGGCTTCCCCAAAACCGCCGCAGCGCCCGTTGAGTGATGGCGAG TCGTTTGACGCCTGGACTCCCGACGCTCCTGACGGTGTCAGAGCTGTCGGGGCTGTCGGG AGAATGAAGGCATGCCAGTCGCTGCTTGAACAGCGCCTAGGGTTTTTGGGATTCAAGAGC GTGCACATTGCGGGCGACGGGAACTGCCAGTTCCGGTCCTGCTCCTGGAACATGTTTGGA TCCGAGGAACACCACAGAGTTGTGCGCGCGCGGGCTGTGCAGCACATGCGCGAACACAGA GAGGAGTACGGCGTCTTCTTCGAGGCTGACGACTTTGAAAAGTACCTGAAGAACATGTCG CGATCCGGGACCTGGGGAGACGAACTGTCTGTTCGTGCCATAGCCGACAGTTTCCAGTGT ACCATCCACATCATCACCTCCACAGATACGAACTGGTATCTGCGATACGACCCCCAGGGT GCTGCGGGAAAAAATGTGGAAGCCGTCAGGCACATCTTCCTCACGTACATCTCACCCATA CACTACAACGCCTTCACCATCGACGACCTTTCGGCCTCCGACTCGGAAACGACGGGCGCA CAACGAGGGTGAAGCGAGTTTGTGCATGCCTGTGACGTACCGCGACTCGACTGACGCCTG GATGCCATTCTCATTTCCATCGCGTCTCGTGACTCTCTCCGTGACAACGGATTTGCAACG CGTTTTTCGTGCACTGGAAGGTGACAGCGGTCAAAATGAGGAAAGTGGGGTTTTGGGGTT TCCCAGTAGTGATGCAGTGCTCGTCCCGCCCTTGCGTCATTTGCTTCTTCGTATTTGTCT GTGAGACCGACGGAAATCTTATTTTCAAGTGAGTGGGTGAGACTTCATTCGGACATTTCT ATGTTAGCGCATCAACCCCAGCAGTTGATGTGATTAACAGTGAAGTTTTTCACGTGTTCG
  • Download Fasta

  • Fasta :-

    MPLCRNSAPSPHDGERAESPRDDTHEITHRFSRLRLPSSLASHERTDAVPAMLPPSPRDL IVVDRLSRKVNVSSFATVMKAYLILKNRVAAQRANKEFQEGQRRVLPLWGRRSSRVALES PSHSRGKLGSLKGLSETATRGRTDRETQRGSRLGPREYAESLPRDPASPKPPQRPLSDGE SFDAWTPDAPDGVRAVGAVGRMKACQSLLEQRLGFLGFKSVHIAGDGNCQFRSCSWNMFG SEEHHRVVRARAVQHMREHREEYGVFFEADDFEKYLKNMSRSGTWGDELSVRAIADSFQC TIHIITSTDTNWYLRYDPQGAAGKNVEAVRHIFLTYISPIHYNAFTIDDLSASDSETTGA QRG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
TGME49_25878032 STHRFSRLRL0.992unspTGME49_25878032 STHRFSRLRL0.992unspTGME49_25878032 STHRFSRLRL0.992unspTGME49_25878042 SSSLASHERT0.997unspTGME49_25878056 SMLPPSPRDL0.997unspTGME49_25878067 SVDRLSRKVN0.995unspTGME49_258780168 SRDPASPKPP0.995unspTGME49_258780177 SQRPLSDGES0.998unspTGME49_258780351 SIDDLSASDS0.997unspTGME49_258780353 SDLSASDSET0.994unspTGME49_25878010 SNSAPSPHDG0.998unspTGME49_25878019 SERAESPRDD0.998unsp

TGME49_058780      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India